RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 PRPF40BQ6NWY9 871 aaKnown RBP21.17■□□□□ 0.98
PSEN1-206ENST00000553447 ZNF589Q86UQ0 364 aaPredicted RBP21.17■□□□□ 0.98
PSEN1-206ENST00000553447 GPR101Q96P66 508 aaPredicted RBP21.17■□□□□ 0.98
PSEN1-206ENST00000553447 IPO9Q96P70 1041 aaKnown RBP21.17■□□□□ 0.98
PSEN1-206ENST00000553447 SEC62Q99442 399 aaKnown RBP21.17■□□□□ 0.98
PSEN1-206ENST00000553447 TMX4Q9H1E5 349 aaPredicted RBP21.17■□□□□ 0.98
PSEN1-206ENST00000553447 POLLQ9UGP5 575 aa21.17■□□□□ 0.98
PSEN1-206ENST00000553447 MAST2Q6P0Q8 1798 aa21.17■□□□□ 0.98
PSEN1-206ENST00000553447 CCDC88AQ3V6T2 1871 aa21.17■□□□□ 0.98
PSEN1-206ENST00000553447 MAST3O60307 1309 aa21.16■□□□□ 0.98
PSEN1-206ENST00000553447 PTH1RQ03431 593 aa21.16■□□□□ 0.98
PSEN1-206ENST00000553447 WASHC4Q2M389 1173 aa21.16■□□□□ 0.98
PSEN1-206ENST00000553447 ZNF804AQ7Z570 1209 aa21.16■□□□□ 0.98
PSEN1-206ENST00000553447 MPNDQ8N594 471 aa21.16■□□□□ 0.98
PSEN1-206ENST00000553447 APPBP2Q92624 585 aa21.16■□□□□ 0.98
PSEN1-206ENST00000553447 C6orf229H3BNL8 230 aa21.15■□□□□ 0.98
PSEN1-206ENST00000553447 HSPA4P34932 840 aa21.15■□□□□ 0.98
PSEN1-206ENST00000553447 MAP3K12Q12852 859 aa21.15■□□□□ 0.98
PSEN1-206ENST00000553447 UBE3CQ15386 1083 aa21.15■□□□□ 0.98
PSEN1-206ENST00000553447 SLC9C2Q5TAH2 1124 aa21.15■□□□□ 0.98
PSEN1-206ENST00000553447 OLFM4Q6UX06 510 aa21.15■□□□□ 0.98
PSEN1-206ENST00000553447 CCDC129Q6ZRS4 1044 aa21.15■□□□□ 0.98
PSEN1-206ENST00000553447 WWC3Q9ULE0 1092 aa21.15■□□□□ 0.98
PSEN1-206ENST00000553447 M0R2C6 588 aa21.14■□□□□ 0.97
PSEN1-206ENST00000553447 FRAT2O75474 233 aaPredicted RBP21.14■□□□□ 0.97
PSEN1-206ENST00000553447 PDE6AP16499 860 aa21.14■□□□□ 0.97
PSEN1-206ENST00000553447 DPP8Q6V1X1 898 aaPredicted RBP21.14■□□□□ 0.97
PSEN1-206ENST00000553447 TDRD7Q8NHU6 1098 aaKnown RBP21.14■□□□□ 0.97
PSEN1-206ENST00000553447 MAP4K1Q92918 833 aa21.14■□□□□ 0.97
PSEN1-206ENST00000553447 OSBP2Q969R2 916 aa21.14■□□□□ 0.97
PSEN1-206ENST00000553447 PSDA5PKW4 1024 aaPredicted RBP21.13■□□□□ 0.97
PSEN1-206ENST00000553447 ANAPC15P60006 121 aa21.13■□□□□ 0.97
PSEN1-206ENST00000553447 BRCA1P38398 1863 aaKnown RBP21.13■□□□□ 0.97
PSEN1-206ENST00000553447 ZNF532Q9HCE3 1301 aa21.12■□□□□ 0.97
PSEN1-206ENST00000553447 TCRBV5S4A2TA0A5A2 114 aa21.12■□□□□ 0.97
PSEN1-206ENST00000553447 DPEP1P16444 411 aa21.12■□□□□ 0.97
PSEN1-206ENST00000553447 C7orf43Q8WVR3 580 aa21.12■□□□□ 0.97
PSEN1-206ENST00000553447 IL17RAQ96F46 866 aa21.12■□□□□ 0.97
PSEN1-206ENST00000553447 CD209Q9NNX6 404 aa21.12■□□□□ 0.97
PSEN1-206ENST00000553447 LRP2BPQ9P2M1 347 aa21.12■□□□□ 0.97
PSEN1-206ENST00000553447 PALD1Q9ULE6 856 aa21.12■□□□□ 0.97
PSEN1-206ENST00000553447 RBM8AQ9Y5S9 174 aaKnown RBP21.12■□□□□ 0.97
PSEN1-206ENST00000553447 CHD4Q14839 1912 aa21.12■□□□□ 0.97
PSEN1-206ENST00000553447 CHAF1AQ13111 956 aaPredicted RBP21.11■□□□□ 0.97
PSEN1-206ENST00000553447 RABEP1Q15276 862 aa21.11■□□□□ 0.97
PSEN1-206ENST00000553447 MAGEB6Q8N7X4 407 aa21.11■□□□□ 0.97
PSEN1-206ENST00000553447 SGIP1Q9BQI5 828 aa21.11■□□□□ 0.97
PSEN1-206ENST00000553447 ABCF2Q9UG63 623 aa21.11■□□□□ 0.97
PSEN1-206ENST00000553447 SNED1Q8TER0 1413 aa21.11■□□□□ 0.97
PSEN1-206ENST00000553447 A0A0G2JLW4 131 aa21.1■□□□□ 0.97
PSEN1-206ENST00000553447 IL1R1P14778 569 aa21.1■□□□□ 0.97
PSEN1-206ENST00000553447 KCNA3P22001 575 aa21.1■□□□□ 0.97
PSEN1-206ENST00000553447 TGFB2P61812 414 aa21.1■□□□□ 0.97
PSEN1-206ENST00000553447 CC2D2BQ6DHV5 1058 aa21.1■□□□□ 0.97
PSEN1-206ENST00000553447 TTLL6Q8N841 843 aa21.1■□□□□ 0.97
PSEN1-206ENST00000553447 PUS7LQ9H0K6 701 aaKnown RBP21.1■□□□□ 0.97
PSEN1-206ENST00000553447 SALL1Q9NSC2 1324 aa21.09■□□□□ 0.97
PSEN1-206ENST00000553447 NECTIN1Q15223 517 aa21.09■□□□□ 0.97
PSEN1-206ENST00000553447 KCNB2Q92953 911 aa21.09■□□□□ 0.97
PSEN1-206ENST00000553447 EYA3Q99504 573 aa21.09■□□□□ 0.97
PSEN1-206ENST00000553447 DSCC1Q9BVC3 393 aa21.09■□□□□ 0.97
PSEN1-206ENST00000553447 RAI14Q9P0K7 980 aa21.09■□□□□ 0.97
PSEN1-206ENST00000553447 ZNF219Q9P2Y4 722 aaPredicted RBP21.09■□□□□ 0.97
PSEN1-206ENST00000553447 RIMBP2O15034 1052 aa21.08■□□□□ 0.97
PSEN1-206ENST00000553447 BECN1Q14457 450 aa21.08■□□□□ 0.97
PSEN1-206ENST00000553447 ERICH6Q7L0X2 663 aa21.08■□□□□ 0.97
PSEN1-206ENST00000553447 WDR66Q8TBY9 1149 aa21.08■□□□□ 0.97
PSEN1-206ENST00000553447 ZC3H12CQ9C0D7 883 aaKnown RBP21.08■□□□□ 0.97
PSEN1-206ENST00000553447 COA1Q9GZY4 146 aa21.08■□□□□ 0.97
PSEN1-206ENST00000553447 SNX14Q9Y5W7 946 aa21.08■□□□□ 0.97
PSEN1-206ENST00000553447 U3KPZ7 1027 aaPredicted RBP21.08■□□□□ 0.97
PSEN1-206ENST00000553447 GPAA1O43292 621 aa21.07■□□□□ 0.96
PSEN1-206ENST00000553447 HSPD1P10809 573 aaKnown RBP21.07■□□□□ 0.96
PSEN1-206ENST00000553447 VPS53Q5VIR6 699 aa21.07■□□□□ 0.96
PSEN1-206ENST00000553447 CREB3L3Q68CJ9 461 aa21.07■□□□□ 0.96
PSEN1-206ENST00000553447 ZGPATQ8N5A5 531 aaKnown RBP21.07■□□□□ 0.96
PSEN1-206ENST00000553447 RTFDC1Q9BY42 306 aaPredicted RBP21.07■□□□□ 0.96
PSEN1-206ENST00000553447 IGSF3O75054 1194 aa21.06■□□□□ 0.96
PSEN1-206ENST00000553447 PTGER2P43116 358 aa21.06■□□□□ 0.96
PSEN1-206ENST00000553447 GRIPAP1Q4V328 841 aa21.06■□□□□ 0.96
PSEN1-206ENST00000553447 SPTY2D1Q68D10 685 aaPredicted RBP21.06■□□□□ 0.96
PSEN1-206ENST00000553447 RASEFQ8IZ41 740 aa21.06■□□□□ 0.96
PSEN1-206ENST00000553447 SNX21Q969T3 373 aa21.06■□□□□ 0.96
PSEN1-206ENST00000553447 JAG2Q9Y219 1238 aa21.06■□□□□ 0.96
PSEN1-206ENST00000553447 SLC27A2O14975 620 aa21.05■□□□□ 0.96
PSEN1-206ENST00000553447 C21orf2O43822 256 aa21.05■□□□□ 0.96
PSEN1-206ENST00000553447 CYP7A1P22680 504 aa21.05■□□□□ 0.96
PSEN1-206ENST00000553447 RNF20Q5VTR2 975 aa21.05■□□□□ 0.96
PSEN1-206ENST00000553447 TBC1D2Q9BYX2 928 aa21.05■□□□□ 0.96
PSEN1-206ENST00000553447 LAMA4Q16363 1823 aa21.05■□□□□ 0.96
PSEN1-206ENST00000553447 CCDC93Q567U6 631 aa21.04■□□□□ 0.96
PSEN1-206ENST00000553447 NAA16Q6N069 864 aaPredicted RBP21.04■□□□□ 0.96
PSEN1-206ENST00000553447 TMED8Q6PL24 325 aaPredicted RBP21.04■□□□□ 0.96
PSEN1-206ENST00000553447 ILDR2Q71H61 639 aa21.04■□□□□ 0.96
PSEN1-206ENST00000553447 SUPT20HQ8NEM7 779 aa21.04■□□□□ 0.96
PSEN1-206ENST00000553447 AIDAQ96BJ3 306 aa21.04■□□□□ 0.96
PSEN1-206ENST00000553447 NSUN4Q96CB9 384 aaKnown RBP21.04■□□□□ 0.96
PSEN1-206ENST00000553447 PIM2Q9P1W9 311 aa21.04■□□□□ 0.96
PSEN1-206ENST00000553447 CD2APQ9Y5K6 639 aa21.04■□□□□ 0.96
PSEN1-206ENST00000553447 MYH2Q9UKX2 1941 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms