RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 CEP70Q8NHQ1 597 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 AASDHPPTQ9NRN7 309 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 DSEQ9UL01 958 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 MAP7D3Q8IWC1 876 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 VCX3BQ9H321 246 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 VCX3AQ9NNX9 186 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 SPTLC3Q9NUV7 552 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 PDHBP11177 359 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 ZNF75DP51815 510 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 CCDC15Q0P6D6 951 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 TNIP1Q15025 636 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 SLC44A4Q53GD3 710 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 NUTM2DQ5VT03 806 aaPredicted RBP10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 SNX21Q969T3 373 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 CCDC47Q96A33 483 aaKnown RBP10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 MPP4Q96JB8 637 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 TRAK1Q9UPV9 953 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 KDM2BQ8NHM5 1336 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 STK38Q15208 465 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 CCDC178Q5BJE1 867 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 ZC3H12AQ5D1E8 599 aaKnown RBP10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 GPR161Q8N6U8 529 aaKnown RBP10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 FAM71BQ8TC56 605 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 SLC4A7Q9Y6M7 1214 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 BRD4O60885 1362 aaPredicted RBP10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 MYL1P05976 194 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 MPP3Q13368 585 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 LONRF3Q496Y0 759 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 LRRC31Q6UY01 552 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 KIF1BPQ96EK5 621 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 FGD4Q96M96 766 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 HDAC6Q9UBN7 1215 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 USP27XA6NNY8 438 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 CTCFP49711 727 aaPredicted RBP10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 PDE3AQ14432 1141 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 HIBCHQ6NVY1 386 aaPredicted RBP10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 EIF3AQ14152 1382 aaKnown RBP10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 SYT1P21579 422 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 UBE2HP62256 183 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 TSNAXIP1Q2TAA8 658 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 TTC14Q96N46 770 aa10.15□□□□□ -0.78
GTF2A1-203ENST00000553612 KRT38O76015 456 aa10.15□□□□□ -0.79
GTF2A1-203ENST00000553612 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.15□□□□□ -0.791e-30■■■■■ 65.7
GTF2A1-203ENST00000553612 SPECC1LQ69YQ0 1117 aa10.15□□□□□ -0.79
GTF2A1-203ENST00000553612 FLCNQ8NFG4 579 aa10.15□□□□□ -0.79
GTF2A1-203ENST00000553612 TSPAN18Q96SJ8 248 aa10.15□□□□□ -0.79
GTF2A1-203ENST00000553612 PLVAPQ9BX97 442 aa10.15□□□□□ -0.79
GTF2A1-203ENST00000553612 PARD6BQ9BYG5 372 aa10.15□□□□□ -0.79
GTF2A1-203ENST00000553612 OPA1O60313 960 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 APOBRQ0VD83 1088 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 CCDC57Q2TAC2 916 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 SWT1Q5T5J6 900 aaKnown RBP10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 DDX46Q7L014 1031 aaKnown RBP10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 ANKRD23Q86SG2 305 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 CCDC144CPQ8IYA2 1237 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 CCDC150Q8NCX0 1101 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 TMX3Q96JJ7 454 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 JAKMIP1Q96N16 626 aaKnown RBP10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 OSBPL9Q96SU4 736 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 EXOC1Q9NV70 894 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 SKOR1P84550 965 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 RCN1Q15293 331 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 LRRFIP1Q32MZ4 808 aaKnown RBP10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 SPATA24Q86W54 205 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 LTV1Q96GA3 475 aaPredicted RBP10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 NUB1Q9Y5A7 615 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 SLC26A4O43511 780 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 GPIHBP1Q8IV16 184 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 YIPF2Q9BWQ6 316 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 DACT1Q9NYF0 836 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 E2F6O75461 281 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 KRT14P02533 472 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 MCM3P25205 808 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 PDCD7Q8N8D1 485 aaKnown RBP10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 NECAB1Q8N987 351 aa10.14□□□□□ -0.79
GTF2A1-203ENST00000553612 ATICP31939 592 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 KCTD16Q68DU8 428 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 TCP11L2Q8N4U5 519 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 ANKS4BQ8N8V4 417 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 IL17RAQ96F46 866 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 IWS1Q96ST2 819 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 BRD8Q9H0E9 1235 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 LZTS1Q9Y250 596 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 PDE6CP51160 858 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 DNAJC14Q6Y2X3 702 aaPredicted RBP10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 HAUS2Q9NVX0 235 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 SATB2Q9UPW6 733 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 RASSF10A6NK89 507 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 CPLX1O14810 134 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 GBP1P32455 592 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 MAP3K7CLP57077 242 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 GJC2Q5T442 439 aaPredicted RBP10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 OGFOD1Q8N543 542 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 CCDC63Q8NA47 563 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 ZKSCAN4Q969J2 545 aaPredicted RBP10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 KCNF1Q9H3M0 494 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 PLCB1Q9NQ66 1216 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 FHOD1Q9Y613 1164 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 ARID5BQ14865 1188 aa10.13□□□□□ -0.79
GTF2A1-203ENST00000553612 CC2D1AQ6P1N0 951 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 397.2 ms