RNA–Protein interactions for RNA: ENST00000540079.6

KIFC3-205, Transcript of kinesin family member C3, humanhuman

TSL 2 BASIC

Gene KIFC3, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-205ENST00000540079 SMARCE1Q969G3 411 aa18.22■□□□□ 0.51
KIFC3-205ENST00000540079 CCDC85AQ96PX6 553 aaPredicted RBP18.22■□□□□ 0.51
KIFC3-205ENST00000540079 MED23Q9ULK4 1368 aa18.22■□□□□ 0.51
KIFC3-205ENST00000540079 SLC27A2O14975 620 aa18.22■□□□□ 0.51
KIFC3-205ENST00000540079 ISM2Q6H9L7 571 aa18.22■□□□□ 0.51
KIFC3-205ENST00000540079 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.22■□□□□ 0.51
KIFC3-205ENST00000540079 FSD1Q9BTV5 496 aa18.21■□□□□ 0.51
KIFC3-205ENST00000540079 CHGBP05060 677 aa18.21■□□□□ 0.51
KIFC3-205ENST00000540079 GUCY1B3Q02153 619 aa18.21■□□□□ 0.51
KIFC3-205ENST00000540079 GOLPH3LQ9H4A5 285 aa18.21■□□□□ 0.51
KIFC3-205ENST00000540079 HMG20BQ9P0W2 317 aa18.21■□□□□ 0.51
KIFC3-205ENST00000540079 MYH15Q9Y2K3 1946 aa18.21■□□□□ 0.51
KIFC3-205ENST00000540079 BIN1O00499 593 aa18.2■□□□□ 0.5
KIFC3-205ENST00000540079 NEMFO60524 1076 aa18.2■□□□□ 0.5
KIFC3-205ENST00000540079 SMC2O95347 1197 aa18.2■□□□□ 0.5
KIFC3-205ENST00000540079 RPS6KB1P23443 525 aa18.2■□□□□ 0.5
KIFC3-205ENST00000540079 PIGBQ92521 554 aa18.2■□□□□ 0.5
KIFC3-205ENST00000540079 RSPH14Q9UHP6 348 aa18.2■□□□□ 0.5
KIFC3-205ENST00000540079 DNAI1Q9UI46 699 aa18.2■□□□□ 0.5
KIFC3-205ENST00000540079 ADAMTS2O95450 1211 aa18.2■□□□□ 0.5
KIFC3-205ENST00000540079 H2AFXP16104 143 aaPredicted RBP18.2■□□□□ 0.5
KIFC3-205ENST00000540079 RNF20Q5VTR2 975 aa18.2■□□□□ 0.5
KIFC3-205ENST00000540079 PPP1R13BQ96KQ4 1090 aa18.2■□□□□ 0.5
KIFC3-205ENST00000540079 KCND1Q9NSA2 647 aa18.2■□□□□ 0.5
KIFC3-205ENST00000540079 CWC25Q9NXE8 425 aaPredicted RBP18.2■□□□□ 0.5
KIFC3-205ENST00000540079 NKX1-1Q15270 411 aaPredicted RBP18.19■□□□□ 0.5
KIFC3-205ENST00000540079 DHX40Q8IX18 779 aaKnown RBP18.19■□□□□ 0.5
KIFC3-205ENST00000540079 DNAJC10Q8IXB1 793 aa18.19■□□□□ 0.5
KIFC3-205ENST00000540079 BRF1Q92994 677 aa18.19■□□□□ 0.5
KIFC3-205ENST00000540079 NEUROD6Q96NK8 337 aa18.19■□□□□ 0.5
KIFC3-205ENST00000540079 TMC6Q7Z403 805 aa18.19■□□□□ 0.5
KIFC3-205ENST00000540079 ZNF594Q96JF6 807 aaPredicted RBP18.19■□□□□ 0.5
KIFC3-205ENST00000540079 DBNLQ9UJU6 430 aaKnown RBP18.19■□□□□ 0.5
KIFC3-205ENST00000540079 PKD1L3Q7Z443 1732 aa18.19■□□□□ 0.5
KIFC3-205ENST00000540079 H3BQV1 296 aa18.19■□□□□ 0.5
KIFC3-205ENST00000540079 TOB2Q14106 344 aaPredicted RBP18.19■□□□□ 0.5
KIFC3-205ENST00000540079 IFFO2Q5TF58 517 aa18.19■□□□□ 0.5
KIFC3-205ENST00000540079 BLOC1S2Q6QNY1 142 aa18.19■□□□□ 0.5
KIFC3-205ENST00000540079 CCAR1Q8IX12 1150 aaKnown RBP18.19■□□□□ 0.5
KIFC3-205ENST00000540079 COPRSQ9NQ92 184 aa18.19■□□□□ 0.5
KIFC3-205ENST00000540079 RFX5P48382 616 aaPredicted RBP18.18■□□□□ 0.5
KIFC3-205ENST00000540079 NMIQ13287 307 aaPredicted RBP18.18■□□□□ 0.5
KIFC3-205ENST00000540079 NBPF11Q86T75 865 aa18.18■□□□□ 0.5
KIFC3-205ENST00000540079 MRFAP1L1Q96HT8 127 aa18.18■□□□□ 0.5
KIFC3-205ENST00000540079 DBNDD2Q9BQY9 259 aa18.18■□□□□ 0.5
KIFC3-205ENST00000540079 SASH3O75995 380 aa18.17■□□□□ 0.5
KIFC3-205ENST00000540079 TNNI3KQ59H18 835 aa18.17■□□□□ 0.5
KIFC3-205ENST00000540079 USPL1Q5W0Q7 1092 aa18.17■□□□□ 0.5
KIFC3-205ENST00000540079 FPGT-TNNI3KV9GXZ4 949 aa18.17■□□□□ 0.5
KIFC3-205ENST00000540079 FANCGO15287 622 aa18.17■□□□□ 0.5
KIFC3-205ENST00000540079 URI1O94763 535 aaPredicted RBP18.17■□□□□ 0.5
KIFC3-205ENST00000540079 ARMCX5Q6P1M9 558 aa18.17■□□□□ 0.5
KIFC3-205ENST00000540079 ABCC6O95255 1503 aa18.17■□□□□ 0.5
KIFC3-205ENST00000540079 ANKRD65E5RJM6 399 aa18.16■□□□□ 0.5
KIFC3-205ENST00000540079 HSP90B1P14625 803 aaKnown RBP18.16■□□□□ 0.5
KIFC3-205ENST00000540079 CASP7P55210 303 aa18.16■□□□□ 0.5
KIFC3-205ENST00000540079 RESTQ13127 1097 aa18.16■□□□□ 0.5
KIFC3-205ENST00000540079 UBXN4Q92575 508 aa18.16■□□□□ 0.5
KIFC3-205ENST00000540079 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.16■□□□□ 0.54e-6■■■□□ 14.6
KIFC3-205ENST00000540079 RFX7Q2KHR2 1363 aa18.16■□□□□ 0.5
KIFC3-205ENST00000540079 A0A0D9SFI3 127 aa18.16■□□□□ 0.5
KIFC3-205ENST00000540079 TIMM10P62072 90 aa18.16■□□□□ 0.5
KIFC3-205ENST00000540079 GNL2Q13823 731 aaKnown RBP18.16■□□□□ 0.5
KIFC3-205ENST00000540079 RABL6Q3YEC7 729 aaPredicted RBP18.16■□□□□ 0.5
KIFC3-205ENST00000540079 TMCO3Q6UWJ1 677 aa18.16■□□□□ 0.5
KIFC3-205ENST00000540079 SEC62Q99442 399 aaKnown RBP18.16■□□□□ 0.5
KIFC3-205ENST00000540079 CARD6Q9BX69 1037 aa18.16■□□□□ 0.5
KIFC3-205ENST00000540079 XPO4Q9C0E2 1151 aaKnown RBP18.16■□□□□ 0.5
KIFC3-205ENST00000540079 IFNKQ9P0W0 207 aa18.16■□□□□ 0.5
KIFC3-205ENST00000540079 FOXO4P98177 505 aa18.15■□□□□ 0.5
KIFC3-205ENST00000540079 ZSCAN16Q9H4T2 348 aaPredicted RBP18.15■□□□□ 0.5
KIFC3-205ENST00000540079 H7C1W4 665 aa18.15■□□□□ 0.5
KIFC3-205ENST00000540079 CTAGE5O15320 804 aa18.15■□□□□ 0.5
KIFC3-205ENST00000540079 GPTP24298 496 aa18.15■□□□□ 0.5
KIFC3-205ENST00000540079 CCDC191Q8NCU4 936 aa18.15■□□□□ 0.5
KIFC3-205ENST00000540079 FAM89AQ96GI7 184 aa18.15■□□□□ 0.5
KIFC3-205ENST00000540079 ZSWIM4Q9H7M6 989 aa18.15■□□□□ 0.5
KIFC3-205ENST00000540079 OAS2P29728 719 aaKnown RBP18.14■□□□□ 0.5
KIFC3-205ENST00000540079 KRT32Q14532 448 aa18.14■□□□□ 0.5
KIFC3-205ENST00000540079 STX1AQ16623 288 aa18.14■□□□□ 0.5
KIFC3-205ENST00000540079 HSP90AA4PQ58FG1 418 aa18.14■□□□□ 0.5
KIFC3-205ENST00000540079 ATG3Q9NT62 314 aa18.14■□□□□ 0.5
KIFC3-205ENST00000540079 DDX46Q7L014 1031 aaKnown RBP18.14■□□□□ 0.49
KIFC3-205ENST00000540079 ZNF589Q86UQ0 364 aaPredicted RBP18.14■□□□□ 0.49
KIFC3-205ENST00000540079 LRRC24Q50LG9 513 aa18.13■□□□□ 0.49
KIFC3-205ENST00000540079 SYNE4Q8N205 404 aa18.13■□□□□ 0.49
KIFC3-205ENST00000540079 NUTM2BA6NNL0 878 aaPredicted RBP18.13■□□□□ 0.49
KIFC3-205ENST00000540079 NUTM2EB1AL46 878 aaPredicted RBP18.13■□□□□ 0.49
KIFC3-205ENST00000540079 SKIDA1Q1XH10 827 aa18.13■□□□□ 0.49
KIFC3-205ENST00000540079 DPCR1Q3MIW9 517 aa18.13■□□□□ 0.49
KIFC3-205ENST00000540079 SLFNL1Q499Z3 407 aa18.13■□□□□ 0.49
KIFC3-205ENST00000540079 NUTM2AQ8IVF1 878 aaPredicted RBP18.13■□□□□ 0.49
KIFC3-205ENST00000540079 MNS1Q8NEH6 495 aa18.13■□□□□ 0.49
KIFC3-205ENST00000540079 PARP4Q9UKK3 1724 aaKnown RBP18.13■□□□□ 0.49
KIFC3-205ENST00000540079 A0A1B0GVL5 298 aa18.13■□□□□ 0.49
KIFC3-205ENST00000540079 EXOC5O00471 708 aa18.13■□□□□ 0.49
KIFC3-205ENST00000540079 ME1P48163 572 aa18.13■□□□□ 0.49
KIFC3-205ENST00000540079 CFAP45Q9UL16 551 aa18.13■□□□□ 0.49
KIFC3-205ENST00000540079 AFDNP55196 1824 aaKnown RBP18.12■□□□□ 0.49
KIFC3-205ENST00000540079 STARD3NLO95772 234 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms