RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 TWISTNBQ3B726 338 aaPredicted RBP18.82■□□□□ 0.6
CSTF3-204ENST00000524556 CLMNQ96JQ2 1002 aa18.82■□□□□ 0.6
CSTF3-204ENST00000524556 PPP2R3BQ9Y5P8 575 aa18.82■□□□□ 0.6
CSTF3-204ENST00000524556 SSC5DA1L4H1 1573 aa18.81■□□□□ 0.6
CSTF3-204ENST00000524556 A0A1B0GUL6 1792 aa18.81■□□□□ 0.6
CSTF3-204ENST00000524556 IGF2BP3O00425 579 aaKnown RBP eCLIP18.81■□□□□ 0.6
CSTF3-204ENST00000524556 INTS3Q68E01 1043 aaKnown RBP18.81■□□□□ 0.6
CSTF3-204ENST00000524556 C15orf52Q6ZUT6 534 aaKnown RBP18.81■□□□□ 0.6
CSTF3-204ENST00000524556 OTOP1Q7RTM1 612 aa18.81■□□□□ 0.6
CSTF3-204ENST00000524556 MYH16Q9H6N6 1097 aa18.81■□□□□ 0.6
CSTF3-204ENST00000524556 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.81■□□□□ 0.6
CSTF3-204ENST00000524556 PCDHAC2Q9Y5I4 1007 aa18.81■□□□□ 0.6
CSTF3-204ENST00000524556 ANKRD18BA2A2Z9 1011 aa18.8■□□□□ 0.6
CSTF3-204ENST00000524556 SNAP23O00161 211 aa18.8■□□□□ 0.6
CSTF3-204ENST00000524556 TAF5LO75529 589 aa18.8■□□□□ 0.6
CSTF3-204ENST00000524556 SUPT20HL1Q3ZLR7 823 aa18.8■□□□□ 0.6
CSTF3-204ENST00000524556 GCC1Q96CN9 775 aa18.8■□□□□ 0.6
CSTF3-204ENST00000524556 BRCA2P51587 3418 aa18.8■□□□□ 0.6
CSTF3-204ENST00000524556 SPDYE2BA6NHP3 402 aa18.79■□□□□ 0.6
CSTF3-204ENST00000524556 F8W031 263 aaPredicted RBP18.79■□□□□ 0.6
CSTF3-204ENST00000524556 MYO1BO43795 1136 aa18.79■□□□□ 0.6
CSTF3-204ENST00000524556 SPDYE6P0CI01 402 aa18.79■□□□□ 0.6
CSTF3-204ENST00000524556 IL1R1P14778 569 aa18.79■□□□□ 0.6
CSTF3-204ENST00000524556 FKBP1AP62942 108 aaKnown RBP18.79■□□□□ 0.6
CSTF3-204ENST00000524556 FLIIQ13045 1269 aa18.79■□□□□ 0.6
CSTF3-204ENST00000524556 CFAP100Q494V2 611 aa18.79■□□□□ 0.6
CSTF3-204ENST00000524556 HELBQ8NG08 1087 aaPredicted RBP18.79■□□□□ 0.6
CSTF3-204ENST00000524556 LINS1Q8NG48 757 aa18.79■□□□□ 0.6
CSTF3-204ENST00000524556 DNAAF4Q8WXU2 420 aa18.79■□□□□ 0.6
CSTF3-204ENST00000524556 PRMT6Q96LA8 375 aaPredicted RBP18.79■□□□□ 0.6
CSTF3-204ENST00000524556 KIAA0100Q14667 2235 aaKnown RBP18.79■□□□□ 0.6
CSTF3-204ENST00000524556 RBBP6Q7Z6E9 1792 aaKnown RBP18.78■□□□□ 0.6
CSTF3-204ENST00000524556 CLRN2A0PK11 232 aa18.78■□□□□ 0.6
CSTF3-204ENST00000524556 POTEFA5A3E0 1075 aa18.78■□□□□ 0.6
CSTF3-204ENST00000524556 CCDC27Q2M243 656 aa18.78■□□□□ 0.6
CSTF3-204ENST00000524556 NBPF12Q5TAG4 269 aaPredicted RBP18.78■□□□□ 0.6
CSTF3-204ENST00000524556 ERO1AQ96HE7 468 aa18.78■□□□□ 0.6
CSTF3-204ENST00000524556 USP2O75604 605 aaPredicted RBP18.77■□□□□ 0.6
CSTF3-204ENST00000524556 IREB2P48200 963 aaKnown RBP18.77■□□□□ 0.6
CSTF3-204ENST00000524556 FKBP5Q13451 457 aaPredicted RBP18.77■□□□□ 0.6
CSTF3-204ENST00000524556 OTUD7BQ6GQQ9 843 aa18.77■□□□□ 0.6
CSTF3-204ENST00000524556 ZNF804AQ7Z570 1209 aa18.77■□□□□ 0.6
CSTF3-204ENST00000524556 WWC1Q8IX03 1113 aa18.77■□□□□ 0.6
CSTF3-204ENST00000524556 VEZTQ9HBM0 779 aa18.77■□□□□ 0.6
CSTF3-204ENST00000524556 PTPN22Q9Y2R2 807 aa18.77■□□□□ 0.6
CSTF3-204ENST00000524556 AOX1Q06278 1338 aa18.76■□□□□ 0.59
CSTF3-204ENST00000524556 GJA5P36382 358 aa18.76■□□□□ 0.59
CSTF3-204ENST00000524556 FOXO4P98177 505 aa18.76■□□□□ 0.59
CSTF3-204ENST00000524556 CRHR2Q13324 411 aa18.76■□□□□ 0.59
CSTF3-204ENST00000524556 IFIT5Q13325 482 aaKnown RBP18.76■□□□□ 0.59
CSTF3-204ENST00000524556 TESPA1A2RU30 521 aaPredicted RBP18.75■□□□□ 0.59
CSTF3-204ENST00000524556 RASA3Q14644 834 aa18.75■□□□□ 0.59
CSTF3-204ENST00000524556 ANKRD13AQ8IZ07 590 aa18.75■□□□□ 0.59
CSTF3-204ENST00000524556 CD99L2Q8TCZ2 262 aa18.75■□□□□ 0.59
CSTF3-204ENST00000524556 PTPN18Q99952 460 aa18.75■□□□□ 0.59
CSTF3-204ENST00000524556 IL16Q14005 1332 aa18.74■□□□□ 0.59
CSTF3-204ENST00000524556 RBM5P52756 815 aaKnown RBP eCLIP18.74■□□□□ 0.59
CSTF3-204ENST00000524556 ARMC5Q96C12 935 aa18.74■□□□□ 0.59
CSTF3-204ENST00000524556 EFCC1Q9HA90 598 aa18.74■□□□□ 0.59
CSTF3-204ENST00000524556 JAG2Q9Y219 1238 aa18.74■□□□□ 0.59
CSTF3-204ENST00000524556 OTOFQ9HC10 1997 aa18.73■□□□□ 0.59
CSTF3-204ENST00000524556 SP3Q02447 781 aa18.73■□□□□ 0.59
CSTF3-204ENST00000524556 HABP4Q5JVS0 413 aaKnown RBP18.73■□□□□ 0.59
CSTF3-204ENST00000524556 CHMP3Q9Y3E7 222 aa18.73■□□□□ 0.59
CSTF3-204ENST00000524556 FAM205AQ6ZU69 1335 aa18.72■□□□□ 0.59
CSTF3-204ENST00000524556 EN2P19622 333 aaPredicted RBP18.71■□□□□ 0.59
CSTF3-204ENST00000524556 CAP1Q01518 475 aa18.71■□□□□ 0.59
CSTF3-204ENST00000524556 TNFAIP1Q13829 316 aa18.71■□□□□ 0.59
CSTF3-204ENST00000524556 SPDYE2Q495Y8 402 aa18.71■□□□□ 0.59
CSTF3-204ENST00000524556 LMBR1LQ6UX01 489 aa18.71■□□□□ 0.59
CSTF3-204ENST00000524556 OPTNQ96CV9 577 aa18.71■□□□□ 0.59
CSTF3-204ENST00000524556 ZNF594Q96JF6 807 aaPredicted RBP18.71■□□□□ 0.59
CSTF3-204ENST00000524556 ELP3Q9H9T3 547 aa18.71■□□□□ 0.59
CSTF3-204ENST00000524556 ZNF70Q9UC06 446 aaPredicted RBP18.71■□□□□ 0.59
CSTF3-204ENST00000524556 PLIN1O60240 522 aa18.7■□□□□ 0.58
CSTF3-204ENST00000524556 VAMP4O75379 141 aa18.7■□□□□ 0.58
CSTF3-204ENST00000524556 CCDC57Q2TAC2 916 aa18.7■□□□□ 0.58
CSTF3-204ENST00000524556 EPHA10Q5JZY3 1008 aa18.7■□□□□ 0.58
CSTF3-204ENST00000524556 BEND3Q5T5X7 828 aa18.7■□□□□ 0.58
CSTF3-204ENST00000524556 LDHAL6AQ6ZMR3 332 aa18.7■□□□□ 0.58
CSTF3-204ENST00000524556 MS4A4AQ96JQ5 239 aa18.7■□□□□ 0.58
CSTF3-204ENST00000524556 SERPINA10Q9UK55 444 aa18.7■□□□□ 0.58
CSTF3-204ENST00000524556 CCDC184Q52MB2 194 aa18.69■□□□□ 0.58
CSTF3-204ENST00000524556 NCBP3Q53F19 620 aaKnown RBP18.69■□□□□ 0.58
CSTF3-204ENST00000524556 TAF7LQ5H9L4 462 aa18.69■□□□□ 0.58
CSTF3-204ENST00000524556 TDRD7Q8NHU6 1098 aaKnown RBP18.69■□□□□ 0.58
CSTF3-204ENST00000524556 TEPSINQ96N21 525 aa18.69■□□□□ 0.58
CSTF3-204ENST00000524556 TDRD3Q9H7E2 651 aaKnown RBP18.69■□□□□ 0.58
CSTF3-204ENST00000524556 CNNM1Q9NRU3 951 aa18.69■□□□□ 0.58
CSTF3-204ENST00000524556 TTF2Q9UNY4 1162 aaKnown RBP18.69■□□□□ 0.58
CSTF3-204ENST00000524556 FANCIQ9NVI1 1328 aa18.69■□□□□ 0.58
CSTF3-204ENST00000524556 F6X3S4 739 aa18.68■□□□□ 0.58
CSTF3-204ENST00000524556 MFSD14BQ5SR56 506 aa18.68■□□□□ 0.58
CSTF3-204ENST00000524556 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.68■□□□□ 0.58
CSTF3-204ENST00000524556 ARAP2Q8WZ64 1704 aa18.67■□□□□ 0.58
CSTF3-204ENST00000524556 HIBADHP31937 336 aaKnown RBP18.67■□□□□ 0.58
CSTF3-204ENST00000524556 UBE4AQ14139 1066 aa18.67■□□□□ 0.58
CSTF3-204ENST00000524556 ARHGEF6Q15052 776 aa18.67■□□□□ 0.58
CSTF3-204ENST00000524556 CDAN1Q8IWY9 1227 aa18.67■□□□□ 0.58
CSTF3-204ENST00000524556 DZIP1LQ8IYY4 767 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms