RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-215	ENST00000524111	CCDC102B	Q68D86	513 aa		10.16	□□□□□ -0.78
SREK1-215	ENST00000524111	CLEC17A	Q6ZS10	378 aa		10.16	□□□□□ -0.78
SREK1-215	ENST00000524111	UTP14A	Q9BVJ6	771 aa	Known RBP	10.16	□□□□□ -0.78
SREK1-215	ENST00000524111	SLC12A7	Q9Y666	1083 aa		10.16	□□□□□ -0.78
SREK1-215	ENST00000524111	PCCA	P05165	728 aa	Predicted RBP	10.16	□□□□□ -0.78
SREK1-215	ENST00000524111	RABL6	Q3YEC7	729 aa	Predicted RBP	10.16	□□□□□ -0.78
SREK1-215	ENST00000524111	TTLL11	Q8NHH1	800 aa		10.16	□□□□□ -0.78
SREK1-215	ENST00000524111	TSC1	Q92574	1164 aa		10.16	□□□□□ -0.78
SREK1-215	ENST00000524111	ALG1	Q9BT22	464 aa		10.16	□□□□□ -0.78
SREK1-215	ENST00000524111	WWC3	Q9ULE0	1092 aa		10.16	□□□□□ -0.78
SREK1-215	ENST00000524111	MST1R	Q04912	1400 aa		10.15	□□□□□ -0.78
SREK1-215	ENST00000524111	ZFY	P08048	801 aa	Predicted RBP	10.15	□□□□□ -0.78
SREK1-215	ENST00000524111	DDX19A	Q9NUU7	478 aa	Known RBP	10.15	□□□□□ -0.78
SREK1-215	ENST00000524111	DENND2A	Q9ULE3	1009 aa		10.15	□□□□□ -0.78
SREK1-215	ENST00000524111	PDE8A	O60658	829 aa		10.15	□□□□□ -0.78
SREK1-215	ENST00000524111	CCDC186	Q7Z3E2	898 aa		10.15	□□□□□ -0.78
SREK1-215	ENST00000524111	PXDNL	A1KZ92	1463 aa		10.15	□□□□□ -0.78
SREK1-215	ENST00000524111	PTGS1	P23219	599 aa		10.15	□□□□□ -0.79
SREK1-215	ENST00000524111	IARS	P41252	1262 aa	Known RBP	10.15	□□□□□ -0.79
SREK1-215	ENST00000524111	MCAM	P43121	646 aa		10.15	□□□□□ -0.79
SREK1-215	ENST00000524111	SPECC1	Q5M775	1068 aa		10.15	□□□□□ -0.79
SREK1-215	ENST00000524111	PPP1R9B	Q96SB3	815 aa		10.15	□□□□□ -0.79
SREK1-215	ENST00000524111	USP42	Q9H9J4	1324 aa	Known RBP	10.15	□□□□□ -0.79
SREK1-215	ENST00000524111	PES1	O00541	588 aa	Known RBP	10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	ZBTB43	O43298	467 aa		10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	EPB41L2	O43491	1005 aa	Known RBP	10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	KCNQ2	O43526	872 aa		10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	PDIA3	P30101	505 aa	Known RBP	10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	GYG1	P46976	350 aa		10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	ST3GAL1	Q11201	340 aa		10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	CCDC152	Q4G0S7	254 aa		10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	GLIPR1L2	Q4G1C9	344 aa		10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	FAM200A	Q8TCP9	573 aa		10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	C16orf45	Q96MC5	204 aa	Predicted RBP	10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	LMTK3	Q96Q04	1460 aa		10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	PRKAB2	O43741	272 aa		10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	MFSD6	Q6ZSS7	791 aa		10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	TRIM22	Q8IYM9	498 aa		10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	GNL3L	Q9NVN8	582 aa	Known RBP	10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	TRMT1	Q9NXH9	659 aa	Known RBP	10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	TFCP2L1	Q9NZI6	479 aa		10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	PDE6A	P16499	860 aa		10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	CRKL	P46109	303 aa	Known RBP	10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	NSUN7	Q8NE18	718 aa	Known RBP	10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	PIH1D3	Q9NQM4	214 aa	Known RBP	10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	CCDC87	Q9NVE4	849 aa		10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	NWD1	Q149M9	1564 aa		10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	VIRMA	Q69YN4	1812 aa	Known RBP	10.14	□□□□□ -0.79
SREK1-215	ENST00000524111	SDR42E1	Q8WUS8	393 aa		10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	DSCC1	Q9BVC3	393 aa		10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	UTY	O14607	1347 aa		10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	LOC102724428	A0A0B4J2F2	783 aa		10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	ZPR1	O75312	459 aa		10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	PDE8B	O95263	885 aa		10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	SIK1	P57059	783 aa		10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	TPM4	P67936	248 aa		10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	TTF1	Q15361	905 aa	Predicted RBP	10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	TPD52L1	Q16890	204 aa	Predicted RBP	10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	CEP57L1	Q8IYX8	460 aa		10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	ANKIB1	Q9P2G1	1089 aa		10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	CLIP2	Q9UDT6	1046 aa		10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	NFAT5	O94916	1531 aa		10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	CDK11B	P21127	795 aa	Known RBP	10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	PUM3	Q15397	648 aa	Known RBP	10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	SUSD4	Q5VX71	490 aa		10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	ZNF652	Q9Y2D9	606 aa		10.13	□□□□□ -0.79
SREK1-215	ENST00000524111	NRDC	O43847	1150 aa		10.12	□□□□□ -0.79
SREK1-215	ENST00000524111	CAVIN4	Q5BKX8	364 aa		10.12	□□□□□ -0.79
SREK1-215	ENST00000524111	AOPEP	Q8N6M6	819 aa		10.12	□□□□□ -0.79
SREK1-215	ENST00000524111	CBX8	Q9HC52	389 aa		10.12	□□□□□ -0.79
SREK1-215	ENST00000524111	UQCRFS1P1	P0C7P4	283 aa		10.12	□□□□□ -0.79
SREK1-215	ENST00000524111	ANKRD18A	Q8IVF6	992 aa		10.12	□□□□□ -0.79
SREK1-215	ENST00000524111	SPATA5	Q8NB90	893 aa		10.12	□□□□□ -0.79
SREK1-215	ENST00000524111	ISCA1	Q9BUE6	129 aa		10.12	□□□□□ -0.79
SREK1-215	ENST00000524111	NOL7	Q9UMY1	257 aa	Known RBP	10.12	□□□□□ -0.79
SREK1-215	ENST00000524111	UBAP1L	F5GYI3	381 aa		10.12	□□□□□ -0.79
SREK1-215	ENST00000524111	PFKFB2	O60825	505 aa		10.12	□□□□□ -0.79
SREK1-215	ENST00000524111	FAM177A1	Q8N128	213 aa	Predicted RBP	10.12	□□□□□ -0.79
SREK1-215	ENST00000524111	CDC5L	Q99459	802 aa	Known RBP	10.12	□□□□□ -0.79
SREK1-215	ENST00000524111		G3V3G9	751 aa		10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	GNPAT	O15228	680 aa		10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	SPTLC2	O15270	562 aa		10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	CYP19A1	P11511	503 aa	Predicted RBP	10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	LRMP	Q12912	555 aa		10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	DCAF8	Q5TAQ9	597 aa		10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	KLHL10	Q6JEL2	608 aa		10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	KCNJ14	Q9UNX9	436 aa		10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	MED23	Q9ULK4	1368 aa		10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	CDKL5	O76039	1030 aa		10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	SLC3A2	P08195	630 aa	Known RBP	10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	CASP7	P55210	303 aa		10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	LPIN2	Q92539	896 aa		10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	MRPS27	Q92552	414 aa	Known RBP	10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	PGBD1	Q96JS3	809 aa		10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	NAT10	Q9H0A0	1025 aa	Known RBP	10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	ANGEL1	Q9UNK9	670 aa	Known RBP	10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	LMOD1	P29536	600 aa	Predicted RBP	10.11	□□□□□ -0.79
SREK1-215	ENST00000524111	RASGRF1	Q13972	1273 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms