RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 GPR108Q9NPR9 543 aa17.86■□□□□ 0.45
SNF8-212ENST00000514089 COL4A5P29400 1685 aa17.86■□□□□ 0.45
SNF8-212ENST00000514089 LRRC37AA6NMS7 1700 aa17.85■□□□□ 0.45
SNF8-212ENST00000514089 IFIT2P09913 472 aaKnown RBP17.85■□□□□ 0.45
SNF8-212ENST00000514089 TTC39AQ5SRH9 613 aa17.85■□□□□ 0.45
SNF8-212ENST00000514089 USP50Q70EL3 339 aaPredicted RBP17.85■□□□□ 0.45
SNF8-212ENST00000514089 AACSQ86V21 672 aa17.85■□□□□ 0.45
SNF8-212ENST00000514089 KIAA0825Q8IV33 1275 aa17.85■□□□□ 0.45
SNF8-212ENST00000514089 TBC1D22AQ8WUA7 517 aa17.85■□□□□ 0.45
SNF8-212ENST00000514089 CCDC8Q9H0W5 538 aaPredicted RBP17.85■□□□□ 0.45
SNF8-212ENST00000514089 DENND2AQ9ULE3 1009 aa17.85■□□□□ 0.45
SNF8-212ENST00000514089 IRS2Q9Y4H2 1338 aa17.85■□□□□ 0.45
SNF8-212ENST00000514089 PHKA1P46020 1223 aa17.84■□□□□ 0.45
SNF8-212ENST00000514089 TBC1D10BQ4KMP7 808 aaPredicted RBP17.84■□□□□ 0.45
SNF8-212ENST00000514089 MFSD14BQ5SR56 506 aa17.84■□□□□ 0.45
SNF8-212ENST00000514089 WDR66Q8TBY9 1149 aa17.84■□□□□ 0.45
SNF8-212ENST00000514089 LRRCC1Q9C099 1032 aa17.84■□□□□ 0.45
SNF8-212ENST00000514089 RWDD1Q9H446 243 aaPredicted RBP17.84■□□□□ 0.45
SNF8-212ENST00000514089 CHD4Q14839 1912 aa17.84■□□□□ 0.45
SNF8-212ENST00000514089 UQCRFS1P1P0C7P4 283 aa17.83■□□□□ 0.44
SNF8-212ENST00000514089 RBM5P52756 815 aaKnown RBP eCLIP17.83■□□□□ 0.44
SNF8-212ENST00000514089 SAMD7Q7Z3H4 446 aa17.83■□□□□ 0.44
SNF8-212ENST00000514089 SMC1BQ8NDV3 1235 aa17.83■□□□□ 0.44
SNF8-212ENST00000514089 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.83■□□□□ 0.44
SNF8-212ENST00000514089 SEMA3EO15041 775 aa17.82■□□□□ 0.44
SNF8-212ENST00000514089 NEFLP07196 543 aa17.82■□□□□ 0.44
SNF8-212ENST00000514089 MMP14P50281 582 aa17.82■□□□□ 0.44
SNF8-212ENST00000514089 FKBP1AP62942 108 aaKnown RBP17.82■□□□□ 0.44
SNF8-212ENST00000514089 LDHDQ86WU2 507 aa17.82■□□□□ 0.44
SNF8-212ENST00000514089 DBNDD2Q9BQY9 259 aa17.82■□□□□ 0.44
SNF8-212ENST00000514089 DCTPP1Q9H773 170 aa17.82■□□□□ 0.44
SNF8-212ENST00000514089 FAM205AQ6ZU69 1335 aa17.81■□□□□ 0.44
SNF8-212ENST00000514089 SHTN1A0MZ66 631 aa17.81■□□□□ 0.44
SNF8-212ENST00000514089 RBM46Q8TBY0 533 aaKnown RBP17.81■□□□□ 0.44
SNF8-212ENST00000514089 EAF2Q96CJ1 260 aaPredicted RBP17.81■□□□□ 0.44
SNF8-212ENST00000514089 MYOZ2Q9NPC6 264 aa17.81■□□□□ 0.44
SNF8-212ENST00000514089 TTF2Q9UNY4 1162 aaKnown RBP17.81■□□□□ 0.44
SNF8-212ENST00000514089 DLGAP5Q15398 846 aa17.8■□□□□ 0.44
SNF8-212ENST00000514089 KIF4BQ2VIQ3 1234 aa17.8■□□□□ 0.44
SNF8-212ENST00000514089 CHADLQ6NUI6 762 aa17.8■□□□□ 0.44
SNF8-212ENST00000514089 ZGPATQ8N5A5 531 aaKnown RBP17.8■□□□□ 0.44
SNF8-212ENST00000514089 GMLQ99445 158 aa17.8■□□□□ 0.44
SNF8-212ENST00000514089 SMARCA5O60264 1052 aaPredicted RBP17.79■□□□□ 0.44
SNF8-212ENST00000514089 ZNF280AP59817 542 aaPredicted RBP17.79■□□□□ 0.44
SNF8-212ENST00000514089 FSTL1Q12841 308 aa17.79■□□□□ 0.44
SNF8-212ENST00000514089 SPTY2D1Q68D10 685 aaPredicted RBP17.79■□□□□ 0.44
SNF8-212ENST00000514089 DCPSQ96C86 337 aaKnown RBP17.79■□□□□ 0.44
SNF8-212ENST00000514089 ABCF2Q9UG63 623 aa17.79■□□□□ 0.44
SNF8-212ENST00000514089 SBF1O95248 1867 aa17.79■□□□□ 0.44
SNF8-212ENST00000514089 LDHBP07195 334 aaKnown RBP17.78■□□□□ 0.44
SNF8-212ENST00000514089 HDAC1Q13547 482 aaPredicted RBP17.78■□□□□ 0.44
SNF8-212ENST00000514089 SCARF1Q14162 830 aa17.78■□□□□ 0.44
SNF8-212ENST00000514089 ANKRD45Q5TZF3 282 aa17.78■□□□□ 0.44
SNF8-212ENST00000514089 CERS5Q8N5B7 392 aa17.78■□□□□ 0.44
SNF8-212ENST00000514089 SPATA5Q8NB90 893 aa17.78■□□□□ 0.44
SNF8-212ENST00000514089 TRPM4Q8TD43 1214 aa17.78■□□□□ 0.44
SNF8-212ENST00000514089 GCC1Q96CN9 775 aa17.78■□□□□ 0.44
SNF8-212ENST00000514089 DBNLQ9UJU6 430 aaKnown RBP17.78■□□□□ 0.44
SNF8-212ENST00000514089 SPEF2Q9C093 1822 aa17.77■□□□□ 0.44
SNF8-212ENST00000514089 MYO1BO43795 1136 aa17.77■□□□□ 0.44
SNF8-212ENST00000514089 POTEIP0CG38 1075 aa17.77■□□□□ 0.44
SNF8-212ENST00000514089 POTEJP0CG39 1038 aa17.77■□□□□ 0.44
SNF8-212ENST00000514089 C1QTNF8P60827 252 aa17.77■□□□□ 0.44
SNF8-212ENST00000514089 RASGRF1Q13972 1273 aa17.77■□□□□ 0.44
SNF8-212ENST00000514089 MAP1SQ66K74 1059 aaPredicted RBP17.77■□□□□ 0.44
SNF8-212ENST00000514089 CNTROBQ8N137 903 aa17.77■□□□□ 0.44
SNF8-212ENST00000514089 ZC3H15Q8WU90 426 aaKnown RBP17.77■□□□□ 0.44
SNF8-212ENST00000514089 GPATCH3Q96I76 525 aa17.77■□□□□ 0.44
SNF8-212ENST00000514089 SNRKQ9NRH2 765 aa17.77■□□□□ 0.44
SNF8-212ENST00000514089 TLR7Q9NYK1 1049 aaKnown RBP17.77■□□□□ 0.44
SNF8-212ENST00000514089 SUGT1Q9Y2Z0 365 aa17.77■□□□□ 0.44
SNF8-212ENST00000514089 LTBP1Q14766 1721 aa17.77■□□□□ 0.44
SNF8-212ENST00000514089 TIAM2Q8IVF5 1701 aa17.76■□□□□ 0.43
SNF8-212ENST00000514089 ZNF609O15014 1411 aa17.76■□□□□ 0.43
SNF8-212ENST00000514089 CFAP100Q494V2 611 aa17.76■□□□□ 0.43
SNF8-212ENST00000514089 DZIP1Q86YF9 867 aaKnown RBP17.76■□□□□ 0.43
SNF8-212ENST00000514089 HMG20BQ9P0W2 317 aa17.76■□□□□ 0.43
SNF8-212ENST00000514089 LRP2BPQ9P2M1 347 aa17.76■□□□□ 0.43
SNF8-212ENST00000514089 MAST3O60307 1309 aa17.75■□□□□ 0.43
SNF8-212ENST00000514089 ARID4AP29374 1257 aaPredicted RBP17.75■□□□□ 0.43
SNF8-212ENST00000514089 HIRAP54198 1017 aaPredicted RBP17.75■□□□□ 0.43
SNF8-212ENST00000514089 B4GALNT3Q6L9W6 998 aa17.75■□□□□ 0.43
SNF8-212ENST00000514089 ERICH6Q7L0X2 663 aa17.75■□□□□ 0.43
SNF8-212ENST00000514089 SLF2Q8IX21 1173 aa17.75■□□□□ 0.43
SNF8-212ENST00000514089 TEKT1Q969V4 418 aa17.75■□□□□ 0.43
SNF8-212ENST00000514089 RAI14Q9P0K7 980 aa17.75■□□□□ 0.43
SNF8-212ENST00000514089 EGFRP00533 1210 aa17.74■□□□□ 0.43
SNF8-212ENST00000514089 CDC37L1Q7L3B6 337 aa17.74■□□□□ 0.43
SNF8-212ENST00000514089 SULF1Q8IWU6 871 aa17.74■□□□□ 0.43
SNF8-212ENST00000514089 SERPINA10Q9UK55 444 aa17.74■□□□□ 0.43
SNF8-212ENST00000514089 MCAMP43121 646 aa17.73■□□□□ 0.43
SNF8-212ENST00000514089 CRKP46108 304 aa17.73■□□□□ 0.43
SNF8-212ENST00000514089 NBPF9Q3BBW0 867 aa17.73■□□□□ 0.43
SNF8-212ENST00000514089 ANGEL2Q5VTE6 544 aaKnown RBP17.73■□□□□ 0.43
SNF8-212ENST00000514089 TBC1D9Q6ZT07 1266 aa17.73■□□□□ 0.43
SNF8-212ENST00000514089 ZNF512BQ96KM6 892 aaPredicted RBP17.73■□□□□ 0.43
SNF8-212ENST00000514089 CCDC88AQ3V6T2 1871 aa17.72■□□□□ 0.43
SNF8-212ENST00000514089 WNT10BO00744 389 aa17.72■□□□□ 0.43
SNF8-212ENST00000514089 HDLBPQ00341 1268 aaKnown RBP17.72■□□□□ 0.43
SNF8-212ENST00000514089 GRIK5Q16478 980 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms