RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 PTGS1P23219 599 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 USP8P40818 1118 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 PPP1R2P41236 205 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 SYKP43405 635 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 NT5C2P49902 561 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 CDR1P51861 262 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 KRT83P78385 493 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 AMPD3Q01432 767 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 FKBP4Q02790 459 aaKnown RBP eCLIP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 PTH1RQ03431 593 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 SPAG1Q07617 926 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 MAP3K12Q12852 859 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 IFIT5Q13325 482 aaKnown RBP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 PKP1Q13835 747 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 GCKRQ14397 625 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 KRT24Q2M2I5 525 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 SLFNL1Q499Z3 407 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 RILPL1Q5EBL4 403 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 USPL1Q5W0Q7 1092 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 CC2D2BQ6DHV5 1058 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZNF790Q6PG37 636 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 KIF6Q6ZMV9 814 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 MFSD6Q6ZSS7 791 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 COPS6Q7L5N1 327 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 HDXQ7Z353 690 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 KRT28Q7Z3Y7 464 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 LUZP1Q86V48 1076 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 PROSER2Q86WR7 435 aaPredicted RBP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 PLA2G4DQ86XP0 818 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 NUTM2AQ8IVF1 878 aaPredicted RBP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 AMOTL1Q8IY63 956 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCAR2Q8N163 923 aaKnown RBP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 KCTD17Q8N5Z5 321 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 GPR161Q8N6U8 529 aaKnown RBP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 NECAB1Q8N987 351 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 TRIML1Q8N9V2 468 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 KBTBD3Q8NAB2 608 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 MLKLQ8NB16 471 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 NFATC2IPQ8NCF5 419 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC191Q8NCU4 936 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 CNNM3Q8NE01 707 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 PLBD2Q8NHP8 589 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 TDRD7Q8NHU6 1098 aaKnown RBP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 TMC2Q8TDI7 906 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 BRF1Q92994 677 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 GTF3C6Q969F1 213 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 RNF25Q96BH1 459 aaPredicted RBP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 IQCDQ96DY2 449 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 DCAF5Q96JK2 942 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 TMEM87BQ96K49 555 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 C16orf45Q96MC5 204 aaPredicted RBP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 HAUS7Q99871 368 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 MTA3Q9BTC8 594 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 LRRC27Q9C0I9 530 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 SIL1Q9H173 461 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 DNAJC25Q9H1X3 360 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 TSPYL2Q9H2G4 693 aaPredicted RBP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 BICC1Q9H694 974 aaKnown RBP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 BCL2L12Q9HB09 334 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 LGR6Q9HBX8 967 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 ARFGAP3Q9NP61 516 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 LUC7LQ9NQ29 371 aaKnown RBP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 SNRKQ9NRH2 765 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 KCND1Q9NSA2 647 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 POLR3EQ9NVU0 708 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 PAG1Q9NWQ8 432 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 RMND1Q9NWS8 449 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 NLRP2Q9NX02 1062 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 CWC25Q9NXE8 425 aaPredicted RBP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 MAGEC2Q9UBF1 373 aaPredicted RBP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 PALD1Q9ULE6 856 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 USP16Q9Y5T5 823 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 MRVI1Q9Y6F6 885 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 CD163L1Q9NR16 1453 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 UTYO14607 1347 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 ERBB4Q15303 1308 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 WDR19Q8NEZ3 1342 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 SIGLEC1Q9BZZ2 1709 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 METP08581 1390 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 MYH6P13533 1939 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 MYH8P13535 1937 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 RFX7Q2KHR2 1363 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 MYH15Q9Y2K3 1946 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 RGPD8O14715 1765 aaPredicted RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 TECPR2O15040 1411 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 NCAPD2Q15021 1401 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 ANKARQ7Z5J8 1434 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 PTPRUQ92729 1446 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 AFDNP55196 1824 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 ANKRD18BA2A2Z9 1011 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 PTPDC1A2A3K4 754 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 NEURL1BA8MQ27 555 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 ERVV-2B6SEH9 535 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 E7EWF7 191 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 GOLIM4O00461 696 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZBTB43O43298 467 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 USO1O60763 962 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 NR1I2O75469 434 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZMYND10O75800 440 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 CIAO1O76071 339 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms