RNA–Protein interactions for RNA: ENST00000510003.5

SNCAIP-214, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,039 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-214ENST00000510003 C1orf141Q5JVX7 400 aa16.91■□□□□ 0.3
SNCAIP-214ENST00000510003 BRAPQ7Z569 592 aa16.91■□□□□ 0.3
SNCAIP-214ENST00000510003 KBTBD3Q8NAB2 608 aa16.91■□□□□ 0.3
SNCAIP-214ENST00000510003 EDC3Q96F86 508 aaKnown RBP16.91■□□□□ 0.3
SNCAIP-214ENST00000510003 BCL11BQ9C0K0 894 aaPredicted RBP16.91■□□□□ 0.3
SNCAIP-214ENST00000510003 XIRP1Q702N8 1843 aaKnown RBP16.91■□□□□ 0.3
SNCAIP-214ENST00000510003 GOLGA6L9A6NEM1 432 aa16.91■□□□□ 0.3
SNCAIP-214ENST00000510003 NEURL1BA8MQ27 555 aa16.91■□□□□ 0.3
SNCAIP-214ENST00000510003 ZSCAN12O43309 604 aa16.91■□□□□ 0.3
SNCAIP-214ENST00000510003 PDIA3P30101 505 aaKnown RBP16.91■□□□□ 0.3
SNCAIP-214ENST00000510003 STK38Q15208 465 aa16.91■□□□□ 0.3
SNCAIP-214ENST00000510003 SF3A1Q15459 793 aaKnown RBP16.91■□□□□ 0.3
SNCAIP-214ENST00000510003 MUM1L1Q5H9M0 696 aa16.91■□□□□ 0.3
SNCAIP-214ENST00000510003 A0A087WWV3 80 aa16.9■□□□□ 0.3
SNCAIP-214ENST00000510003 A0A1B0GVL5 298 aa16.9■□□□□ 0.3
SNCAIP-214ENST00000510003 NPHP1O15259 732 aa16.9■□□□□ 0.3
SNCAIP-214ENST00000510003 FANCCQ00597 558 aa16.9■□□□□ 0.3
SNCAIP-214ENST00000510003 GCKRQ14397 625 aa16.9■□□□□ 0.3
SNCAIP-214ENST00000510003 TRIM65Q6PJ69 517 aa16.9■□□□□ 0.3
SNCAIP-214ENST00000510003 MPHOSPH8Q99549 860 aa16.9■□□□□ 0.3
SNCAIP-214ENST00000510003 LRRC2Q9BYS8 371 aa16.9■□□□□ 0.3
SNCAIP-214ENST00000510003 C19orf44Q9H6X5 657 aa16.9■□□□□ 0.3
SNCAIP-214ENST00000510003 SIPA1L3O60292 1781 aaPredicted RBP16.9■□□□□ 0.3
SNCAIP-214ENST00000510003 RFX5P48382 616 aaPredicted RBP16.89■□□□□ 0.29
SNCAIP-214ENST00000510003 MPRIPQ6WCQ1 1025 aa16.89■□□□□ 0.29
SNCAIP-214ENST00000510003 CCDC129Q6ZRS4 1044 aa16.89■□□□□ 0.29
SNCAIP-214ENST00000510003 LRRN4CLQ8ND94 238 aa16.89■□□□□ 0.29
SNCAIP-214ENST00000510003 SPTLC2O15270 562 aa16.89■□□□□ 0.29
SNCAIP-214ENST00000510003 CMA1P23946 247 aa16.89■□□□□ 0.29
SNCAIP-214ENST00000510003 GPS2Q13227 327 aa16.89■□□□□ 0.29
SNCAIP-214ENST00000510003 RIC3Q7Z5B4 369 aa16.89■□□□□ 0.29
SNCAIP-214ENST00000510003 ZNF202O95125 648 aa16.88■□□□□ 0.29
SNCAIP-214ENST00000510003 HNRNPH2P55795 449 aaKnown RBP16.88■□□□□ 0.29
SNCAIP-214ENST00000510003 PDIA6Q15084 440 aa16.88■□□□□ 0.29
SNCAIP-214ENST00000510003 RABL6Q3YEC7 729 aaPredicted RBP16.88■□□□□ 0.29
SNCAIP-214ENST00000510003 GPR161Q8N6U8 529 aaKnown RBP16.88■□□□□ 0.29
SNCAIP-214ENST00000510003 SEC62Q99442 399 aaKnown RBP16.88■□□□□ 0.29
SNCAIP-214ENST00000510003 ADAMTS7Q9UKP4 1686 aa16.88■□□□□ 0.29
SNCAIP-214ENST00000510003 E7EWF7 191 aa16.87■□□□□ 0.29
SNCAIP-214ENST00000510003 DHX16O60231 1041 aaKnown RBP16.87■□□□□ 0.29
SNCAIP-214ENST00000510003 CCT2P78371 535 aaKnown RBP16.87■□□□□ 0.29
SNCAIP-214ENST00000510003 PTPN12Q05209 780 aaKnown RBP16.87■□□□□ 0.29
SNCAIP-214ENST00000510003 TFCP2Q12800 502 aa16.87■□□□□ 0.29
SNCAIP-214ENST00000510003 KCNH5Q8NCM2 988 aa16.87■□□□□ 0.29
SNCAIP-214ENST00000510003 KLHDC4Q8TBB5 520 aa16.87■□□□□ 0.29
SNCAIP-214ENST00000510003 METTL22Q9BUU2 404 aaPredicted RBP16.87■□□□□ 0.29
SNCAIP-214ENST00000510003 FDPSP14324 419 aaKnown RBP16.87■□□□□ 0.29
SNCAIP-214ENST00000510003 FOSBP53539 338 aa16.87■□□□□ 0.29
SNCAIP-214ENST00000510003 REXO1L1PQ8IX06 675 aa16.87■□□□□ 0.29
SNCAIP-214ENST00000510003 ERCC4Q92889 916 aaPredicted RBP16.87■□□□□ 0.29
SNCAIP-214ENST00000510003 TUBE1Q9UJT0 475 aa16.87■□□□□ 0.29
SNCAIP-214ENST00000510003 PARP3Q9Y6F1 533 aa16.87■□□□□ 0.29
SNCAIP-214ENST00000510003 ARHGAP6O43182 974 aa16.86■□□□□ 0.29
SNCAIP-214ENST00000510003 EPHA10Q5JZY3 1008 aa16.86■□□□□ 0.29
SNCAIP-214ENST00000510003 ZMYM1Q5SVZ6 1142 aa16.86■□□□□ 0.29
SNCAIP-214ENST00000510003 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.86■□□□□ 0.29
SNCAIP-214ENST00000510003 URI1O94763 535 aaPredicted RBP16.86■□□□□ 0.29
SNCAIP-214ENST00000510003 MYL5Q02045 173 aa16.86■□□□□ 0.29
SNCAIP-214ENST00000510003 MYSM1Q5VVJ2 828 aa16.86■□□□□ 0.29
SNCAIP-214ENST00000510003 JAKMIP3Q5VZ66 844 aa16.86■□□□□ 0.29
SNCAIP-214ENST00000510003 VSTM4Q8IW00 320 aa16.86■□□□□ 0.29
SNCAIP-214ENST00000510003 FBXO18Q8NFZ0 1043 aa16.86■□□□□ 0.29
SNCAIP-214ENST00000510003 CERKQ8TCT0 537 aa16.86■□□□□ 0.29
SNCAIP-214ENST00000510003 FBXW7Q969H0 707 aa16.86■□□□□ 0.29
SNCAIP-214ENST00000510003 C8orf76Q96K31 380 aa16.86■□□□□ 0.29
SNCAIP-214ENST00000510003 NCOA5Q9HCD5 579 aaKnown RBP16.86■□□□□ 0.29
SNCAIP-214ENST00000510003 CLIC4Q9Y696 253 aa16.86■□□□□ 0.29
SNCAIP-214ENST00000510003 PXDNQ92626 1479 aa16.85■□□□□ 0.29
SNCAIP-214ENST00000510003 UBASH3AP57075 661 aa16.85■□□□□ 0.29
SNCAIP-214ENST00000510003 GUCY1B3Q02153 619 aa16.85■□□□□ 0.29
SNCAIP-214ENST00000510003 DBNDD2Q9BQY9 259 aa16.85■□□□□ 0.29
SNCAIP-214ENST00000510003 HSD3B7Q9H2F3 369 aa16.85■□□□□ 0.29
SNCAIP-214ENST00000510003 SLIT3O75094 1523 aa16.85■□□□□ 0.29
SNCAIP-214ENST00000510003 ZBTB22O15209 634 aa16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 CAPN2P17655 700 aa16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 ATF3P18847 181 aa16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 MAP3K9P80192 1104 aa16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 AIMP1Q12904 312 aaKnown RBP16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 AXDND1Q5T1B0 1012 aaPredicted RBP16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 SYNE3Q6ZMZ3 975 aa16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 DDX46Q7L014 1031 aaKnown RBP16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 ANKRD24Q8TF21 1146 aa16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 CARD6Q9BX69 1037 aa16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 GPR108Q9NPR9 543 aa16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 PSD3Q9NYI0 1048 aa16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 SPEF2Q9C093 1822 aa16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 FAM237AA0A1B0GTK4 181 aa16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 TBC1D8O95759 1140 aa16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 PFKFB1P16118 471 aa16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 LMOD1P29536 600 aaPredicted RBP16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 GORABQ5T7V8 394 aa16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 ANO1Q5XXA6 986 aa16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 CC2D1AQ6P1N0 951 aaPredicted RBP16.84■□□□□ 0.29
SNCAIP-214ENST00000510003 CAMTA1Q9Y6Y1 1673 aa16.83■□□□□ 0.29
SNCAIP-214ENST00000510003 PRAMEF22A3QJZ6 481 aa16.83■□□□□ 0.28
SNCAIP-214ENST00000510003 HSPD1P10809 573 aaKnown RBP16.83■□□□□ 0.28
SNCAIP-214ENST00000510003 TOP1P11387 765 aaKnown RBP16.83■□□□□ 0.28
SNCAIP-214ENST00000510003 RABGGTAQ92696 567 aa16.83■□□□□ 0.28
SNCAIP-214ENST00000510003 VWA3AA6NCI4 1184 aa16.82■□□□□ 0.28
SNCAIP-214ENST00000510003 SERPINC1P01008 464 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms