RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 SRGAP3O43295 1099 aa22.58■■□□□ 1.21
VEGFA-222ENST00000520948 CHRNDQ07001 517 aa22.58■■□□□ 1.21
VEGFA-222ENST00000520948 TAF7LQ5H9L4 462 aa22.58■■□□□ 1.21
VEGFA-222ENST00000520948 RSBN1LQ6PCB5 846 aaPredicted RBP22.58■■□□□ 1.21
VEGFA-222ENST00000520948 A0A1B0GUL6 1792 aa22.58■■□□□ 1.2
VEGFA-222ENST00000520948 WTIPA6NIX2 430 aaPredicted RBP22.57■■□□□ 1.2
VEGFA-222ENST00000520948 ZNF157P51786 506 aaPredicted RBP22.57■■□□□ 1.2
VEGFA-222ENST00000520948 LRRC24Q50LG9 513 aa22.57■■□□□ 1.2
VEGFA-222ENST00000520948 CEP85Q6P2H3 762 aa22.57■■□□□ 1.2
VEGFA-222ENST00000520948 CDCA5Q96FF9 252 aa22.57■■□□□ 1.2
VEGFA-222ENST00000520948 CRBNQ96SW2 442 aa22.57■■□□□ 1.2
VEGFA-222ENST00000520948 FBXO3Q9UK99 471 aa22.57■■□□□ 1.2
VEGFA-222ENST00000520948 KIF23Q02241 960 aaPredicted RBP22.56■■□□□ 1.2
VEGFA-222ENST00000520948 DGKZQ13574 1117 aa22.56■■□□□ 1.2
VEGFA-222ENST00000520948 SCARF1Q14162 830 aa22.56■■□□□ 1.2
VEGFA-222ENST00000520948 ANGEL2Q5VTE6 544 aaKnown RBP22.56■■□□□ 1.2
VEGFA-222ENST00000520948 ATG9AQ7Z3C6 839 aa22.56■■□□□ 1.2
VEGFA-222ENST00000520948 RPAP2Q8IXW5 612 aaPredicted RBP22.56■■□□□ 1.2
VEGFA-222ENST00000520948 ANKRD2Q9GZV1 360 aa22.56■■□□□ 1.2
VEGFA-222ENST00000520948 CNNM1Q9NRU3 951 aa22.56■■□□□ 1.2
VEGFA-222ENST00000520948 ZNF609O15014 1411 aa22.56■■□□□ 1.2
VEGFA-222ENST00000520948 EYA2O00167 538 aa22.55■■□□□ 1.2
VEGFA-222ENST00000520948 ZNF280AP59817 542 aaPredicted RBP22.55■■□□□ 1.2
VEGFA-222ENST00000520948 AGBL3Q8NEM8 1001 aa22.55■■□□□ 1.2
VEGFA-222ENST00000520948 PA2G4Q9UQ80 394 aaKnown RBP22.55■■□□□ 1.2
VEGFA-222ENST00000520948 AKAP11Q9UKA4 1901 aa22.55■■□□□ 1.2
VEGFA-222ENST00000520948 ZNF646O15015 1829 aaPredicted RBP22.54■■□□□ 1.2
VEGFA-222ENST00000520948 CIAO1O76071 339 aa22.54■■□□□ 1.2
VEGFA-222ENST00000520948 ATP2B4P23634 1241 aa22.54■■□□□ 1.2
VEGFA-222ENST00000520948 SIRT2Q8IXJ6 389 aa22.54■■□□□ 1.2
VEGFA-222ENST00000520948 CCDC102AQ96A19 550 aa22.54■■□□□ 1.2
VEGFA-222ENST00000520948 SCAF8Q9UPN6 1271 aaKnown RBP22.54■■□□□ 1.2
VEGFA-222ENST00000520948 LEMD3Q9Y2U8 911 aa22.54■■□□□ 1.2
VEGFA-222ENST00000520948 USP17L8P0C7I0 530 aa22.53■■□□□ 1.2
VEGFA-222ENST00000520948 HELBQ8NG08 1087 aaPredicted RBP22.53■■□□□ 1.2
VEGFA-222ENST00000520948 GMLQ99445 158 aa22.53■■□□□ 1.2
VEGFA-222ENST00000520948 MYOZ2Q9NPC6 264 aa22.53■■□□□ 1.2
VEGFA-222ENST00000520948 MROH5Q6ZUA9 1318 aa22.53■■□□□ 1.2
VEGFA-222ENST00000520948 USP17L3A6NCW0 530 aa22.52■■□□□ 1.2
VEGFA-222ENST00000520948 USP17L4A6NCW7 530 aa22.52■■□□□ 1.2
VEGFA-222ENST00000520948 TAF5LO75529 589 aa22.52■■□□□ 1.2
VEGFA-222ENST00000520948 SLC10A3P09131 477 aa22.52■■□□□ 1.2
VEGFA-222ENST00000520948 MLLT1Q03111 559 aaPredicted RBP22.52■■□□□ 1.2
VEGFA-222ENST00000520948 USP17L1Q7RTZ2 530 aa22.52■■□□□ 1.2
VEGFA-222ENST00000520948 VGLL2Q8N8G2 317 aa22.52■■□□□ 1.2
VEGFA-222ENST00000520948 PAPPA2Q9BXP8 1791 aa22.51■■□□□ 1.19
VEGFA-222ENST00000520948 PODNQ7Z5L7 613 aa22.51■■□□□ 1.19
VEGFA-222ENST00000520948 FBXW7Q969H0 707 aa22.51■■□□□ 1.19
VEGFA-222ENST00000520948 MXD3Q9BW11 206 aa22.51■■□□□ 1.19
VEGFA-222ENST00000520948 NOP58Q9Y2X3 529 aaKnown RBP22.51■■□□□ 1.19
VEGFA-222ENST00000520948 IRS2Q9Y4H2 1338 aa22.51■■□□□ 1.19
VEGFA-222ENST00000520948 MED23Q9ULK4 1368 aa22.5■■□□□ 1.19
VEGFA-222ENST00000520948 SNAP23O00161 211 aa22.5■■□□□ 1.19
VEGFA-222ENST00000520948 TRPA1O75762 1119 aa22.5■■□□□ 1.19
VEGFA-222ENST00000520948 SIL1Q9H173 461 aa22.5■■□□□ 1.19
VEGFA-222ENST00000520948 ZNF804BA4D1E1 1349 aa22.5■■□□□ 1.19
VEGFA-222ENST00000520948 PDE8BO95263 885 aa22.49■■□□□ 1.19
VEGFA-222ENST00000520948 IL15P40933 162 aaPredicted RBP22.49■■□□□ 1.19
VEGFA-222ENST00000520948 AAMPQ13685 434 aa22.49■■□□□ 1.19
VEGFA-222ENST00000520948 C15orf52Q6ZUT6 534 aaKnown RBP22.49■■□□□ 1.19
VEGFA-222ENST00000520948 RNF186Q9NXI6 227 aa22.49■■□□□ 1.19
VEGFA-222ENST00000520948 SAGE1Q9NXZ1 904 aa22.49■■□□□ 1.19
VEGFA-222ENST00000520948 UBE4AQ14139 1066 aa22.48■■□□□ 1.19
VEGFA-222ENST00000520948 METTL24Q5JXM2 366 aa22.48■■□□□ 1.19
VEGFA-222ENST00000520948 MOB2Q70IA6 237 aa22.48■■□□□ 1.19
VEGFA-222ENST00000520948 RASAL3Q86YV0 1011 aa22.48■■□□□ 1.19
VEGFA-222ENST00000520948 EXOC6Q8TAG9 804 aa22.48■■□□□ 1.19
VEGFA-222ENST00000520948 CSRNP1Q96S65 589 aa22.48■■□□□ 1.19
VEGFA-222ENST00000520948 PCDHB15Q9Y5E8 787 aa22.48■■□□□ 1.19
VEGFA-222ENST00000520948 RGS19P49795 217 aa22.47■■□□□ 1.19
VEGFA-222ENST00000520948 NBPF9Q3BBW0 867 aa22.47■■□□□ 1.19
VEGFA-222ENST00000520948 DACT2Q5SW24 774 aa22.47■■□□□ 1.19
VEGFA-222ENST00000520948 PRAMEF18Q5VWM3 479 aa22.47■■□□□ 1.19
VEGFA-222ENST00000520948 TXNRD3Q86VQ6 643 aa22.47■■□□□ 1.19
VEGFA-222ENST00000520948 PITPNM2Q9BZ72 1349 aa22.47■■□□□ 1.19
VEGFA-222ENST00000520948 SASH1O94885 1247 aa22.46■■□□□ 1.19
VEGFA-222ENST00000520948 FGFR2P21802 821 aa22.46■■□□□ 1.19
VEGFA-222ENST00000520948 SURF6O75683 361 aaKnown RBP22.45■■□□□ 1.18
VEGFA-222ENST00000520948 KLRK1P26718 216 aa22.45■■□□□ 1.18
VEGFA-222ENST00000520948 G3BP1Q13283 466 aaKnown RBP eCLIP22.45■■□□□ 1.18
VEGFA-222ENST00000520948 CEP126Q9P2H0 1117 aa22.45■■□□□ 1.18
VEGFA-222ENST00000520948 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.45■■□□□ 1.18
VEGFA-222ENST00000520948 HMMRO75330 724 aa22.44■■□□□ 1.18
VEGFA-222ENST00000520948 CENPBP07199 599 aaPredicted RBP22.44■■□□□ 1.18
VEGFA-222ENST00000520948 UBE2Q2LH0YL09 131 aa22.43■■□□□ 1.18
VEGFA-222ENST00000520948 FKBP1BP68106 108 aa22.43■■□□□ 1.18
VEGFA-222ENST00000520948 OGFOD1Q8N543 542 aa22.43■■□□□ 1.18
VEGFA-222ENST00000520948 COA1Q9GZY4 146 aa22.43■■□□□ 1.18
VEGFA-222ENST00000520948 KCNJ4P48050 445 aa22.42■■□□□ 1.18
VEGFA-222ENST00000520948 IRX6P78412 446 aaPredicted RBP22.42■■□□□ 1.18
VEGFA-222ENST00000520948 TFCP2Q12800 502 aa22.42■■□□□ 1.18
VEGFA-222ENST00000520948 TTLL12Q14166 644 aaPredicted RBP22.42■■□□□ 1.18
VEGFA-222ENST00000520948 STRIP1Q5VSL9 837 aa22.42■■□□□ 1.18
VEGFA-222ENST00000520948 MYO3BQ8WXR4 1341 aa22.41■■□□□ 1.18
VEGFA-222ENST00000520948 WNT10BO00744 389 aa22.41■■□□□ 1.18
VEGFA-222ENST00000520948 PUM3Q15397 648 aaKnown RBP22.41■■□□□ 1.18
VEGFA-222ENST00000520948 KIAA0825Q8IV33 1275 aa22.4■■□□□ 1.18
VEGFA-222ENST00000520948 LPIN2Q92539 896 aa22.4■■□□□ 1.18
VEGFA-222ENST00000520948 FAM84BQ96KN1 310 aaPredicted RBP22.4■■□□□ 1.18
VEGFA-222ENST00000520948 EXOC6BQ9Y2D4 811 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms