RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 MICALCLQ6ZW33 695 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.83□□□□□ -1.161e-7■■■■□ 19.9
TGFBR3-209ENST00000532540 ABCF2Q9UG63 623 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 PARP3Q9Y6F1 533 aa7.83□□□□□ -1.16
TGFBR3-209ENST00000532540 MEGF6O75095 1541 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 TRIM66O15016 1216 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 CTIFO43310 598 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 EIF5P55010 431 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 TYRO3Q06418 890 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 LRMPQ12912 555 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 IFIT5Q13325 482 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 PKP1Q13835 747 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 CLEC17AQ6ZS10 378 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 FBXO18Q8NFZ0 1043 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 SUFUQ9UMX1 484 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 BLMP54132 1417 aaPredicted RBP7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 EVCP57679 992 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 NAA30Q147X3 362 aaPredicted RBP7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 KMT5BQ4FZB7 885 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 LARP1BQ659C4 914 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 LUZP1Q86V48 1076 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 CNBD1Q8NA66 436 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 NCOA3Q9Y6Q9 1424 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 GOLGA6L7A0A1B0GV03 622 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 F8W031 263 aaPredicted RBP7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 SNAP23O00161 211 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 STX6O43752 255 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 BIRC2Q13490 618 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 PDRG1Q9NUG6 133 aa7.82□□□□□ -1.16
TGFBR3-209ENST00000532540 CDK12Q9NYV4 1490 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 TAF5LO75529 589 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 MMP10P09238 476 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 ARID4AP29374 1257 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 SLFNL1Q499Z3 407 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 ZSCAN25Q6NSZ9 544 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 TPTE2Q6XPS3 522 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 AACSQ86V21 672 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 CEP57Q86XR8 500 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 CCDC150Q8NCX0 1101 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 SCAND2PQ9GZW5 306 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 MTMR7Q9Y216 660 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 GRM8O00222 908 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 ATP8B1O43520 1251 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 PNMA6AP0CW24 399 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 ZSCAN22P10073 491 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 NAA25Q14CX7 972 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 MAP9Q49MG5 647 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 RNF187Q5TA31 235 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 POTEDQ86YR6 584 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 EXOC4Q96A65 974 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 NLRP3Q96P20 1036 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 CEP126Q9P2H0 1117 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 BCS1LQ9Y276 419 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 NDUFB9Q9Y6M9 179 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 ELP1O95163 1332 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 NBPF26B4DH59 902 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 PHACTR2O75167 634 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 GADD45BO75293 160 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 CD2BP2O95400 341 aaKnown RBP7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 SERPINC1P01008 464 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 ATP2B1P20020 1258 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 POLD1P28340 1107 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 IGHMBP2P38935 993 aaKnown RBP7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 RBM5P52756 815 aaKnown RBP eCLIP7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 NBPF10Q6P3W6 841 aaKnown RBP7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 EFCAB13Q8IY85 973 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 CLASRPQ8N2M8 674 aaKnown RBP7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 NBPF15Q8N660 670 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 RUFY2Q8WXA3 655 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 ARHGEF1Q92888 912 aaKnown RBP7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 UTP14AQ9BVJ6 771 aaKnown RBP7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 ANO10Q9NW15 660 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 RAI14Q9P0K7 980 aa7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 RGS17Q9UGC6 210 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-209ENST00000532540 CAMTA1Q9Y6Y1 1673 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 CLNS1AP54105 237 aaKnown RBP7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 WASHC4Q2M389 1173 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 MUM1L1Q5H9M0 696 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 DDX46Q7L014 1031 aaKnown RBP7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 SRLQ86TD4 932 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 OTUD6BQ8N6M0 293 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 LINC00116Q8NCU8 138 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 INTS4Q96HW7 963 aaKnown RBP7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 BICC1Q9H694 974 aaKnown RBP7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 VEZTQ9HBM0 779 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 IQSEC2Q5JU85 1478 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 INPP5BP32019 993 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 ZNF75DP51815 510 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 GYS2P54840 703 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 GNG11P61952 73 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 ALDH1L2Q3SY69 923 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 FERMT3Q86UX7 667 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 C16orf71Q8IYS4 520 aaPredicted RBP7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 IL16Q14005 1332 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 RGPD8O14715 1765 aaPredicted RBP7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 CBFA2T2O43439 604 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 BRPF1P55201 1214 aaPredicted RBP7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 HDXQ7Z353 690 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 TMC6Q7Z403 805 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms