RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 Q6ZUG5 572 aa23.91■■□□□ 1.42
OTUB1-210ENST00000541478 LRRC4BQ9NT99 713 aa23.91■■□□□ 1.42
OTUB1-210ENST00000541478 ZNF532Q9HCE3 1301 aa23.91■■□□□ 1.42
OTUB1-210ENST00000541478 BCAMP50895 628 aa23.91■■□□□ 1.42
OTUB1-210ENST00000541478 COL9A3Q14050 684 aaPredicted RBP23.91■■□□□ 1.42
OTUB1-210ENST00000541478 KLHL40Q2TBA0 621 aa23.91■■□□□ 1.42
OTUB1-210ENST00000541478 FOXD4L5Q5VV16 416 aaPredicted RBP23.91■■□□□ 1.42
OTUB1-210ENST00000541478 FOXD4L4Q8WXT5 416 aaPredicted RBP23.91■■□□□ 1.42
OTUB1-210ENST00000541478 MINPP1Q9UNW1 487 aa23.91■■□□□ 1.42
OTUB1-210ENST00000541478 A0A1B0GUL6 1792 aa23.9■■□□□ 1.42
OTUB1-210ENST00000541478 DOCK2Q92608 1830 aa23.9■■□□□ 1.42
OTUB1-210ENST00000541478 SYT1P21579 422 aa23.9■■□□□ 1.42
OTUB1-210ENST00000541478 RPS8P62241 208 aaKnown RBP23.9■■□□□ 1.42
OTUB1-210ENST00000541478 NECAB1Q8N987 351 aa23.9■■□□□ 1.42
OTUB1-210ENST00000541478 CELF1Q92879 486 aaKnown RBP23.9■■□□□ 1.42
OTUB1-210ENST00000541478 GZF1Q9H116 711 aaPredicted RBP23.9■■□□□ 1.42
OTUB1-210ENST00000541478 DDX49Q9Y6V7 483 aaKnown RBP23.9■■□□□ 1.42
OTUB1-210ENST00000541478 BRWD3Q6RI45 1802 aa23.9■■□□□ 1.42
OTUB1-210ENST00000541478 COL4A1P02462 1669 aa23.89■■□□□ 1.42
OTUB1-210ENST00000541478 FGAP02671 866 aa23.89■■□□□ 1.42
OTUB1-210ENST00000541478 ST3GAL1Q11201 340 aa23.89■■□□□ 1.42
OTUB1-210ENST00000541478 CAVIN4Q5BKX8 364 aa23.89■■□□□ 1.42
OTUB1-210ENST00000541478 ATP6V1DQ9Y5K8 247 aa23.89■■□□□ 1.42
OTUB1-210ENST00000541478 ZNF804BA4D1E1 1349 aa23.89■■□□□ 1.42
OTUB1-210ENST00000541478 TCRBV5S4A2TA0A5A2 114 aa23.89■■□□□ 1.41
OTUB1-210ENST00000541478 FOXP2O15409 715 aa23.89■■□□□ 1.41
OTUB1-210ENST00000541478 ZSCAN22P10073 491 aaPredicted RBP23.89■■□□□ 1.41
OTUB1-210ENST00000541478 AIDAQ96BJ3 306 aa23.89■■□□□ 1.41
OTUB1-210ENST00000541478 LMBRD1Q9NUN5 540 aa23.89■■□□□ 1.41
OTUB1-210ENST00000541478 WWC3Q9ULE0 1092 aa23.89■■□□□ 1.41
OTUB1-210ENST00000541478 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.88■■□□□ 1.41
OTUB1-210ENST00000541478 PDCP20941 246 aa23.88■■□□□ 1.41
OTUB1-210ENST00000541478 ANKRD2Q9GZV1 360 aa23.88■■□□□ 1.41
OTUB1-210ENST00000541478 LAMA4Q16363 1823 aa23.88■■□□□ 1.41
OTUB1-210ENST00000541478 ZNF213O14771 459 aa23.87■■□□□ 1.41
OTUB1-210ENST00000541478 TTLL5Q6EMB2 1281 aa23.87■■□□□ 1.41
OTUB1-210ENST00000541478 AGXT2Q9BYV1 514 aa23.87■■□□□ 1.41
OTUB1-210ENST00000541478 EXOSC10Q01780 885 aaKnown RBP23.87■■□□□ 1.41
OTUB1-210ENST00000541478 VPS37DQ86XT2 251 aa23.87■■□□□ 1.41
OTUB1-210ENST00000541478 MAGEB6Q8N7X4 407 aa23.87■■□□□ 1.41
OTUB1-210ENST00000541478 CNBD1Q8NA66 436 aa23.87■■□□□ 1.41
OTUB1-210ENST00000541478 BRF1Q92994 677 aa23.87■■□□□ 1.41
OTUB1-210ENST00000541478 GTF3C6Q969F1 213 aa23.87■■□□□ 1.41
OTUB1-210ENST00000541478 UBR3Q6ZT12 1888 aa23.86■■□□□ 1.41
OTUB1-210ENST00000541478 TRIM37O94972 964 aa23.86■■□□□ 1.41
OTUB1-210ENST00000541478 NFIXQ14938 502 aa23.86■■□□□ 1.41
OTUB1-210ENST00000541478 CHMP4CQ96CF2 233 aa23.86■■□□□ 1.41
OTUB1-210ENST00000541478 MYO5AQ9Y4I1 1855 aaKnown RBP23.86■■□□□ 1.41
OTUB1-210ENST00000541478 PRPF40AO75400 957 aaKnown RBP23.85■■□□□ 1.41
OTUB1-210ENST00000541478 L1TD1Q5T7N2 865 aaKnown RBP23.85■■□□□ 1.41
OTUB1-210ENST00000541478 FBXL16Q8N461 479 aa23.85■■□□□ 1.41
OTUB1-210ENST00000541478 ISY1Q9ULR0 285 aaKnown RBP23.85■■□□□ 1.41
OTUB1-210ENST00000541478 ZMYM6O95789 1325 aa23.85■■□□□ 1.41
OTUB1-210ENST00000541478 LRP2BPQ9P2M1 347 aa23.84■■□□□ 1.41
OTUB1-210ENST00000541478 TAF1P21675 1872 aa23.84■■□□□ 1.41
OTUB1-210ENST00000541478 F13A1P00488 732 aa23.84■■□□□ 1.41
OTUB1-210ENST00000541478 STK3Q13188 491 aa23.84■■□□□ 1.41
OTUB1-210ENST00000541478 RALYLQ86SE5 291 aaKnown RBP23.84■■□□□ 1.41
OTUB1-210ENST00000541478 NCOA7Q8NI08 942 aa23.84■■□□□ 1.41
OTUB1-210ENST00000541478 DENND2AQ9ULE3 1009 aa23.84■■□□□ 1.41
OTUB1-210ENST00000541478 A0A0G2JLW4 131 aa23.83■■□□□ 1.41
OTUB1-210ENST00000541478 SEMA3EO15041 775 aa23.83■■□□□ 1.41
OTUB1-210ENST00000541478 APPP05067 770 aa23.83■■□□□ 1.41
OTUB1-210ENST00000541478 GNAT2P19087 354 aa23.83■■□□□ 1.41
OTUB1-210ENST00000541478 HAND2P61296 217 aa23.83■■□□□ 1.41
OTUB1-210ENST00000541478 STRBPQ96SI9 672 aaKnown RBP23.83■■□□□ 1.41
OTUB1-210ENST00000541478 LRRC2Q9BYS8 371 aa23.83■■□□□ 1.41
OTUB1-210ENST00000541478 EP400Q96L91 3159 aa23.82■■□□□ 1.4
OTUB1-210ENST00000541478 GOLGA6L3A6NEY3 463 aa23.82■■□□□ 1.4
OTUB1-210ENST00000541478 GYG1P46976 350 aa23.82■■□□□ 1.4
OTUB1-210ENST00000541478 TRDNQ13061 729 aa23.82■■□□□ 1.4
OTUB1-210ENST00000541478 LARP1BQ659C4 914 aaKnown RBP23.82■■□□□ 1.4
OTUB1-210ENST00000541478 WDR19Q8NEZ3 1342 aa23.82■■□□□ 1.4
OTUB1-210ENST00000541478 PFKFB2O60825 505 aa23.82■■□□□ 1.4
OTUB1-210ENST00000541478 MBD3O95983 291 aa23.82■■□□□ 1.4
OTUB1-210ENST00000541478 MCM5P33992 734 aa23.82■■□□□ 1.4
OTUB1-210ENST00000541478 ALX1Q15699 326 aa23.82■■□□□ 1.4
OTUB1-210ENST00000541478 LLPHQ9BRT6 129 aaKnown RBP23.82■■□□□ 1.4
OTUB1-210ENST00000541478 MTMR6Q9Y217 621 aa23.82■■□□□ 1.4
OTUB1-210ENST00000541478 TM4SF1P30408 202 aa23.81■■□□□ 1.4
OTUB1-210ENST00000541478 CCDC24Q8N4L8 307 aa23.81■■□□□ 1.4
OTUB1-210ENST00000541478 TNRC6CQ9HCJ0 1690 aaKnown RBP23.81■■□□□ 1.4
OTUB1-210ENST00000541478 PNPLA7Q6ZV29 1317 aa23.81■■□□□ 1.4
OTUB1-210ENST00000541478 PATL2C9JE40 543 aaKnown RBP23.8■■□□□ 1.4
OTUB1-210ENST00000541478 MBD4O95243 580 aa23.8■■□□□ 1.4
OTUB1-210ENST00000541478 GYS1P13807 737 aa23.8■■□□□ 1.4
OTUB1-210ENST00000541478 ZNF274Q96GC6 653 aaPredicted RBP23.8■■□□□ 1.4
OTUB1-210ENST00000541478 PDS5AQ29RF7 1337 aaKnown RBP23.8■■□□□ 1.4
OTUB1-210ENST00000541478 VPS37CA5D8V6 355 aaPredicted RBP23.8■■□□□ 1.4
OTUB1-210ENST00000541478 ST5P78524 1137 aa23.8■■□□□ 1.4
OTUB1-210ENST00000541478 GRAPQ13588 217 aa23.8■■□□□ 1.4
OTUB1-210ENST00000541478 MB21D2Q8IYB1 491 aaPredicted RBP23.8■■□□□ 1.4
OTUB1-210ENST00000541478 GRAPLQ8TC17 118 aaPredicted RBP23.8■■□□□ 1.4
OTUB1-210ENST00000541478 FAM84BQ96KN1 310 aaPredicted RBP23.8■■□□□ 1.4
OTUB1-210ENST00000541478 FBXO33Q7Z6M2 555 aa23.79■■□□□ 1.4
OTUB1-210ENST00000541478 NACAP1Q9BZK3 213 aa23.79■■□□□ 1.4
OTUB1-210ENST00000541478 KIF3AQ9Y496 699 aa23.79■■□□□ 1.4
OTUB1-210ENST00000541478 NCLP19338 710 aaKnown RBP23.78■■□□□ 1.4
OTUB1-210ENST00000541478 APOBRQ0VD83 1088 aa23.78■■□□□ 1.4
OTUB1-210ENST00000541478 SCRN1Q12765 414 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms