RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 ANKRD36BQ8N2N9 1353 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 WDR66Q8TBY9 1149 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 MAP2K2P36507 400 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 ZSCAN26Q16670 478 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 MIPOL1Q8TD10 442 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 TBC1D5Q92609 795 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 PPP1R1BQ9UD71 204 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-223ENST00000529986 AKR1B15C9JRZ8 316 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-223ENST00000529986 WTAPQ15007 396 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 PPFIBP2Q8ND30 876 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 USP26Q9BXU7 913 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 KAT14Q9H8E8 782 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 CBX8Q9HC52 389 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 DBF4Q9UBU7 674 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-223ENST00000529986 FEZ2Q9UHY8 353 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-223ENST00000529986 ZNF518AQ6AHZ1 1483 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 SLC5A1P13866 664 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 ANKRD44Q8N8A2 993 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 MRRFQ96E11 262 aaKnown RBP8.63□□□□□ -1.03
CTNND1-223ENST00000529986 TSNARE1Q96NA8 513 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 PYM1Q9BRP8 204 aaKnown RBP8.63□□□□□ -1.03
CTNND1-223ENST00000529986 DDX23Q9BUQ8 820 aaKnown RBP8.63□□□□□ -1.03
CTNND1-223ENST00000529986 PLEKHA4Q9H4M7 779 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 MRVI1Q9Y6F6 885 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 ZNF75DP51815 510 aa8.62□□□□□ -1.03
CTNND1-223ENST00000529986 INTS8Q75QN2 995 aaKnown RBP8.62□□□□□ -1.03
CTNND1-223ENST00000529986 FAM114A2Q9NRY5 505 aa8.62□□□□□ -1.03
CTNND1-223ENST00000529986 TRMT112Q9UI30 125 aaKnown RBP8.62□□□□□ -1.03
CTNND1-223ENST00000529986 LUC7L2Q9Y383 392 aaKnown RBP8.62□□□□□ -1.03
CTNND1-223ENST00000529986 PTPDC1A2A3K4 754 aa8.62□□□□□ -1.03
CTNND1-223ENST00000529986 ATP11AP98196 1134 aa8.62□□□□□ -1.03
CTNND1-223ENST00000529986 PLCB3Q01970 1234 aa8.62□□□□□ -1.03
CTNND1-223ENST00000529986 UTP14CQ5TAP6 766 aaKnown RBP8.62□□□□□ -1.03
CTNND1-223ENST00000529986 PA2G4Q9UQ80 394 aaKnown RBP8.62□□□□□ -1.03
CTNND1-223ENST00000529986 TMCO4Q5TGY1 634 aa8.62□□□□□ -1.03
CTNND1-223ENST00000529986 CCDC50Q8IVM0 306 aa8.62□□□□□ -1.03
CTNND1-223ENST00000529986 CUL5Q93034 780 aa8.62□□□□□ -1.03
CTNND1-223ENST00000529986 STMN2Q93045 179 aa8.62□□□□□ -1.03
CTNND1-223ENST00000529986 PSMB7Q99436 277 aa8.62□□□□□ -1.03
CTNND1-223ENST00000529986 TACO1Q9BSH4 297 aaKnown RBP8.62□□□□□ -1.03
CTNND1-223ENST00000529986 ADGRL2O95490 1459 aa8.62□□□□□ -1.03
CTNND1-223ENST00000529986 A2MP01023 1474 aa8.62□□□□□ -1.03
CTNND1-223ENST00000529986 NUTM2BA6NNL0 878 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-223ENST00000529986 NUTM2EB1AL46 878 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-223ENST00000529986 EEF2P13639 858 aaKnown RBP8.62□□□□□ -1.03
CTNND1-223ENST00000529986 MYL5Q02045 173 aa8.62□□□□□ -1.03
CTNND1-223ENST00000529986 RTN1Q16799 776 aa8.62□□□□□ -1.03
CTNND1-223ENST00000529986 NUTM2AQ8IVF1 878 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-223ENST00000529986 NAPGQ99747 312 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-223ENST00000529986 VPS16Q9H269 839 aa8.62□□□□□ -1.03
CTNND1-223ENST00000529986 TBCAO75347 108 aaKnown RBP8.61□□□□□ -1.03
CTNND1-223ENST00000529986 POTEDQ86YR6 584 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 CFAP57Q96MR6 1250 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 SAMM50Q9Y512 469 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 ASXL2Q76L83 1435 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 ARL1P40616 181 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-223ENST00000529986 CREB3L3Q68CJ9 461 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 PPP4R3AQ6IN85 833 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 LDHAL6AQ6ZMR3 332 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 PLEKHM2Q8IWE5 1019 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 IGSF22Q8N9C0 903 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 C8orf58Q8NAV2 365 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 PLVAPQ9BX97 442 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 CWC25Q9NXE8 425 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-223ENST00000529986 TRIM31Q9BZY9 425 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 ANKIB1Q9P2G1 1089 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 BAIAP2L1Q9UHR4 511 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 STARD3NLO95772 234 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 ZFYP08048 801 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-223ENST00000529986 TNNC1P63316 161 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 PPP1R7Q15435 360 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 CEP85LQ5SZL2 805 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 SEPT14Q6ZU15 432 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 LMNTD2Q8IXW0 634 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 STX8Q9UNK0 236 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 DISP1Q96F81 1524 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 WASLO00401 505 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-223ENST00000529986 NBPF7P0C2Y1 421 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-223ENST00000529986 ZNF445P59923 1031 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 MCMDC2Q4G0Z9 681 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 HEATR3Q7Z4Q2 680 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 HOMEZQ8IX15 550 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 MRPL50Q8N5N7 158 aaKnown RBP8.61□□□□□ -1.03
CTNND1-223ENST00000529986 KCNH5Q8NCM2 988 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 PARD3Q8TEW0 1356 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 MAST1Q9Y2H9 1570 aa8.61□□□□□ -1.03
CTNND1-223ENST00000529986 FRMD3A2A2Y4 597 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 TUBB4BP68371 445 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 IDI1Q13907 227 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 ERCC6LQ2NKX8 1250 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 C8orf74Q6P047 294 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 TRIM75PA6NK02 468 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 MAP3K9P80192 1104 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 FANCCQ00597 558 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-223ENST00000529986 CNGA4Q8IV77 575 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 INTS4Q96HW7 963 aaKnown RBP8.6□□□□□ -1.03
CTNND1-223ENST00000529986 CABS1Q96KC9 395 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 TMEM63CQ9P1W3 806 aa8.6□□□□□ -1.03
CTNND1-223ENST00000529986 MAPK8IP1Q9UQF2 711 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms