RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 SETD1BQ9UPS6 1966 aaKnown RBP17.15■□□□□ 0.34
USP38-202ENST00000510377 MINDY4BA8MYZ0 360 aa17.15■□□□□ 0.34
USP38-202ENST00000510377 AFMP43652 599 aa17.15■□□□□ 0.34
USP38-202ENST00000510377 RESTQ13127 1097 aa17.15■□□□□ 0.34
USP38-202ENST00000510377 ORAI2Q96SN7 254 aa17.15■□□□□ 0.34
USP38-202ENST00000510377 GJB4Q9NTQ9 266 aa17.15■□□□□ 0.34
USP38-202ENST00000510377 CWC15Q9P013 229 aaKnown RBP17.15■□□□□ 0.34
USP38-202ENST00000510377 VWDEQ8N2E2 1590 aa17.15■□□□□ 0.34
USP38-202ENST00000510377 NAA16Q6N069 864 aaPredicted RBP17.15■□□□□ 0.34
USP38-202ENST00000510377 VPS37DQ86XT2 251 aa17.15■□□□□ 0.34
USP38-202ENST00000510377 SMARCE1Q969G3 411 aa17.15■□□□□ 0.34
USP38-202ENST00000510377 ARHGAP31Q2M1Z3 1444 aa17.15■□□□□ 0.34
USP38-202ENST00000510377 EVCP57679 992 aa17.15■□□□□ 0.34
USP38-202ENST00000510377 SALL3Q9BXA9 1300 aa17.14■□□□□ 0.33
USP38-202ENST00000510377 A0A1B0GUL7 405 aa17.14■□□□□ 0.33
USP38-202ENST00000510377 XBP1P17861 261 aa17.14■□□□□ 0.33
USP38-202ENST00000510377 LDHAL6AQ6ZMR3 332 aa17.14■□□□□ 0.33
USP38-202ENST00000510377 MRFAP1L1Q96HT8 127 aa17.14■□□□□ 0.33
USP38-202ENST00000510377 MYL10Q9BUA6 226 aa17.14■□□□□ 0.33
USP38-202ENST00000510377 AKAP2Q9Y2D5 859 aa17.14■□□□□ 0.33
USP38-202ENST00000510377 CLIC4Q9Y696 253 aa17.14■□□□□ 0.33
USP38-202ENST00000510377 KDRP35968 1356 aa17.14■□□□□ 0.33
USP38-202ENST00000510377 NSUN7Q8NE18 718 aaKnown RBP17.14■□□□□ 0.33
USP38-202ENST00000510377 PHKBQ93100 1093 aa17.14■□□□□ 0.33
USP38-202ENST00000510377 LLPHQ9BRT6 129 aaKnown RBP17.14■□□□□ 0.33
USP38-202ENST00000510377 PUF60Q9UHX1 559 aaKnown RBP17.14■□□□□ 0.33
USP38-202ENST00000510377 EPHA10Q5JZY3 1008 aa17.14■□□□□ 0.33
USP38-202ENST00000510377 SIRT1Q96EB6 747 aa17.14■□□□□ 0.33
USP38-202ENST00000510377 KIAA1468Q9P260 1216 aa17.14■□□□□ 0.33
USP38-202ENST00000510377 IL15P40933 162 aaPredicted RBP17.13■□□□□ 0.33
USP38-202ENST00000510377 JAKMIP3Q5VZ66 844 aa17.13■□□□□ 0.33
USP38-202ENST00000510377 ANO1Q5XXA6 986 aa17.13■□□□□ 0.33
USP38-202ENST00000510377 UBAC1Q9BSL1 405 aa17.13■□□□□ 0.33
USP38-202ENST00000510377 GABPB1Q06547 395 aaPredicted RBP17.13■□□□□ 0.33
USP38-202ENST00000510377 DDX17Q92841 729 aaKnown RBP17.13■□□□□ 0.33
USP38-202ENST00000510377 ABCF2Q9UG63 623 aa17.13■□□□□ 0.33
USP38-202ENST00000510377 KIF5CO60282 957 aa17.13■□□□□ 0.33
USP38-202ENST00000510377 SSRP1Q08945 709 aaKnown RBP17.13■□□□□ 0.33
USP38-202ENST00000510377 SLC9C2Q5TAH2 1124 aa17.13■□□□□ 0.33
USP38-202ENST00000510377 ARFGAP3Q9NP61 516 aa17.13■□□□□ 0.33
USP38-202ENST00000510377 MAP2P11137 1827 aaKnown RBP17.13■□□□□ 0.33
USP38-202ENST00000510377 PFKFB2O60825 505 aa17.12■□□□□ 0.33
USP38-202ENST00000510377 ZSCAN20P17040 1043 aaPredicted RBP17.12■□□□□ 0.33
USP38-202ENST00000510377 A2ML1A8K2U0 1454 aa17.12■□□□□ 0.33
USP38-202ENST00000510377 ZBTB43O43298 467 aa17.12■□□□□ 0.33
USP38-202ENST00000510377 MYL5Q02045 173 aa17.12■□□□□ 0.33
USP38-202ENST00000510377 NAP1L1P55209 391 aaKnown RBP17.12■□□□□ 0.33
USP38-202ENST00000510377 AXDND1Q5T1B0 1012 aaPredicted RBP17.12■□□□□ 0.33
USP38-202ENST00000510377 UTP14CQ5TAP6 766 aaKnown RBP17.12■□□□□ 0.33
USP38-202ENST00000510377 ERLIN1O75477 346 aa17.11■□□□□ 0.33
USP38-202ENST00000510377 FBXO38Q6PIJ6 1188 aa17.11■□□□□ 0.33
USP38-202ENST00000510377 BRMS1Q9HCU9 246 aa17.11■□□□□ 0.33
USP38-202ENST00000510377 VGLL3A8MV65 326 aa17.11■□□□□ 0.33
USP38-202ENST00000510377 PHACTR2O75167 634 aa17.11■□□□□ 0.33
USP38-202ENST00000510377 ACBD3Q9H3P7 528 aa17.11■□□□□ 0.33
USP38-202ENST00000510377 GOLPH3LQ9H4A5 285 aa17.11■□□□□ 0.33
USP38-202ENST00000510377 ABCA9Q8IUA7 1624 aa17.11■□□□□ 0.33
USP38-202ENST00000510377 PNOCQ13519 176 aa17.11■□□□□ 0.33
USP38-202ENST00000510377 TRMT44Q8IYL2 757 aaKnown RBP17.11■□□□□ 0.33
USP38-202ENST00000510377 ADCY9O60503 1353 aa17.11■□□□□ 0.33
USP38-202ENST00000510377 DEPDC5O75140 1603 aa17.11■□□□□ 0.33
USP38-202ENST00000510377 HSPD1P10809 573 aaKnown RBP17.11■□□□□ 0.33
USP38-202ENST00000510377 MYSM1Q5VVJ2 828 aa17.11■□□□□ 0.33
USP38-202ENST00000510377 HELBQ8NG08 1087 aaPredicted RBP17.11■□□□□ 0.33
USP38-202ENST00000510377 NACAP1Q9BZK3 213 aa17.11■□□□□ 0.33
USP38-202ENST00000510377 PDIA3P30101 505 aaKnown RBP17.1■□□□□ 0.33
USP38-202ENST00000510377 ZKSCAN3Q9BRR0 538 aa17.1■□□□□ 0.33
USP38-202ENST00000510377 LRP2BPQ9P2M1 347 aa17.1■□□□□ 0.33
USP38-202ENST00000510377 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.1■□□□□ 0.33
USP38-202ENST00000510377 KAT6BQ8WYB5 2073 aa17.1■□□□□ 0.33
USP38-202ENST00000510377 PFKFB1P16118 471 aa17.1■□□□□ 0.33
USP38-202ENST00000510377 PLA2G4DQ86XP0 818 aa17.1■□□□□ 0.33
USP38-202ENST00000510377 HELLSQ9NRZ9 838 aa17.1■□□□□ 0.33
USP38-202ENST00000510377 RAI14Q9P0K7 980 aa17.1■□□□□ 0.33
USP38-202ENST00000510377 MROH1Q8NDA8 1641 aa17.1■□□□□ 0.33
USP38-202ENST00000510377 REREQ9P2R6 1566 aa17.1■□□□□ 0.33
USP38-202ENST00000510377 B4E1Z4 1266 aa17.1■□□□□ 0.33
USP38-202ENST00000510377 CCDC70Q6NSX1 233 aa17.1■□□□□ 0.33
USP38-202ENST00000510377 RCOR1Q9UKL0 485 aa17.1■□□□□ 0.33
USP38-202ENST00000510377 PPLO60437 1756 aa17.1■□□□□ 0.33
USP38-202ENST00000510377 PIK3C2BO00750 1634 aa17.1■□□□□ 0.33
USP38-202ENST00000510377 MTX1Q13505 466 aa17.09■□□□□ 0.33
USP38-202ENST00000510377 ADALQ6DHV7 355 aa17.09■□□□□ 0.33
USP38-202ENST00000510377 MPHOSPH8Q99549 860 aa17.09■□□□□ 0.33
USP38-202ENST00000510377 LMTK3Q96Q04 1460 aa17.09■□□□□ 0.33
USP38-202ENST00000510377 EIF3JO75822 258 aaKnown RBP17.09■□□□□ 0.33
USP38-202ENST00000510377 A1BGP04217 495 aa17.09■□□□□ 0.33
USP38-202ENST00000510377 ADD1P35611 737 aaKnown RBP17.09■□□□□ 0.33
USP38-202ENST00000510377 ARHGEF28Q8N1W1 1705 aaKnown RBP17.09■□□□□ 0.33
USP38-202ENST00000510377 NLRP12P59046 1061 aa17.09■□□□□ 0.33
USP38-202ENST00000510377 ZNF827Q17R98 1081 aa17.09■□□□□ 0.33
USP38-202ENST00000510377 LRRC24Q50LG9 513 aa17.09■□□□□ 0.33
USP38-202ENST00000510377 BAG1Q99933 345 aaPredicted RBP17.09■□□□□ 0.33
USP38-202ENST00000510377 DESI2Q9BSY9 194 aa17.09■□□□□ 0.33
USP38-202ENST00000510377 FUCA2Q9BTY2 467 aa17.09■□□□□ 0.33
USP38-202ENST00000510377 TRIM34Q9BYJ4 488 aa17.09■□□□□ 0.33
USP38-202ENST00000510377 IQSEC3Q9UPP2 1182 aaPredicted RBP17.09■□□□□ 0.33
USP38-202ENST00000510377 COL9A3Q14050 684 aaPredicted RBP17.08■□□□□ 0.33
USP38-202ENST00000510377 BRAPQ7Z569 592 aa17.08■□□□□ 0.33
USP38-202ENST00000510377 NOC3LQ8WTT2 800 aaKnown RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms