RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 TTF1Q15361 905 aaPredicted RBP18.56■□□□□ 0.56
VARS2-212ENST00000542001 CATIPQ7Z7H3 387 aa18.56■□□□□ 0.56
VARS2-212ENST00000542001 KCNG4Q8TDN1 519 aa18.56■□□□□ 0.56
VARS2-212ENST00000542001 PYCARDQ9ULZ3 195 aa18.56■□□□□ 0.56
VARS2-212ENST00000542001 POLR1AO95602 1720 aaPredicted RBP18.56■□□□□ 0.56
VARS2-212ENST00000542001 RGS12O14924 1447 aa18.56■□□□□ 0.56
VARS2-212ENST00000542001 F8W031 263 aaPredicted RBP18.56■□□□□ 0.56
VARS2-212ENST00000542001 EIF5P55010 431 aaKnown RBP18.56■□□□□ 0.56
VARS2-212ENST00000542001 WWC3Q9ULE0 1092 aa18.56■□□□□ 0.56
VARS2-212ENST00000542001 MAPK8IP1Q9UQF2 711 aa18.56■□□□□ 0.56
VARS2-212ENST00000542001 PTPRMP28827 1452 aa18.56■□□□□ 0.56
VARS2-212ENST00000542001 CCDC196A0A1B0GTZ2 297 aa18.55■□□□□ 0.56
VARS2-212ENST00000542001 SMARCE1Q969G3 411 aa18.55■□□□□ 0.56
VARS2-212ENST00000542001 EPB41L2O43491 1005 aaKnown RBP18.55■□□□□ 0.56
VARS2-212ENST00000542001 PTPN12Q05209 780 aaKnown RBP18.55■□□□□ 0.56
VARS2-212ENST00000542001 UIMC1Q96RL1 719 aa18.55■□□□□ 0.56
VARS2-212ENST00000542001 FGAP02671 866 aa18.55■□□□□ 0.56
VARS2-212ENST00000542001 KRT18P05783 430 aaKnown RBP18.55■□□□□ 0.56
VARS2-212ENST00000542001 SOGA3Q5TF21 947 aa18.55■□□□□ 0.56
VARS2-212ENST00000542001 POLA2Q14181 598 aa18.54■□□□□ 0.56
VARS2-212ENST00000542001 CCDC191Q8NCU4 936 aa18.54■□□□□ 0.56
VARS2-212ENST00000542001 ZFP91Q96JP5 570 aaPredicted RBP18.54■□□□□ 0.56
VARS2-212ENST00000542001 TM6SF1Q9BZW5 370 aa18.54■□□□□ 0.56
VARS2-212ENST00000542001 ARHGEF40Q8TER5 1519 aa18.54■□□□□ 0.56
VARS2-212ENST00000542001 MPHOSPH10O00566 681 aaKnown RBP18.54■□□□□ 0.56
VARS2-212ENST00000542001 KIF4BQ2VIQ3 1234 aa18.54■□□□□ 0.56
VARS2-212ENST00000542001 HS1BP3Q53T59 392 aa18.54■□□□□ 0.56
VARS2-212ENST00000542001 SYT10Q6XYQ8 523 aa18.54■□□□□ 0.56
VARS2-212ENST00000542001 CABP5Q9NP86 173 aa18.54■□□□□ 0.56
VARS2-212ENST00000542001 PLEKHG1Q9ULL1 1385 aa18.54■□□□□ 0.56
VARS2-212ENST00000542001 TEX13AQ9BXU3 409 aaPredicted RBP18.54■□□□□ 0.56
VARS2-212ENST00000542001 CLSTN2Q9H4D0 955 aa18.54■□□□□ 0.56
VARS2-212ENST00000542001 KARSQ15046 597 aaKnown RBP18.54■□□□□ 0.56
VARS2-212ENST00000542001 AIFM3Q96NN9 605 aa18.54■□□□□ 0.56
VARS2-212ENST00000542001 ZNF532Q9HCE3 1301 aa18.53■□□□□ 0.56
VARS2-212ENST00000542001 FAM160A1Q05DH4 1040 aa18.53■□□□□ 0.56
VARS2-212ENST00000542001 GPS2Q13227 327 aa18.53■□□□□ 0.56
VARS2-212ENST00000542001 DACH1Q9UI36 760 aa18.53■□□□□ 0.56
VARS2-212ENST00000542001 NLRP1Q9C000 1473 aa18.53■□□□□ 0.56
VARS2-212ENST00000542001 C6orf229H3BNL8 230 aa18.53■□□□□ 0.56
VARS2-212ENST00000542001 CYP27B1O15528 508 aa18.53■□□□□ 0.56
VARS2-212ENST00000542001 HSP90B2PQ58FF3 399 aa18.53■□□□□ 0.56
VARS2-212ENST00000542001 ERBB3P21860 1342 aa18.53■□□□□ 0.56
VARS2-212ENST00000542001 ARHGAP31Q2M1Z3 1444 aa18.53■□□□□ 0.56
VARS2-212ENST00000542001 EPS15P42566 896 aa18.53■□□□□ 0.56
VARS2-212ENST00000542001 APPBP2Q92624 585 aa18.53■□□□□ 0.56
VARS2-212ENST00000542001 PRIMPOLQ96LW4 560 aa18.53■□□□□ 0.56
VARS2-212ENST00000542001 HELLSQ9NRZ9 838 aa18.53■□□□□ 0.56
VARS2-212ENST00000542001 ZNF652Q9Y2D9 606 aa18.53■□□□□ 0.56
VARS2-212ENST00000542001 IDEP14735 1019 aa18.52■□□□□ 0.56
VARS2-212ENST00000542001 DDB1Q16531 1140 aa18.52■□□□□ 0.56
VARS2-212ENST00000542001 ERCC3P19447 782 aa18.52■□□□□ 0.56
VARS2-212ENST00000542001 NECTIN1Q15223 517 aa18.52■□□□□ 0.56
VARS2-212ENST00000542001 IFIT1BQ5T764 474 aaKnown RBP18.52■□□□□ 0.56
VARS2-212ENST00000542001 NBPF5PQ86XG9 351 aaPredicted RBP18.52■□□□□ 0.56
VARS2-212ENST00000542001 ZNF444Q8N0Y2 327 aaPredicted RBP18.52■□□□□ 0.56
VARS2-212ENST00000542001 DEF6Q9H4E7 631 aa18.52■□□□□ 0.56
VARS2-212ENST00000542001 GREM2Q9H772 168 aa18.52■□□□□ 0.56
VARS2-212ENST00000542001 CCDC152Q4G0S7 254 aa18.52■□□□□ 0.55
VARS2-212ENST00000542001 NAA16Q6N069 864 aaPredicted RBP18.52■□□□□ 0.55
VARS2-212ENST00000542001 TRMT44Q8IYL2 757 aaKnown RBP18.52■□□□□ 0.55
VARS2-212ENST00000542001 NUP88Q99567 741 aaPredicted RBP18.52■□□□□ 0.55
VARS2-212ENST00000542001 RNF41Q9H4P4 317 aaPredicted RBP18.52■□□□□ 0.55
VARS2-212ENST00000542001 PCDH11XQ9BZA7 1347 aa18.52■□□□□ 0.55
VARS2-212ENST00000542001 PCDH11YQ9BZA8 1340 aa18.52■□□□□ 0.55
VARS2-212ENST00000542001 IQSEC2Q5JU85 1478 aa18.52■□□□□ 0.55
VARS2-212ENST00000542001 CCDC194A0A1B0GVG4 234 aa18.51■□□□□ 0.55
VARS2-212ENST00000542001 UQCRFS1P1P0C7P4 283 aa18.51■□□□□ 0.55
VARS2-212ENST00000542001 ZNF75DP51815 510 aa18.51■□□□□ 0.55
VARS2-212ENST00000542001 ZNF827Q17R98 1081 aa18.51■□□□□ 0.55
VARS2-212ENST00000542001 UTP14AQ9BVJ6 771 aaKnown RBP18.51■□□□□ 0.55
VARS2-212ENST00000542001 TFCP2L1Q9NZI6 479 aa18.51■□□□□ 0.55
VARS2-212ENST00000542001 U2AF2P26368 475 aaKnown RBP eCLIP18.51■□□□□ 0.557e-8■□□□□ 9.4
VARS2-212ENST00000542001 CDC5LQ99459 802 aaKnown RBP18.51■□□□□ 0.55
VARS2-212ENST00000542001 INCENPQ9NQS7 918 aa18.51■□□□□ 0.55
VARS2-212ENST00000542001 ANKRD18AQ8IVF6 992 aa18.51■□□□□ 0.55
VARS2-212ENST00000542001 COPRSQ9NQ92 184 aa18.51■□□□□ 0.55
VARS2-212ENST00000542001 ZNF174Q15697 407 aa18.5■□□□□ 0.55
VARS2-212ENST00000542001 NOM1Q5C9Z4 860 aaKnown RBP18.5■□□□□ 0.55
VARS2-212ENST00000542001 ANO1Q5XXA6 986 aa18.5■□□□□ 0.55
VARS2-212ENST00000542001 CLIC6Q96NY7 704 aa18.5■□□□□ 0.55
VARS2-212ENST00000542001 ZNF202O95125 648 aa18.5■□□□□ 0.55
VARS2-212ENST00000542001 HAUS7Q99871 368 aa18.5■□□□□ 0.55
VARS2-212ENST00000542001 ANGEL1Q9UNK9 670 aaKnown RBP18.5■□□□□ 0.55
VARS2-212ENST00000542001 PHKA1P46020 1223 aa18.5■□□□□ 0.55
VARS2-212ENST00000542001 TCIRG1Q13488 830 aa18.49■□□□□ 0.55
VARS2-212ENST00000542001 KRT40Q6A162 431 aa18.49■□□□□ 0.55
VARS2-212ENST00000542001 OSBP2Q969R2 916 aa18.49■□□□□ 0.55
VARS2-212ENST00000542001 EEF2KMTQ96G04 330 aa18.49■□□□□ 0.55
VARS2-212ENST00000542001 CEP131Q9UPN4 1083 aa18.49■□□□□ 0.55
VARS2-212ENST00000542001 N4BP3O15049 544 aa18.49■□□□□ 0.55
VARS2-212ENST00000542001 SDR42E1Q8WUS8 393 aa18.49■□□□□ 0.55
VARS2-212ENST00000542001 LZTFL1Q9NQ48 299 aa18.49■□□□□ 0.55
VARS2-212ENST00000542001 CLIC4Q9Y696 253 aa18.49■□□□□ 0.55
VARS2-212ENST00000542001 COBLO75128 1261 aa18.49■□□□□ 0.55
VARS2-212ENST00000542001 TMCO3Q6UWJ1 677 aa18.49■□□□□ 0.55
VARS2-212ENST00000542001 DIS3L2Q8IYB7 885 aaKnown RBP18.49■□□□□ 0.55
VARS2-212ENST00000542001 ZNHIT6Q9NWK9 470 aaKnown RBP18.49■□□□□ 0.55
VARS2-212ENST00000542001 CPSF1Q10570 1443 aaKnown RBP18.49■□□□□ 0.55
VARS2-212ENST00000542001 POLR2DO15514 142 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms