RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 RBM19Q9Y4C8 960 aaKnown RBP11.27□□□□□ -0.6
SDCBP-212ENST00000523483 MAP3K12Q12852 859 aa11.27□□□□□ -0.61
SDCBP-212ENST00000523483 FBXO33Q7Z6M2 555 aa11.27□□□□□ -0.61
SDCBP-212ENST00000523483 RUFY2Q8WXA3 655 aa11.27□□□□□ -0.61
SDCBP-212ENST00000523483 ESYT1Q9BSJ8 1104 aa11.27□□□□□ -0.61
SDCBP-212ENST00000523483 MXD3Q9BW11 206 aa11.27□□□□□ -0.61
SDCBP-212ENST00000523483 COL11A2P13942 1736 aaPredicted RBP11.27□□□□□ -0.61
SDCBP-212ENST00000523483 PRDX5P30044 214 aa11.27□□□□□ -0.61
SDCBP-212ENST00000523483 LRP5O75197 1615 aa11.27□□□□□ -0.61
SDCBP-212ENST00000523483 APPP05067 770 aa11.26□□□□□ -0.61
SDCBP-212ENST00000523483 TTF1Q15361 905 aaPredicted RBP11.26□□□□□ -0.61
SDCBP-212ENST00000523483 DZIP1Q86YF9 867 aaKnown RBP11.26□□□□□ -0.61
SDCBP-212ENST00000523483 KCNQ5Q9NR82 932 aa11.26□□□□□ -0.61
SDCBP-212ENST00000523483 PODXL2Q9NZ53 605 aa11.26□□□□□ -0.61
SDCBP-212ENST00000523483 SLX4Q8IY92 1834 aa11.26□□□□□ -0.61
SDCBP-212ENST00000523483 REC8O95072 547 aa11.26□□□□□ -0.61
SDCBP-212ENST00000523483 MFSD14BQ5SR56 506 aa11.26□□□□□ -0.61
SDCBP-212ENST00000523483 CASZ1Q86V15 1759 aa11.26□□□□□ -0.61
SDCBP-212ENST00000523483 ARHGAP27Q6ZUM4 889 aa11.26□□□□□ -0.61
SDCBP-212ENST00000523483 ZNF532Q9HCE3 1301 aa11.25□□□□□ -0.61
SDCBP-212ENST00000523483 RNF113AO15541 343 aaKnown RBP11.25□□□□□ -0.61
SDCBP-212ENST00000523483 LRRFIP1Q32MZ4 808 aaKnown RBP11.25□□□□□ -0.61
SDCBP-212ENST00000523483 TTLL5Q6EMB2 1281 aa11.25□□□□□ -0.61
SDCBP-212ENST00000523483 ZNF589Q86UQ0 364 aaPredicted RBP11.25□□□□□ -0.61
SDCBP-212ENST00000523483 SYT17Q9BSW7 474 aa11.25□□□□□ -0.61
SDCBP-212ENST00000523483 QSER1Q2KHR3 1735 aa11.25□□□□□ -0.61
SDCBP-212ENST00000523483 NRXN2Q9P2S2 1712 aa11.25□□□□□ -0.61
SDCBP-212ENST00000523483 HIP1O00291 1037 aa11.25□□□□□ -0.61
SDCBP-212ENST00000523483 CYP7A1P22680 504 aa11.25□□□□□ -0.61
SDCBP-212ENST00000523483 ERICH6Q7L0X2 663 aa11.25□□□□□ -0.61
SDCBP-212ENST00000523483 RTKN2Q8IZC4 609 aa11.25□□□□□ -0.61
SDCBP-212ENST00000523483 C22orf23Q9BZE7 217 aa11.25□□□□□ -0.61
SDCBP-212ENST00000523483 TAOK3Q9H2K8 898 aa11.25□□□□□ -0.61
SDCBP-212ENST00000523483 RAD17O75943 681 aa11.25□□□□□ -0.61
SDCBP-212ENST00000523483 PDE6AP16499 860 aa11.25□□□□□ -0.61
SDCBP-212ENST00000523483 RASSF7Q02833 373 aa11.25□□□□□ -0.61
SDCBP-212ENST00000523483 C7orf43Q8WVR3 580 aa11.25□□□□□ -0.61
SDCBP-212ENST00000523483 ECE2O60344 883 aa11.24□□□□□ -0.61
SDCBP-212ENST00000523483 DIXDC1Q155Q3 683 aa11.24□□□□□ -0.61
SDCBP-212ENST00000523483 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.24□□□□□ -0.61
SDCBP-212ENST00000523483 AIDAQ96BJ3 306 aa11.24□□□□□ -0.61
SDCBP-212ENST00000523483 LDHBP07195 334 aaKnown RBP11.24□□□□□ -0.61
SDCBP-212ENST00000523483 CC2D2BQ6DHV5 1058 aa11.24□□□□□ -0.61
SDCBP-212ENST00000523483 NAA16Q6N069 864 aaPredicted RBP11.24□□□□□ -0.61
SDCBP-212ENST00000523483 STK11IPQ8N1F8 1099 aa11.24□□□□□ -0.61
SDCBP-212ENST00000523483 PUS7LQ9H0K6 701 aaKnown RBP11.24□□□□□ -0.61
SDCBP-212ENST00000523483 SGSM2O43147 1006 aa11.23□□□□□ -0.61
SDCBP-212ENST00000523483 SLC4A8Q2Y0W8 1093 aa11.23□□□□□ -0.61
SDCBP-212ENST00000523483 ZSCAN25Q6NSZ9 544 aa11.23□□□□□ -0.61
SDCBP-212ENST00000523483 KIAA0825Q8IV33 1275 aa11.23□□□□□ -0.61
SDCBP-212ENST00000523483 TDRD7Q8NHU6 1098 aaKnown RBP11.23□□□□□ -0.61
SDCBP-212ENST00000523483 OSBP2Q969R2 916 aa11.23□□□□□ -0.61
SDCBP-212ENST00000523483 COA1Q9GZY4 146 aa11.23□□□□□ -0.61
SDCBP-212ENST00000523483 MED23Q9ULK4 1368 aa11.23□□□□□ -0.61
SDCBP-212ENST00000523483 SOCS7O14512 581 aa11.23□□□□□ -0.61
SDCBP-212ENST00000523483 RBM5P52756 815 aaKnown RBP eCLIP11.23□□□□□ -0.61
SDCBP-212ENST00000523483 GRIK5Q16478 980 aa11.23□□□□□ -0.61
SDCBP-212ENST00000523483 MCMDC2Q4G0Z9 681 aa11.23□□□□□ -0.61
SDCBP-212ENST00000523483 SUPT20HQ8NEM7 779 aa11.23□□□□□ -0.61
SDCBP-212ENST00000523483 JDP2Q8WYK2 163 aa11.23□□□□□ -0.61
SDCBP-212ENST00000523483 ZNF512BQ96KM6 892 aaPredicted RBP11.23□□□□□ -0.61
SDCBP-212ENST00000523483 SCNN1DP51172 638 aa11.23□□□□□ -0.61
SDCBP-212ENST00000523483 WDR66Q8TBY9 1149 aa11.23□□□□□ -0.61
SDCBP-212ENST00000523483 COL1A1P02452 1464 aaPredicted RBP11.22□□□□□ -0.61
SDCBP-212ENST00000523483 M0R2C6 588 aa11.22□□□□□ -0.61
SDCBP-212ENST00000523483 ANP32AP39687 249 aaKnown RBP11.22□□□□□ -0.61
SDCBP-212ENST00000523483 GPR162Q16538 588 aa11.22□□□□□ -0.61
SDCBP-212ENST00000523483 VPS53Q5VIR6 699 aa11.22□□□□□ -0.61
SDCBP-212ENST00000523483 ARMT1Q9H993 441 aa11.22□□□□□ -0.61
SDCBP-212ENST00000523483 MBD4O95243 580 aa11.22□□□□□ -0.61
SDCBP-212ENST00000523483 MECOMQ03112 1051 aa11.22□□□□□ -0.61
SDCBP-212ENST00000523483 PTH1RQ03431 593 aa11.22□□□□□ -0.61
SDCBP-212ENST00000523483 SOGA3Q5TF21 947 aa11.22□□□□□ -0.61
SDCBP-212ENST00000523483 NIM1KQ8IY84 436 aa11.22□□□□□ -0.61
SDCBP-212ENST00000523483 AATFQ9NY61 560 aaKnown RBP eCLIP11.22□□□□□ -0.61
SDCBP-212ENST00000523483 MAST3O60307 1309 aa11.22□□□□□ -0.61
SDCBP-212ENST00000523483 SEMA3EO15041 775 aa11.22□□□□□ -0.61
SDCBP-212ENST00000523483 GPAA1O43292 621 aa11.22□□□□□ -0.61
SDCBP-212ENST00000523483 ADD2P35612 726 aa11.22□□□□□ -0.61
SDCBP-212ENST00000523483 APPBP2Q92624 585 aa11.22□□□□□ -0.61
SDCBP-212ENST00000523483 ZFYP08048 801 aaPredicted RBP11.21□□□□□ -0.61
SDCBP-212ENST00000523483 KIAA2012Q0VF49 1180 aa11.21□□□□□ -0.61
SDCBP-212ENST00000523483 TTF2Q9UNY4 1162 aaKnown RBP11.21□□□□□ -0.62
SDCBP-212ENST00000523483 MCCP23508 829 aa11.21□□□□□ -0.62
SDCBP-212ENST00000523483 IARSP41252 1262 aaKnown RBP11.21□□□□□ -0.62
SDCBP-212ENST00000523483 HAND2P61296 217 aa11.21□□□□□ -0.62
SDCBP-212ENST00000523483 ZMYM1Q5SVZ6 1142 aa11.21□□□□□ -0.62
SDCBP-212ENST00000523483 PODNQ7Z5L7 613 aa11.21□□□□□ -0.62
SDCBP-212ENST00000523483 ADGRA1Q86SQ6 560 aa11.21□□□□□ -0.62
SDCBP-212ENST00000523483 ZGPATQ8N5A5 531 aaKnown RBP11.21□□□□□ -0.62
SDCBP-212ENST00000523483 ZBTB12Q9Y330 459 aaPredicted RBP11.21□□□□□ -0.62
SDCBP-212ENST00000523483 GJA3Q9Y6H8 435 aa11.21□□□□□ -0.62
SDCBP-212ENST00000523483 CCDC171Q6TFL3 1326 aa11.21□□□□□ -0.62
SDCBP-212ENST00000523483 NFKBIEO00221 500 aa11.2□□□□□ -0.62
SDCBP-212ENST00000523483 IL1R1P14778 569 aa11.2□□□□□ -0.62
SDCBP-212ENST00000523483 DYNLL1P63167 89 aaKnown RBP11.2□□□□□ -0.62
SDCBP-212ENST00000523483 SPTY2D1Q68D10 685 aaPredicted RBP11.2□□□□□ -0.62
SDCBP-212ENST00000523483 AK9Q5TCS8 1911 aa11.2□□□□□ -0.62
SDCBP-212ENST00000523483 NOL8Q76FK4 1167 aaKnown RBP11.2□□□□□ -0.62
SDCBP-212ENST00000523483 NOL10Q9BSC4 688 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms