RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 IL1R1P14778 569 aa14.16□□□□□ -0.14
SPARC-207ENST00000537849 SEC62Q99442 399 aaKnown RBP14.16□□□□□ -0.14
SPARC-207ENST00000537849 TMX4Q9H1E5 349 aaPredicted RBP14.16□□□□□ -0.14
SPARC-207ENST00000537849 UPF2Q9HAU5 1272 aaKnown RBP14.16□□□□□ -0.14
SPARC-207ENST00000537849 HELLSQ9NRZ9 838 aa14.16□□□□□ -0.14
SPARC-207ENST00000537849 PIM2Q9P1W9 311 aa14.16□□□□□ -0.14
SPARC-207ENST00000537849 ZNF219Q9P2Y4 722 aaPredicted RBP14.16□□□□□ -0.14
SPARC-207ENST00000537849 MED23Q9ULK4 1368 aa14.16□□□□□ -0.14
SPARC-207ENST00000537849 DUOX1Q9NRD9 1551 aa14.16□□□□□ -0.14
SPARC-207ENST00000537849 DOCK2Q92608 1830 aa14.15□□□□□ -0.14
SPARC-207ENST00000537849 COL1A1P02452 1464 aaPredicted RBP14.15□□□□□ -0.14
SPARC-207ENST00000537849 TCRBV5S4A2TA0A5A2 114 aa14.15□□□□□ -0.14
SPARC-207ENST00000537849 RIMBP2O15034 1052 aa14.15□□□□□ -0.14
SPARC-207ENST00000537849 EPB41L2O43491 1005 aaKnown RBP14.15□□□□□ -0.14
SPARC-207ENST00000537849 C21orf2O43822 256 aa14.15□□□□□ -0.14
SPARC-207ENST00000537849 ZFYP08048 801 aaPredicted RBP14.15□□□□□ -0.14
SPARC-207ENST00000537849 ADD2P35612 726 aa14.15□□□□□ -0.14
SPARC-207ENST00000537849 RBM25P49756 843 aaKnown RBP14.15□□□□□ -0.14
SPARC-207ENST00000537849 MCMDC2Q4G0Z9 681 aa14.15□□□□□ -0.14
SPARC-207ENST00000537849 ZNF804AQ7Z570 1209 aa14.15□□□□□ -0.14
SPARC-207ENST00000537849 ZC3H12CQ9C0D7 883 aaKnown RBP14.15□□□□□ -0.14
SPARC-207ENST00000537849 LSG1Q9H089 658 aaKnown RBP14.15□□□□□ -0.14
SPARC-207ENST00000537849 SPON1Q9HCB6 807 aa14.15□□□□□ -0.14
SPARC-207ENST00000537849 BRCA1P38398 1863 aaKnown RBP14.14□□□□□ -0.15
SPARC-207ENST00000537849 PTH1RQ03431 593 aa14.14□□□□□ -0.15
SPARC-207ENST00000537849 UBE3CQ15386 1083 aa14.14□□□□□ -0.15
SPARC-207ENST00000537849 LRRFIP1Q32MZ4 808 aaKnown RBP14.14□□□□□ -0.15
SPARC-207ENST00000537849 GRIPAP1Q4V328 841 aa14.14□□□□□ -0.15
SPARC-207ENST00000537849 ZSCAN25Q6NSZ9 544 aa14.14□□□□□ -0.15
SPARC-207ENST00000537849 OSBP2Q969R2 916 aa14.14□□□□□ -0.15
SPARC-207ENST00000537849 WWC3Q9ULE0 1092 aa14.14□□□□□ -0.15
SPARC-207ENST00000537849 RAD50Q92878 1312 aa14.14□□□□□ -0.15
SPARC-207ENST00000537849 FRAT2O75474 233 aaPredicted RBP14.13□□□□□ -0.15
SPARC-207ENST00000537849 IDH1O75874 414 aaKnown RBP14.13□□□□□ -0.15
SPARC-207ENST00000537849 PDE6AP16499 860 aa14.13□□□□□ -0.15
SPARC-207ENST00000537849 MAP3K12Q12852 859 aa14.13□□□□□ -0.15
SPARC-207ENST00000537849 WASHC4Q2M389 1173 aa14.13□□□□□ -0.15
SPARC-207ENST00000537849 SLC9C2Q5TAH2 1124 aa14.13□□□□□ -0.15
SPARC-207ENST00000537849 ZNF589Q86UQ0 364 aaPredicted RBP14.13□□□□□ -0.15
SPARC-207ENST00000537849 EYA3Q99504 573 aa14.13□□□□□ -0.15
SPARC-207ENST00000537849 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.13□□□□□ -0.15
SPARC-207ENST00000537849 COA1Q9GZY4 146 aa14.13□□□□□ -0.15
SPARC-207ENST00000537849 M0R2C6 588 aa14.12□□□□□ -0.15
SPARC-207ENST00000537849 CHAF1AQ13111 956 aaPredicted RBP14.12□□□□□ -0.15
SPARC-207ENST00000537849 DALRD3Q5D0E6 543 aaKnown RBP14.12□□□□□ -0.15
SPARC-207ENST00000537849 CCDC129Q6ZRS4 1044 aa14.12□□□□□ -0.15
SPARC-207ENST00000537849 RTKN2Q8IZC4 609 aa14.12□□□□□ -0.15
SPARC-207ENST00000537849 WDR66Q8TBY9 1149 aa14.12□□□□□ -0.15
SPARC-207ENST00000537849 ZNF384Q8TF68 577 aa14.12□□□□□ -0.15
SPARC-207ENST00000537849 APPBP2Q92624 585 aa14.12□□□□□ -0.15
SPARC-207ENST00000537849 MAP4K1Q92918 833 aa14.12□□□□□ -0.15
SPARC-207ENST00000537849 KIF2CQ99661 725 aa14.12□□□□□ -0.15
SPARC-207ENST00000537849 ANO2Q9NQ90 1003 aa14.12□□□□□ -0.15
SPARC-207ENST00000537849 LRP2BPQ9P2M1 347 aa14.12□□□□□ -0.15
SPARC-207ENST00000537849 PPP1R1BQ9UD71 204 aaPredicted RBP14.12□□□□□ -0.15
SPARC-207ENST00000537849 FAM205AQ6ZU69 1335 aa14.12□□□□□ -0.15
SPARC-207ENST00000537849 ZNF532Q9HCE3 1301 aa14.12□□□□□ -0.15
SPARC-207ENST00000537849 SALL1Q9NSC2 1324 aa14.12□□□□□ -0.15
SPARC-207ENST00000537849 DOK7Q18PE1 504 aa14.11□□□□□ -0.15
SPARC-207ENST00000537849 CCDC93Q567U6 631 aa14.11□□□□□ -0.15
SPARC-207ENST00000537849 KIAA1211Q6ZU35 1233 aa14.11□□□□□ -0.15
SPARC-207ENST00000537849 PSMD1Q99460 953 aa14.11□□□□□ -0.15
SPARC-207ENST00000537849 PUS7LQ9H0K6 701 aaKnown RBP14.11□□□□□ -0.15
SPARC-207ENST00000537849 ABCF2Q9UG63 623 aa14.11□□□□□ -0.15
SPARC-207ENST00000537849 MAST3O60307 1309 aa14.11□□□□□ -0.15
SPARC-207ENST00000537849 CCDC88AQ3V6T2 1871 aa14.1□□□□□ -0.15
SPARC-207ENST00000537849 ERICH6Q7L0X2 663 aa14.1□□□□□ -0.15
SPARC-207ENST00000537849 MAGEB6Q8N7X4 407 aa14.1□□□□□ -0.15
SPARC-207ENST00000537849 SUPT20HQ8NEM7 779 aa14.1□□□□□ -0.15
SPARC-207ENST00000537849 NLGN2Q8NFZ4 835 aa14.1□□□□□ -0.15
SPARC-207ENST00000537849 KCNB2Q92953 911 aa14.1□□□□□ -0.15
SPARC-207ENST00000537849 IL17RAQ96F46 866 aa14.1□□□□□ -0.15
SPARC-207ENST00000537849 JAG2Q9Y219 1238 aa14.1□□□□□ -0.15
SPARC-207ENST00000537849 CCDC171Q6TFL3 1326 aa14.1□□□□□ -0.15
SPARC-207ENST00000537849 IGSF3O75054 1194 aa14.09□□□□□ -0.15
SPARC-207ENST00000537849 CYP7A1P22680 504 aa14.09□□□□□ -0.15
SPARC-207ENST00000537849 HSPA4P34932 840 aa14.09□□□□□ -0.15
SPARC-207ENST00000537849 KIAA2012Q0VF49 1180 aa14.09□□□□□ -0.15
SPARC-207ENST00000537849 NECTIN1Q15223 517 aa14.09□□□□□ -0.15
SPARC-207ENST00000537849 GRIK5Q16478 980 aa14.09□□□□□ -0.15
SPARC-207ENST00000537849 SOGA3Q5TF21 947 aa14.09□□□□□ -0.15
SPARC-207ENST00000537849 SPTY2D1Q68D10 685 aaPredicted RBP14.09□□□□□ -0.15
SPARC-207ENST00000537849 PODNQ7Z5L7 613 aa14.09□□□□□ -0.15
SPARC-207ENST00000537849 NSUN4Q96CB9 384 aaKnown RBP14.09□□□□□ -0.15
SPARC-207ENST00000537849 RAI14Q9P0K7 980 aa14.09□□□□□ -0.15
SPARC-207ENST00000537849 FER1L6Q2WGJ9 1857 aa14.08□□□□□ -0.16
SPARC-207ENST00000537849 PRDX5P30044 214 aa14.08□□□□□ -0.16
SPARC-207ENST00000537849 GTF2IP78347 998 aa14.08□□□□□ -0.16
SPARC-207ENST00000537849 MECOMQ03112 1051 aa14.08□□□□□ -0.16
SPARC-207ENST00000537849 VPS53Q5VIR6 699 aa14.08□□□□□ -0.16
SPARC-207ENST00000537849 KLHL34Q8N239 644 aa14.08□□□□□ -0.16
SPARC-207ENST00000537849 ZGPATQ8N5A5 531 aaKnown RBP14.08□□□□□ -0.16
SPARC-207ENST00000537849 STRBPQ96SI9 672 aaKnown RBP14.08□□□□□ -0.16
SPARC-207ENST00000537849 VPS33BQ9H267 617 aa14.08□□□□□ -0.16
SPARC-207ENST00000537849 KCNQ5Q9NR82 932 aa14.08□□□□□ -0.16
SPARC-207ENST00000537849 SCN9AQ15858 1988 aa14.08□□□□□ -0.16
SPARC-207ENST00000537849 FOXP2O15409 715 aa14.07□□□□□ -0.16
SPARC-207ENST00000537849 GPAA1O43292 621 aa14.07□□□□□ -0.16
SPARC-207ENST00000537849 HSPD1P10809 573 aaKnown RBP14.07□□□□□ -0.16
SPARC-207ENST00000537849 AOC3Q16853 763 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms