RNA–Protein interactions for RNA: ENST00000531206.5

CDC27-207, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-207ENST00000531206 FSTL1Q12841 308 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 STRN3Q13033 797 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 NBPF8Q3BBV2 869 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 NBPF14Q5TI25 921 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 ZNF746Q6NUN9 644 aaPredicted RBP4.08□□□□□ -1.76
CDC27-207ENST00000531206 COL23A1Q86Y22 540 aaPredicted RBP4.08□□□□□ -1.76
CDC27-207ENST00000531206 CCDC24Q8N4L8 307 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 FBXO27Q8NI29 283 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 MORC4Q8TE76 937 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 CLP1Q92989 425 aaKnown RBP4.08□□□□□ -1.76
CDC27-207ENST00000531206 EYA1Q99502 592 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 AS3MTQ9HBK9 375 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 SPG7Q9UQ90 795 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 NHSQ6T4R5 1651 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 DKK1O94907 266 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 IGHA2P01877 340 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 ATF4P18848 351 aaPredicted RBP4.08□□□□□ -1.76
CDC27-207ENST00000531206 SQSTM1Q13501 440 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 SLF2Q8IX21 1173 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 TRIM55Q9BYV6 548 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 LATS2Q9NRM7 1088 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 FOXD3Q9UJU5 478 aaPredicted RBP4.08□□□□□ -1.76
CDC27-207ENST00000531206 HCN4Q9Y3Q4 1203 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 PIK3C2AO00443 1686 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 LMO7Q8WWI1 1683 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 PLSCR1O15162 318 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 TREHO43280 583 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 TLL1O43897 1013 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 CFHP08603 1231 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 ATF3P18847 181 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 IL17RAQ96F46 866 aa4.08□□□□□ -1.76
CDC27-207ENST00000531206 PATL2C9JE40 543 aaKnown RBP4.07□□□□□ -1.76
CDC27-207ENST00000531206 hCG_1984214I3L0E3 225 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 AGR2O95994 175 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 EZH2Q15910 746 aaKnown RBP4.07□□□□□ -1.76
CDC27-207ENST00000531206 HSP90AB4PQ58FF6 505 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 ESCO1Q5FWF5 840 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 C6orf118Q5T5N4 469 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 LRRC69Q6ZNQ3 347 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 SAMD7Q7Z3H4 446 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 STRA8Q7Z7C7 330 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 ETFBKMTQ8IXQ9 262 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 PLD6Q8N2A8 252 aaKnown RBP4.07□□□□□ -1.76
CDC27-207ENST00000531206 TRIM8Q9BZR9 551 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 HDAC9Q9UKV0 1011 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 PCDHGB3Q9Y5G1 929 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 METTL12A8MUP2 240 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 FZD6O60353 706 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 ADD2P35612 726 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 RGL4Q8IZJ4 473 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 ANTXR1Q9H6X2 564 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 SRA1Q9HD15 236 aaKnown RBP4.07□□□□□ -1.76
CDC27-207ENST00000531206 WASHC2CQ9Y4E1 1318 aa4.07□□□□□ -1.76
CDC27-207ENST00000531206 LRRC37A3O60309 1634 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 GRIN3BO60391 1043 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 ALDH1L1O75891 902 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 MYCLP1P12525 358 aaPredicted RBP4.06□□□□□ -1.76
CDC27-207ENST00000531206 TTF1Q15361 905 aaPredicted RBP4.06□□□□□ -1.76
CDC27-207ENST00000531206 LMBRD2Q68DH5 695 aaPredicted RBP4.06□□□□□ -1.76
CDC27-207ENST00000531206 MPRIPQ6WCQ1 1025 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 BNC2Q6ZN30 1099 aaPredicted RBP4.06□□□□□ -1.76
CDC27-207ENST00000531206 SUGP1Q8IWZ8 645 aaKnown RBP4.06□□□□□ -1.76
CDC27-207ENST00000531206 TATDN2Q93075 761 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 VTA1Q9NP79 307 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 NPHS2Q9NP85 383 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 DIS3Q9Y2L1 958 aaKnown RBP4.06□□□□□ -1.76
CDC27-207ENST00000531206 USP54Q70EL1 1684 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 AKAP12Q02952 1782 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 RIMS2Q9UQ26 1411 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.06□□□□□ -1.76
CDC27-207ENST00000531206 PDGFRBP09619 1106 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 L1CAMP32004 1257 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 SEC13P55735 322 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 LONRF1Q17RB8 773 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 TUBB8Q3ZCM7 444 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 ZSCAN29Q8IWY8 852 aaPredicted RBP4.06□□□□□ -1.76
CDC27-207ENST00000531206 DEPDC7Q96QD5 511 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 TMPRSS4Q9NRS4 437 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 GNL3LQ9NVN8 582 aaKnown RBP4.06□□□□□ -1.76
CDC27-207ENST00000531206 TPX2Q9ULW0 747 aaKnown RBP4.06□□□□□ -1.76
CDC27-207ENST00000531206 SBNO1A3KN83 1393 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 NPHP1O15259 732 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 CDC45O75419 566 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 ARID5BQ14865 1188 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 BRDTQ58F21 947 aaPredicted RBP4.06□□□□□ -1.76
CDC27-207ENST00000531206 RNF187Q5TA31 235 aaPredicted RBP4.06□□□□□ -1.76
CDC27-207ENST00000531206 FAM196AQ6ZSG2 479 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 GINM1Q9NU53 330 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 DDX41Q9UJV9 622 aaKnown RBP4.06□□□□□ -1.76
CDC27-207ENST00000531206 EDARQ9UNE0 448 aa4.06□□□□□ -1.76
CDC27-207ENST00000531206 BRCA1P38398 1863 aaKnown RBP4.06□□□□□ -1.76
CDC27-207ENST00000531206 ARFGEF1Q9Y6D6 1849 aa4.05□□□□□ -1.76
CDC27-207ENST00000531206 PHRF1Q9P1Y6 1649 aaKnown RBP4.05□□□□□ -1.76
CDC27-207ENST00000531206 ACPPP15309 386 aa4.05□□□□□ -1.76
CDC27-207ENST00000531206 BDNFP23560 247 aa4.05□□□□□ -1.76
CDC27-207ENST00000531206 ID4P47928 161 aa4.05□□□□□ -1.76
CDC27-207ENST00000531206 COPS2P61201 443 aa4.05□□□□□ -1.76
CDC27-207ENST00000531206 COX20Q5RI15 118 aa4.05□□□□□ -1.76
CDC27-207ENST00000531206 PTCRAQ6ISU1 281 aaPredicted RBP4.05□□□□□ -1.76
CDC27-207ENST00000531206 GGT6Q6P531 493 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms