RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 TRMT44Q8IYL2 757 aaKnown RBP14.92□□□□□ -0.02
MSH6-210ENST00000540021 MYL10Q9BUA6 226 aa14.92□□□□□ -0.02
MSH6-210ENST00000540021 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.92□□□□□ -0.022e-8■□□□□ 9.7
MSH6-210ENST00000540021 BABAM1Q9NWV8 329 aa14.92□□□□□ -0.02
MSH6-210ENST00000540021 NEURL1BA8MQ27 555 aa14.92□□□□□ -0.02
MSH6-210ENST00000540021 KIF5CO60282 957 aa14.92□□□□□ -0.02
MSH6-210ENST00000540021 IPO7O95373 1038 aaKnown RBP14.92□□□□□ -0.02
MSH6-210ENST00000540021 ATP5JP18859 108 aa14.92□□□□□ -0.02
MSH6-210ENST00000540021 ADKP55263 362 aaKnown RBP14.92□□□□□ -0.02
MSH6-210ENST00000540021 ANO1Q5XXA6 986 aa14.92□□□□□ -0.02
MSH6-210ENST00000540021 LLPHQ9BRT6 129 aaKnown RBP14.92□□□□□ -0.02
MSH6-210ENST00000540021 PFKFB2O60825 505 aa14.91□□□□□ -0.02
MSH6-210ENST00000540021 HOXB7P09629 217 aa14.91□□□□□ -0.02
MSH6-210ENST00000540021 MTX1Q13505 466 aa14.91□□□□□ -0.02
MSH6-210ENST00000540021 AXDND1Q5T1B0 1012 aaPredicted RBP14.91□□□□□ -0.02
MSH6-210ENST00000540021 RHOXF2BP0C7M4 288 aa14.91□□□□□ -0.02
MSH6-210ENST00000540021 PFKFB1P16118 471 aa14.91□□□□□ -0.02
MSH6-210ENST00000540021 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
MSH6-210ENST00000540021 CLCN6P51797 869 aa14.91□□□□□ -0.02
MSH6-210ENST00000540021 CHRNA2Q15822 529 aa14.91□□□□□ -0.02
MSH6-210ENST00000540021 CCDC191Q8NCU4 936 aa14.91□□□□□ -0.02
MSH6-210ENST00000540021 RHOXF2Q9BQY4 288 aa14.91□□□□□ -0.02
MSH6-210ENST00000540021 RCOR1Q9UKL0 485 aa14.91□□□□□ -0.02
MSH6-210ENST00000540021 ADCY9O60503 1353 aa14.91□□□□□ -0.02
MSH6-210ENST00000540021 IFIT3O14879 490 aaKnown RBP14.91□□□□□ -0.02
MSH6-210ENST00000540021 RNF113AO15541 343 aaKnown RBP14.91□□□□□ -0.02
MSH6-210ENST00000540021 ERLIN1O75477 346 aa14.91□□□□□ -0.02
MSH6-210ENST00000540021 ETF1P62495 437 aaKnown RBP14.91□□□□□ -0.02
MSH6-210ENST00000540021 ADALQ6DHV7 355 aa14.91□□□□□ -0.02
MSH6-210ENST00000540021 ZNF790Q6PG37 636 aa14.9□□□□□ -0.02
MSH6-210ENST00000540021 AIDAQ96BJ3 306 aa14.9□□□□□ -0.02
MSH6-210ENST00000540021 BAG1Q99933 345 aaPredicted RBP14.9□□□□□ -0.02
MSH6-210ENST00000540021 PDIA3P30101 505 aaKnown RBP14.9□□□□□ -0.02
MSH6-210ENST00000540021 ZNF827Q17R98 1081 aa14.9□□□□□ -0.02
MSH6-210ENST00000540021 SMARCE1Q969G3 411 aa14.9□□□□□ -0.02
MSH6-210ENST00000540021 RAI14Q9P0K7 980 aa14.9□□□□□ -0.02
MSH6-210ENST00000540021 DACH1Q9UI36 760 aa14.9□□□□□ -0.02
MSH6-210ENST00000540021 PIK3C2BO00750 1634 aa14.9□□□□□ -0.02
MSH6-210ENST00000540021 KDRP35968 1356 aa14.9□□□□□ -0.02
MSH6-210ENST00000540021 SNRPA1P09661 255 aaKnown RBP14.9□□□□□ -0.02
MSH6-210ENST00000540021 OAS2P29728 719 aaKnown RBP14.9□□□□□ -0.02
MSH6-210ENST00000540021 PPP2R3AQ06190 1150 aa14.9□□□□□ -0.02
MSH6-210ENST00000540021 IQCB1Q15051 598 aa14.9□□□□□ -0.02
MSH6-210ENST00000540021 TMEM67Q5HYA8 995 aa14.9□□□□□ -0.02
MSH6-210ENST00000540021 MYSM1Q5VVJ2 828 aa14.9□□□□□ -0.02
MSH6-210ENST00000540021 ZNF496Q96IT1 587 aaPredicted RBP14.9□□□□□ -0.02
MSH6-210ENST00000540021 CLIC6Q96NY7 704 aa14.9□□□□□ -0.02
MSH6-210ENST00000540021 VPS18Q9P253 973 aa14.9□□□□□ -0.02
MSH6-210ENST00000540021 EIF3JO75822 258 aaKnown RBP14.89□□□□□ -0.03
MSH6-210ENST00000540021 GCP02774 474 aa14.89□□□□□ -0.03
MSH6-210ENST00000540021 GPTP24298 496 aa14.89□□□□□ -0.03
MSH6-210ENST00000540021 NLRP12P59046 1061 aa14.89□□□□□ -0.03
MSH6-210ENST00000540021 SART3Q15020 963 aaKnown RBP14.89□□□□□ -0.03
MSH6-210ENST00000540021 A0A1B0GUL7 405 aa14.89□□□□□ -0.03
MSH6-210ENST00000540021 HSPD1P10809 573 aaKnown RBP14.89□□□□□ -0.03
MSH6-210ENST00000540021 TDO2P48775 406 aa14.89□□□□□ -0.03
MSH6-210ENST00000540021 METTL22Q9BUU2 404 aaPredicted RBP14.89□□□□□ -0.03
MSH6-210ENST00000540021 IMPACTQ9P2X3 320 aa14.89□□□□□ -0.03
MSH6-210ENST00000540021 SLC12A7Q9Y666 1083 aa14.89□□□□□ -0.03
MSH6-210ENST00000540021 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.89□□□□□ -0.03
MSH6-210ENST00000540021 CDC25BP30305 580 aa14.89□□□□□ -0.03
MSH6-210ENST00000540021 GYS2P54840 703 aa14.89□□□□□ -0.03
MSH6-210ENST00000540021 NOM1Q5C9Z4 860 aaKnown RBP14.89□□□□□ -0.03
MSH6-210ENST00000540021 ACBD3Q9H3P7 528 aa14.89□□□□□ -0.03
MSH6-210ENST00000540021 ZCCHC17Q9NP64 241 aaKnown RBP14.89□□□□□ -0.03
MSH6-210ENST00000540021 FANCLQ9NW38 375 aa14.89□□□□□ -0.03
MSH6-210ENST00000540021 ARHGAP31Q2M1Z3 1444 aa14.89□□□□□ -0.03
MSH6-210ENST00000540021 ADD1P35611 737 aaKnown RBP14.88□□□□□ -0.03
MSH6-210ENST00000540021 CWC25Q9NXE8 425 aaPredicted RBP14.88□□□□□ -0.03
MSH6-210ENST00000540021 AIFM3Q96NN9 605 aa14.88□□□□□ -0.03
MSH6-210ENST00000540021 ABCA9Q8IUA7 1624 aa14.88□□□□□ -0.03
MSH6-210ENST00000540021 CAPN2P17655 700 aa14.87□□□□□ -0.03
MSH6-210ENST00000540021 DHX40Q8IX18 779 aaKnown RBP14.87□□□□□ -0.03
MSH6-210ENST00000540021 NAPBQ9H115 298 aa14.87□□□□□ -0.03
MSH6-210ENST00000540021 ZBTB43O43298 467 aa14.87□□□□□ -0.03
MSH6-210ENST00000540021 SLC9C2Q5TAH2 1124 aa14.87□□□□□ -0.03
MSH6-210ENST00000540021 TXLNBQ8N3L3 684 aa14.87□□□□□ -0.03
MSH6-210ENST00000540021 NUP88Q99567 741 aaPredicted RBP14.87□□□□□ -0.03
MSH6-210ENST00000540021 ZKSCAN3Q9BRR0 538 aa14.87□□□□□ -0.03
MSH6-210ENST00000540021 A2ML1A8K2U0 1454 aa14.87□□□□□ -0.03
MSH6-210ENST00000540021 MINDY4BA8MYZ0 360 aa14.87□□□□□ -0.03
MSH6-210ENST00000540021 NAP1L1P55209 391 aaKnown RBP14.87□□□□□ -0.03
MSH6-210ENST00000540021 CCZ1BP86790 482 aa14.87□□□□□ -0.03
MSH6-210ENST00000540021 CCZ1P86791 482 aaPredicted RBP14.87□□□□□ -0.03
MSH6-210ENST00000540021 SSRP1Q08945 709 aaKnown RBP14.87□□□□□ -0.03
MSH6-210ENST00000540021 ZNF569Q5MCW4 686 aa14.87□□□□□ -0.03
MSH6-210ENST00000540021 NFE2L3Q9Y4A8 694 aa14.87□□□□□ -0.03
MSH6-210ENST00000540021 A0A0G2JLW4 131 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 SYCP1Q15431 976 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 GOLGA1Q92805 767 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 MORC2Q9Y6X9 1032 aaPredicted RBP14.86□□□□□ -0.03
MSH6-210ENST00000540021 B4E1Z4 1266 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 IGKV5-2P06315 115 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 LONRF3Q496Y0 759 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 STOX1Q6ZVD7 989 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 BRAPQ7Z569 592 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 DHX58Q96C10 678 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 SRRTQ9BXP5 876 aaKnown RBP14.86□□□□□ -0.03
MSH6-210ENST00000540021 TMEM2Q9UHN6 1383 aa14.86□□□□□ -0.03
MSH6-210ENST00000540021 IL15P40933 162 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms