RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 IRS4O14654 1257 aaPredicted RBP13.55□□□□□ -0.24
C11orf54-214ENST00000540113 MCM5P33992 734 aa13.55□□□□□ -0.24
C11orf54-214ENST00000540113 KIAA2012Q0VF49 1180 aa13.55□□□□□ -0.24
C11orf54-214ENST00000540113 DZIP3Q86Y13 1208 aaKnown RBP13.55□□□□□ -0.24
C11orf54-214ENST00000540113 VGLL2Q8N8G2 317 aa13.55□□□□□ -0.24
C11orf54-214ENST00000540113 SPATA31A1Q5TZJ5 1347 aa13.55□□□□□ -0.24
C11orf54-214ENST00000540113 MYO5AQ9Y4I1 1855 aaKnown RBP13.55□□□□□ -0.24
C11orf54-214ENST00000540113 HMGB1P09429 215 aaKnown RBP13.55□□□□□ -0.24
C11orf54-214ENST00000540113 ADD1P35611 737 aaKnown RBP13.55□□□□□ -0.24
C11orf54-214ENST00000540113 IL6STP40189 918 aaPredicted RBP13.55□□□□□ -0.24
C11orf54-214ENST00000540113 ATP2B3Q16720 1220 aa13.55□□□□□ -0.24
C11orf54-214ENST00000540113 METTL24Q5JXM2 366 aa13.55□□□□□ -0.24
C11orf54-214ENST00000540113 NKX2-3Q8TAU0 364 aa13.55□□□□□ -0.24
C11orf54-214ENST00000540113 GJB4Q9NTQ9 266 aa13.55□□□□□ -0.24
C11orf54-214ENST00000540113 TRMT112Q9UI30 125 aaKnown RBP13.55□□□□□ -0.24
C11orf54-214ENST00000540113 THRAP3Q9Y2W1 955 aaKnown RBP13.55□□□□□ -0.24
C11orf54-214ENST00000540113 NUTM2BA6NNL0 878 aaPredicted RBP13.54□□□□□ -0.24
C11orf54-214ENST00000540113 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
C11orf54-214ENST00000540113 NUTM2EB1AL46 878 aaPredicted RBP13.54□□□□□ -0.24
C11orf54-214ENST00000540113 ERVV-1B6SEH8 477 aa13.54□□□□□ -0.24
C11orf54-214ENST00000540113 FGAP02671 866 aa13.54□□□□□ -0.24
C11orf54-214ENST00000540113 LDHAL6AQ6ZMR3 332 aa13.54□□□□□ -0.24
C11orf54-214ENST00000540113 NUTM2AQ8IVF1 878 aaPredicted RBP13.54□□□□□ -0.24
C11orf54-214ENST00000540113 ZNF34Q8IZ26 560 aa13.54□□□□□ -0.24
C11orf54-214ENST00000540113 HELBQ8NG08 1087 aaPredicted RBP13.54□□□□□ -0.24
C11orf54-214ENST00000540113 CDCA7Q9BWT1 371 aaPredicted RBP13.54□□□□□ -0.24
C11orf54-214ENST00000540113 TPM2P07951 284 aa13.54□□□□□ -0.24
C11orf54-214ENST00000540113 MCAMP43121 646 aa13.54□□□□□ -0.24
C11orf54-214ENST00000540113 DNTTIP2Q5QJE6 756 aaKnown RBP13.54□□□□□ -0.24
C11orf54-214ENST00000540113 CERKQ8TCT0 537 aa13.54□□□□□ -0.24
C11orf54-214ENST00000540113 ERCC4Q92889 916 aaPredicted RBP13.54□□□□□ -0.24
C11orf54-214ENST00000540113 USP28Q96RU2 1077 aa13.54□□□□□ -0.24
C11orf54-214ENST00000540113 CLSTN2Q9H4D0 955 aa13.54□□□□□ -0.24
C11orf54-214ENST00000540113 CBX8Q9HC52 389 aa13.54□□□□□ -0.24
C11orf54-214ENST00000540113 ANKRD18BA2A2Z9 1011 aa13.53□□□□□ -0.24
C11orf54-214ENST00000540113 SNAP23O00161 211 aa13.53□□□□□ -0.24
C11orf54-214ENST00000540113 FDPSP14324 419 aaKnown RBP13.53□□□□□ -0.24
C11orf54-214ENST00000540113 INTS5Q6P9B9 1019 aaKnown RBP13.53□□□□□ -0.24
C11orf54-214ENST00000540113 MARCH10Q8NA82 808 aaPredicted RBP13.53□□□□□ -0.24
C11orf54-214ENST00000540113 DNAJC25Q9H1X3 360 aa13.53□□□□□ -0.24
C11orf54-214ENST00000540113 GOLPH3LQ9H4A5 285 aa13.53□□□□□ -0.24
C11orf54-214ENST00000540113 CNNM1Q9NRU3 951 aa13.53□□□□□ -0.24
C11orf54-214ENST00000540113 MYH14Q7Z406 1995 aaKnown RBP13.53□□□□□ -0.24
C11orf54-214ENST00000540113 ARAP2Q8WZ64 1704 aa13.53□□□□□ -0.24
C11orf54-214ENST00000540113 ABCC12Q96J65 1359 aa13.53□□□□□ -0.24
C11orf54-214ENST00000540113 UQCRHLA0A096LP55 91 aa13.53□□□□□ -0.24
C11orf54-214ENST00000540113 UQCRHP07919 91 aa13.53□□□□□ -0.24
C11orf54-214ENST00000540113 PDIA4P13667 645 aaKnown RBP13.53□□□□□ -0.24
C11orf54-214ENST00000540113 EIF5P55010 431 aaKnown RBP13.53□□□□□ -0.24
C11orf54-214ENST00000540113 ILDR1Q86SU0 546 aaPredicted RBP13.53□□□□□ -0.24
C11orf54-214ENST00000540113 FAM200AQ8TCP9 573 aa13.53□□□□□ -0.24
C11orf54-214ENST00000540113 ACSBG1Q96GR2 724 aa13.53□□□□□ -0.24
C11orf54-214ENST00000540113 AGXT2Q9BYV1 514 aa13.53□□□□□ -0.24
C11orf54-214ENST00000540113 KCNF1Q9H3M0 494 aa13.53□□□□□ -0.24
C11orf54-214ENST00000540113 CICQ96RK0 1608 aaPredicted RBP13.53□□□□□ -0.24
C11orf54-214ENST00000540113 DDX60Q8IY21 1712 aaKnown RBP13.52□□□□□ -0.24
C11orf54-214ENST00000540113 PDE8AO60658 829 aa13.52□□□□□ -0.24
C11orf54-214ENST00000540113 FBXW7Q969H0 707 aa13.52□□□□□ -0.24
C11orf54-214ENST00000540113 LLPHQ9BRT6 129 aaKnown RBP13.52□□□□□ -0.24
C11orf54-214ENST00000540113 ZSCAN16Q9H4T2 348 aaPredicted RBP13.52□□□□□ -0.24
C11orf54-214ENST00000540113 GPAA1O43292 621 aa13.52□□□□□ -0.25
C11orf54-214ENST00000540113 PRC1O43663 620 aa13.52□□□□□ -0.25
C11orf54-214ENST00000540113 HSP90AA2PQ14568 343 aaPredicted RBP13.52□□□□□ -0.25
C11orf54-214ENST00000540113 DDB1Q16531 1140 aa13.52□□□□□ -0.25
C11orf54-214ENST00000540113 CCAR1Q8IX12 1150 aaKnown RBP13.52□□□□□ -0.25
C11orf54-214ENST00000540113 DDX19AQ9NUU7 478 aaKnown RBP13.52□□□□□ -0.25
C11orf54-214ENST00000540113 PYCARDQ9ULZ3 195 aa13.52□□□□□ -0.25
C11orf54-214ENST00000540113 KLF18A0A0U1RQI7 1052 aa13.51□□□□□ -0.25
C11orf54-214ENST00000540113 ZFYP08048 801 aaPredicted RBP13.51□□□□□ -0.25
C11orf54-214ENST00000540113 ANTXR2P58335 489 aa13.51□□□□□ -0.25
C11orf54-214ENST00000540113 ITPK1Q13572 414 aa13.51□□□□□ -0.25
C11orf54-214ENST00000540113 NOLC1Q14978 699 aaKnown RBP eCLIP13.51□□□□□ -0.25
C11orf54-214ENST00000540113 IMMTQ16891 758 aaKnown RBP13.51□□□□□ -0.25
C11orf54-214ENST00000540113 PIH1D3Q9NQM4 214 aaKnown RBP13.51□□□□□ -0.25
C11orf54-214ENST00000540113 CCDC87Q9NVE4 849 aa13.51□□□□□ -0.25
C11orf54-214ENST00000540113 CFAP45Q9UL16 551 aa13.51□□□□□ -0.25
C11orf54-214ENST00000540113 CARMIL3Q8ND23 1372 aa13.51□□□□□ -0.25
C11orf54-214ENST00000540113 SALL1Q9NSC2 1324 aa13.51□□□□□ -0.25
C11orf54-214ENST00000540113 IDH1O75874 414 aaKnown RBP13.51□□□□□ -0.25
C11orf54-214ENST00000540113 CRKLP46109 303 aaKnown RBP13.51□□□□□ -0.25
C11orf54-214ENST00000540113 SUSD4Q5VX71 490 aa13.51□□□□□ -0.25
C11orf54-214ENST00000540113 SASS6Q6UVJ0 657 aa13.51□□□□□ -0.25
C11orf54-214ENST00000540113 APPBP2Q92624 585 aa13.51□□□□□ -0.25
C11orf54-214ENST00000540113 INCENPQ9NQS7 918 aa13.51□□□□□ -0.25
C11orf54-214ENST00000540113 NRBP1Q9UHY1 535 aa13.51□□□□□ -0.25
C11orf54-214ENST00000540113 MYH15Q9Y2K3 1946 aa13.5□□□□□ -0.25
C11orf54-214ENST00000540113 SPATA31A5Q5VU36 1347 aa13.5□□□□□ -0.25
C11orf54-214ENST00000540113 SPATA31A7Q8IWB4 1347 aa13.5□□□□□ -0.25
C11orf54-214ENST00000540113 POLR3DP05423 398 aaPredicted RBP13.5□□□□□ -0.25
C11orf54-214ENST00000540113 RXRAP19793 462 aa13.5□□□□□ -0.25
C11orf54-214ENST00000540113 PHKA1P46020 1223 aa13.5□□□□□ -0.25
C11orf54-214ENST00000540113 HMGN5P82970 282 aaKnown RBP13.5□□□□□ -0.25
C11orf54-214ENST00000540113 SLC9C2Q5TAH2 1124 aa13.5□□□□□ -0.25
C11orf54-214ENST00000540113 NAA16Q6N069 864 aaPredicted RBP13.5□□□□□ -0.25
C11orf54-214ENST00000540113 PIBF1Q8WXW3 757 aa13.5□□□□□ -0.25
C11orf54-214ENST00000540113 ZNF274Q96GC6 653 aaPredicted RBP13.5□□□□□ -0.25
C11orf54-214ENST00000540113 GOLGA8BA8MQT2 603 aa13.5□□□□□ -0.25
C11orf54-214ENST00000540113 PDE8BO95263 885 aa13.5□□□□□ -0.25
C11orf54-214ENST00000540113 APPP05067 770 aa13.5□□□□□ -0.25
C11orf54-214ENST00000540113 PTGS1P23219 599 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms