RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 HIP1O00291 1037 aa13.17□□□□□ -0.3
PFDN1-204ENST00000512707 GSPT1P15170 499 aaKnown RBP13.17□□□□□ -0.3
PFDN1-204ENST00000512707 SDSP20132 328 aa13.17□□□□□ -0.3
PFDN1-204ENST00000512707 TICAM2Q86XR7 235 aa13.17□□□□□ -0.3
PFDN1-204ENST00000512707 FSD1Q9BTV5 496 aa13.17□□□□□ -0.3
PFDN1-204ENST00000512707 TAOK3Q9H2K8 898 aa13.17□□□□□ -0.3
PFDN1-204ENST00000512707 PAG1Q9NWQ8 432 aa13.17□□□□□ -0.3
PFDN1-204ENST00000512707 WWC3Q9ULE0 1092 aa13.17□□□□□ -0.3
PFDN1-204ENST00000512707 GOLIM4O00461 696 aa13.16□□□□□ -0.3
PFDN1-204ENST00000512707 RIMBP2O15034 1052 aa13.16□□□□□ -0.3
PFDN1-204ENST00000512707 PPIP5K2O43314 1243 aa13.16□□□□□ -0.3
PFDN1-204ENST00000512707 CDC45O75419 566 aa13.16□□□□□ -0.3
PFDN1-204ENST00000512707 MAP4K4O95819 1239 aaPredicted RBP13.16□□□□□ -0.3
PFDN1-204ENST00000512707 KLRK1P26718 216 aa13.16□□□□□ -0.3
PFDN1-204ENST00000512707 RASGRF1Q13972 1273 aa13.16□□□□□ -0.3
PFDN1-204ENST00000512707 ZGPATQ8N5A5 531 aaKnown RBP13.16□□□□□ -0.3
PFDN1-204ENST00000512707 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.16□□□□□ -0.3
PFDN1-204ENST00000512707 DUOX1Q9NRD9 1551 aa13.15□□□□□ -0.3
PFDN1-204ENST00000512707 BRCA1P38398 1863 aaKnown RBP13.15□□□□□ -0.3
PFDN1-204ENST00000512707 WTIPA6NIX2 430 aaPredicted RBP13.15□□□□□ -0.3
PFDN1-204ENST00000512707 MCAMP43121 646 aa13.15□□□□□ -0.3
PFDN1-204ENST00000512707 KIAA2012Q0VF49 1180 aa13.15□□□□□ -0.3
PFDN1-204ENST00000512707 ZSCAN25Q6NSZ9 544 aa13.15□□□□□ -0.3
PFDN1-204ENST00000512707 SLC51AQ86UW1 340 aa13.15□□□□□ -0.3
PFDN1-204ENST00000512707 WDR66Q8TBY9 1149 aa13.15□□□□□ -0.3
PFDN1-204ENST00000512707 GPR101Q96P66 508 aaPredicted RBP13.15□□□□□ -0.3
PFDN1-204ENST00000512707 SNRKQ9NRH2 765 aa13.15□□□□□ -0.3
PFDN1-204ENST00000512707 DIAPH3Q9NSV4 1193 aa13.15□□□□□ -0.3
PFDN1-204ENST00000512707 HMG20BQ9P0W2 317 aa13.15□□□□□ -0.3
PFDN1-204ENST00000512707 LTBP3Q9NS15 1303 aa13.14□□□□□ -0.31
PFDN1-204ENST00000512707 IRS2Q9Y4H2 1338 aa13.14□□□□□ -0.31
PFDN1-204ENST00000512707 IGSF3O75054 1194 aa13.14□□□□□ -0.31
PFDN1-204ENST00000512707 IL1R1P14778 569 aa13.14□□□□□ -0.31
PFDN1-204ENST00000512707 ZAP70P43403 619 aa13.14□□□□□ -0.31
PFDN1-204ENST00000512707 CHAF1AQ13111 956 aaPredicted RBP13.14□□□□□ -0.31
PFDN1-204ENST00000512707 SPTY2D1Q68D10 685 aaPredicted RBP13.14□□□□□ -0.31
PFDN1-204ENST00000512707 PODNQ7Z5L7 613 aa13.14□□□□□ -0.31
PFDN1-204ENST00000512707 TXNRD3Q86VQ6 643 aa13.14□□□□□ -0.31
PFDN1-204ENST00000512707 LARGE2Q8N3Y3 721 aa13.14□□□□□ -0.31
PFDN1-204ENST00000512707 KBTBD3Q8NAB2 608 aa13.14□□□□□ -0.31
PFDN1-204ENST00000512707 TDRD7Q8NHU6 1098 aaKnown RBP13.14□□□□□ -0.31
PFDN1-204ENST00000512707 RUFY2Q8WXA3 655 aa13.14□□□□□ -0.31
PFDN1-204ENST00000512707 GPBP1L1Q9HC44 474 aaPredicted RBP13.14□□□□□ -0.31
PFDN1-204ENST00000512707 CD209Q9NNX6 404 aa13.14□□□□□ -0.31
PFDN1-204ENST00000512707 IQSEC3Q9UPP2 1182 aaPredicted RBP13.14□□□□□ -0.31
PFDN1-204ENST00000512707 RFX7Q2KHR2 1363 aa13.14□□□□□ -0.31
PFDN1-204ENST00000512707 SNED1Q8TER0 1413 aa13.13□□□□□ -0.31
PFDN1-204ENST00000512707 ZFYP08048 801 aaPredicted RBP13.13□□□□□ -0.31
PFDN1-204ENST00000512707 MAP3K12Q12852 859 aa13.13□□□□□ -0.31
PFDN1-204ENST00000512707 SCARF1Q14162 830 aa13.13□□□□□ -0.31
PFDN1-204ENST00000512707 AOC3Q16853 763 aa13.13□□□□□ -0.31
PFDN1-204ENST00000512707 TMED8Q6PL24 325 aaPredicted RBP13.13□□□□□ -0.31
PFDN1-204ENST00000512707 TBC1D22AQ8WUA7 517 aa13.13□□□□□ -0.31
PFDN1-204ENST00000512707 JDP2Q8WYK2 163 aa13.13□□□□□ -0.31
PFDN1-204ENST00000512707 LRP2BPQ9P2M1 347 aa13.13□□□□□ -0.31
PFDN1-204ENST00000512707 ARFGEF1Q9Y6D6 1849 aa13.13□□□□□ -0.31
PFDN1-204ENST00000512707 ABCB7O75027 752 aa13.12□□□□□ -0.31
PFDN1-204ENST00000512707 IDH1O75874 414 aaKnown RBP13.12□□□□□ -0.31
PFDN1-204ENST00000512707 IARSP41252 1262 aaKnown RBP13.12□□□□□ -0.31
PFDN1-204ENST00000512707 DOK7Q18PE1 504 aa13.12□□□□□ -0.31
PFDN1-204ENST00000512707 PI16Q6UXB8 463 aa13.12□□□□□ -0.31
PFDN1-204ENST00000512707 NIM1KQ8IY84 436 aa13.12□□□□□ -0.31
PFDN1-204ENST00000512707 FBXW7Q969H0 707 aa13.12□□□□□ -0.31
PFDN1-204ENST00000512707 ZNF277Q9NRM2 450 aaPredicted RBP13.12□□□□□ -0.31
PFDN1-204ENST00000512707 ABCF2Q9UG63 623 aa13.12□□□□□ -0.31
PFDN1-204ENST00000512707 ECE2O60344 883 aa13.11□□□□□ -0.31
PFDN1-204ENST00000512707 CYP2E1P05181 493 aaPredicted RBP13.11□□□□□ -0.31
PFDN1-204ENST00000512707 HSPA6P17066 643 aa13.11□□□□□ -0.31
PFDN1-204ENST00000512707 ARHGAP27Q6ZUM4 889 aa13.11□□□□□ -0.31
PFDN1-204ENST00000512707 DBNDD1Q9H9R9 158 aa13.11□□□□□ -0.31
PFDN1-204ENST00000512707 RAI14Q9P0K7 980 aa13.11□□□□□ -0.31
PFDN1-204ENST00000512707 NDUFB9Q9Y6M9 179 aa13.11□□□□□ -0.31
PFDN1-204ENST00000512707 SALL1Q9NSC2 1324 aa13.11□□□□□ -0.31
PFDN1-204ENST00000512707 AK9Q5TCS8 1911 aa13.1□□□□□ -0.31
PFDN1-204ENST00000512707 MYH13Q9UKX3 1938 aa13.1□□□□□ -0.31
PFDN1-204ENST00000512707 LDHBP07195 334 aaKnown RBP13.1□□□□□ -0.31
PFDN1-204ENST00000512707 MFAP1P55081 439 aaKnown RBP13.1□□□□□ -0.31
PFDN1-204ENST00000512707 TBC1D9Q6ZT07 1266 aa13.1□□□□□ -0.31
PFDN1-204ENST00000512707 ERICH6Q7L0X2 663 aa13.1□□□□□ -0.31
PFDN1-204ENST00000512707 EDC3Q96F86 508 aaKnown RBP13.1□□□□□ -0.31
PFDN1-204ENST00000512707 UPF2Q9HAU5 1272 aaKnown RBP13.1□□□□□ -0.31
PFDN1-204ENST00000512707 FAM205AQ6ZU69 1335 aa13.1□□□□□ -0.31
PFDN1-204ENST00000512707 USP17L3A6NCW0 530 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 USP17L4A6NCW7 530 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 NFKBIEO00221 500 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 RNF113AO15541 343 aaKnown RBP13.09□□□□□ -0.31
PFDN1-204ENST00000512707 CHMLP26374 656 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 GTF2IP78347 998 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 GSTO1P78417 241 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 FER1L6Q2WGJ9 1857 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 MFSD14BQ5SR56 506 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 SLC9C2Q5TAH2 1124 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 STRIP1Q5VSL9 837 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 TTLL5Q6EMB2 1281 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 USP17L1Q7RTZ2 530 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 DZIP1Q86YF9 867 aaKnown RBP13.09□□□□□ -0.31
PFDN1-204ENST00000512707 SLF2Q8IX21 1173 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 ANTXR1Q9H6X2 564 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 PIH1D3Q9NQM4 214 aaKnown RBP13.09□□□□□ -0.31
PFDN1-204ENST00000512707 ZNRF3Q9ULT6 936 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms