RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 RAD17O75943 681 aa20.7■□□□□ 0.9
SF3B2-211ENST00000531041 RASGRF1Q13972 1273 aa20.7■□□□□ 0.9
SF3B2-211ENST00000531041 STRIP1Q5VSL9 837 aa20.7■□□□□ 0.9
SF3B2-211ENST00000531041 TTLL5Q6EMB2 1281 aa20.7■□□□□ 0.9
SF3B2-211ENST00000531041 CIAPIN1Q6FI81 312 aa20.7■□□□□ 0.9
SF3B2-211ENST00000531041 USP17L1Q7RTZ2 530 aa20.7■□□□□ 0.9
SF3B2-211ENST00000531041 OTUD7AQ8TE49 926 aaPredicted RBP20.7■□□□□ 0.9
SF3B2-211ENST00000531041 GPATCH3Q96I76 525 aa20.7■□□□□ 0.9
SF3B2-211ENST00000531041 ECHDC1Q9NTX5 307 aa20.7■□□□□ 0.9
SF3B2-211ENST00000531041 DOCK2Q92608 1830 aa20.7■□□□□ 0.9
SF3B2-211ENST00000531041 TTC41PQ6P2S7 1318 aa20.7■□□□□ 0.9
SF3B2-211ENST00000531041 ATP5JP18859 108 aa20.7■□□□□ 0.9
SF3B2-211ENST00000531041 MX1P20591 662 aa20.7■□□□□ 0.9
SF3B2-211ENST00000531041 MCAMP43121 646 aa20.7■□□□□ 0.9
SF3B2-211ENST00000531041 GTF2IP78347 998 aa20.7■□□□□ 0.9
SF3B2-211ENST00000531041 TNIP1Q15025 636 aa20.7■□□□□ 0.9
SF3B2-211ENST00000531041 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.7■□□□□ 0.9
SF3B2-211ENST00000531041 MYH7P12883 1935 aa20.69■□□□□ 0.9
SF3B2-211ENST00000531041 AK9Q5TCS8 1911 aa20.69■□□□□ 0.9
SF3B2-211ENST00000531041 ZNF541Q9H0D2 1346 aa20.69■□□□□ 0.9
SF3B2-211ENST00000531041 VIL1P09327 827 aaKnown RBP20.69■□□□□ 0.9
SF3B2-211ENST00000531041 SCARF1Q14162 830 aa20.69■□□□□ 0.9
SF3B2-211ENST00000531041 HMG20BQ9P0W2 317 aa20.69■□□□□ 0.9
SF3B2-211ENST00000531041 STAP2Q9UGK3 403 aa20.69■□□□□ 0.9
SF3B2-211ENST00000531041 PSMD14O00487 310 aa20.68■□□□□ 0.9
SF3B2-211ENST00000531041 PDE1AP54750 535 aa20.68■□□□□ 0.9
SF3B2-211ENST00000531041 FKBP1AP62942 108 aaKnown RBP20.68■□□□□ 0.9
SF3B2-211ENST00000531041 DACT2Q5SW24 774 aa20.68■□□□□ 0.9
SF3B2-211ENST00000531041 GPC2Q8N158 579 aa20.68■□□□□ 0.9
SF3B2-211ENST00000531041 SPATA5Q8NB90 893 aa20.68■□□□□ 0.9
SF3B2-211ENST00000531041 GTF3C3Q9Y5Q9 886 aa20.68■□□□□ 0.9
SF3B2-211ENST00000531041 PDE4AP27815 886 aa20.67■□□□□ 0.9
SF3B2-211ENST00000531041 DPY19L2Q6NUT2 758 aa20.67■□□□□ 0.9
SF3B2-211ENST00000531041 PLEKHM2Q8IWE5 1019 aa20.67■□□□□ 0.9
SF3B2-211ENST00000531041 WDR66Q8TBY9 1149 aa20.67■□□□□ 0.9
SF3B2-211ENST00000531041 TBC1D22AQ8WUA7 517 aa20.67■□□□□ 0.9
SF3B2-211ENST00000531041 SCN4AP35499 1836 aa20.67■□□□□ 0.9
SF3B2-211ENST00000531041 ERC2O15083 957 aa20.66■□□□□ 0.9
SF3B2-211ENST00000531041 CHAF1AQ13111 956 aaPredicted RBP20.66■□□□□ 0.9
SF3B2-211ENST00000531041 PI16Q6UXB8 463 aa20.66■□□□□ 0.9
SF3B2-211ENST00000531041 FBXW7Q969H0 707 aa20.66■□□□□ 0.9
SF3B2-211ENST00000531041 OSBPL3Q9H4L5 887 aa20.66■□□□□ 0.9
SF3B2-211ENST00000531041 AOX1Q06278 1338 aa20.65■□□□□ 0.9
SF3B2-211ENST00000531041 MYO3BQ8WXR4 1341 aa20.65■□□□□ 0.9
SF3B2-211ENST00000531041 SALL1Q9NSC2 1324 aa20.65■□□□□ 0.9
SF3B2-211ENST00000531041 WDR90Q96KV7 1748 aa20.65■□□□□ 0.9
SF3B2-211ENST00000531041 GLTPD2A6NH11 291 aa20.65■□□□□ 0.9
SF3B2-211ENST00000531041 RSBN1LQ6PCB5 846 aaPredicted RBP20.65■□□□□ 0.9
SF3B2-211ENST00000531041 PI4K2BQ8TCG2 481 aa20.65■□□□□ 0.9
SF3B2-211ENST00000531041 JAG2Q9Y219 1238 aa20.65■□□□□ 0.9
SF3B2-211ENST00000531041 MYH2Q9UKX2 1941 aa20.65■□□□□ 0.9
SF3B2-211ENST00000531041 GLRX3O76003 335 aaKnown RBP20.64■□□□□ 0.89
SF3B2-211ENST00000531041 MFSD14BQ5SR56 506 aa20.64■□□□□ 0.89
SF3B2-211ENST00000531041 TSHZ3Q63HK5 1081 aa20.64■□□□□ 0.89
SF3B2-211ENST00000531041 AGBL3Q8NEM8 1001 aa20.64■□□□□ 0.89
SF3B2-211ENST00000531041 HAUS7Q99871 368 aa20.64■□□□□ 0.89
SF3B2-211ENST00000531041 BOLA2Q9H3K6 86 aa20.64■□□□□ 0.89
SF3B2-211ENST00000531041 SNRKQ9NRH2 765 aa20.64■□□□□ 0.89
SF3B2-211ENST00000531041 GJA3Q9Y6H8 435 aa20.64■□□□□ 0.89
SF3B2-211ENST00000531041 DDNO94850 711 aaPredicted RBP20.63■□□□□ 0.89
SF3B2-211ENST00000531041 CYP2E1P05181 493 aaPredicted RBP20.63■□□□□ 0.89
SF3B2-211ENST00000531041 RPS12P25398 132 aaKnown RBP20.63■□□□□ 0.89
SF3B2-211ENST00000531041 ZAP70P43403 619 aa20.63■□□□□ 0.89
SF3B2-211ENST00000531041 ZGPATQ8N5A5 531 aaKnown RBP20.63■□□□□ 0.89
SF3B2-211ENST00000531041 CERS5Q8N5B7 392 aa20.63■□□□□ 0.89
SF3B2-211ENST00000531041 GMLQ99445 158 aa20.63■□□□□ 0.89
SF3B2-211ENST00000531041 MAST2Q6P0Q8 1798 aa20.63■□□□□ 0.89
SF3B2-211ENST00000531041 DPF2Q92785 391 aa20.62■□□□□ 0.89
SF3B2-211ENST00000531041 MXD3Q9BW11 206 aa20.62■□□□□ 0.89
SF3B2-211ENST00000531041 SUGT1Q9Y2Z0 365 aa20.62■□□□□ 0.89
SF3B2-211ENST00000531041 ZBTB12Q9Y330 459 aaPredicted RBP20.62■□□□□ 0.89
SF3B2-211ENST00000531041 GMPSP49915 693 aaPredicted RBP20.61■□□□□ 0.89
SF3B2-211ENST00000531041 L3MBTL3Q96JM7 780 aaPredicted RBP20.61■□□□□ 0.89
SF3B2-211ENST00000531041 DNAJC2Q99543 621 aaKnown RBP20.61■□□□□ 0.89
SF3B2-211ENST00000531041 NDUFB9Q9Y6M9 179 aa20.61■□□□□ 0.89
SF3B2-211ENST00000531041 ECM29Q5VYK3 1845 aa20.6■□□□□ 0.89
SF3B2-211ENST00000531041 TTF1Q15361 905 aaPredicted RBP20.6■□□□□ 0.89
SF3B2-211ENST00000531041 SPTY2D1Q68D10 685 aaPredicted RBP20.6■□□□□ 0.89
SF3B2-211ENST00000531041 TBC1D9Q6ZT07 1266 aa20.6■□□□□ 0.89
SF3B2-211ENST00000531041 PAG1Q9NWQ8 432 aa20.6■□□□□ 0.89
SF3B2-211ENST00000531041 ABCF2Q9UG63 623 aa20.6■□□□□ 0.89
SF3B2-211ENST00000531041 ADAMTSL1Q8N6G6 1762 aa20.59■□□□□ 0.89
SF3B2-211ENST00000531041 IGSF3O75054 1194 aa20.59■□□□□ 0.89
SF3B2-211ENST00000531041 PRDX5P30044 214 aa20.59■□□□□ 0.89
SF3B2-211ENST00000531041 MMP14P50281 582 aa20.59■□□□□ 0.89
SF3B2-211ENST00000531041 SCNN1DP51172 638 aa20.59■□□□□ 0.89
SF3B2-211ENST00000531041 GRIK5Q16478 980 aa20.59■□□□□ 0.89
SF3B2-211ENST00000531041 ANTXR1Q9H6X2 564 aa20.59■□□□□ 0.89
SF3B2-211ENST00000531041 GOLIM4O00461 696 aa20.58■□□□□ 0.88
SF3B2-211ENST00000531041 LDHBP07195 334 aaKnown RBP20.58■□□□□ 0.88
SF3B2-211ENST00000531041 ERICH6Q7L0X2 663 aa20.58■□□□□ 0.88
SF3B2-211ENST00000531041 KIAA0825Q8IV33 1275 aa20.58■□□□□ 0.88
SF3B2-211ENST00000531041 GPRC5DQ9NZD1 345 aa20.58■□□□□ 0.88
SF3B2-211ENST00000531041 USP17L8P0C7I0 530 aa20.57■□□□□ 0.88
SF3B2-211ENST00000531041 EDC3Q96F86 508 aaKnown RBP20.57■□□□□ 0.88
SF3B2-211ENST00000531041 PIH1D3Q9NQM4 214 aaKnown RBP20.57■□□□□ 0.88
SF3B2-211ENST00000531041 LRP2BPQ9P2M1 347 aa20.57■□□□□ 0.88
SF3B2-211ENST00000531041 CNOT7Q9UIV1 285 aaKnown RBP20.57■□□□□ 0.88
SF3B2-211ENST00000531041 ZNF280AP59817 542 aaPredicted RBP20.56■□□□□ 0.88
SF3B2-211ENST00000531041 SKAP1Q86WV1 359 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms