RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 SLC35B4Q969S0 331 aa12.36□□□□□ -0.43
PDLIM5-210ENST00000508216 MPHOSPH6Q99547 160 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-210ENST00000508216 ZNF510Q9Y2H8 683 aa12.36□□□□□ -0.43
PDLIM5-210ENST00000508216 PSDA5PKW4 1024 aaPredicted RBP12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 GOLGA6L9A6NEM1 432 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 LRRC10BA6NIK2 292 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 RASSF9O75901 435 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 RNF8O76064 485 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 RANBP1P43487 201 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 MIS18BP1Q6P0N0 1132 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 CCAR2Q8N163 923 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 GALNT15Q8N3T1 639 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 CCDC150Q8NCX0 1101 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 SCLT1Q96NL6 688 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 ANKIB1Q9P2G1 1089 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 ARHGAP25P42331 645 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 DRP2Q13474 957 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 CAPRIN2Q6IMN6 1127 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 FAM76AQ8TAV0 307 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 CUL5Q93034 780 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 NACA2Q9H009 215 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 GPCPD1Q9NPB8 672 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 DNAAF2Q9NVR5 837 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 MAGEC2Q9UBF1 373 aaPredicted RBP12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 DNAI1Q9UI46 699 aa12.35□□□□□ -0.43
PDLIM5-210ENST00000508216 EVC2Q86UK5 1308 aa12.34□□□□□ -0.43
PDLIM5-210ENST00000508216 ZNF644Q9H582 1327 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-210ENST00000508216 EFCAB5A4FU69 1503 aa12.34□□□□□ -0.43
PDLIM5-210ENST00000508216 A6NNZ2 444 aa12.34□□□□□ -0.43
PDLIM5-210ENST00000508216 ATP6V1G1O75348 118 aa12.34□□□□□ -0.43
PDLIM5-210ENST00000508216 USP5P45974 858 aa12.34□□□□□ -0.43
PDLIM5-210ENST00000508216 KRT72Q14CN4 511 aa12.34□□□□□ -0.43
PDLIM5-210ENST00000508216 TUBB8Q3ZCM7 444 aa12.34□□□□□ -0.43
PDLIM5-210ENST00000508216 ZNF394Q53GI3 561 aa12.34□□□□□ -0.43
PDLIM5-210ENST00000508216 CEP85LQ5SZL2 805 aa12.34□□□□□ -0.43
PDLIM5-210ENST00000508216 RABGGTAQ92696 567 aa12.34□□□□□ -0.43
PDLIM5-210ENST00000508216 CCDC85AQ96PX6 553 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-210ENST00000508216 GORASP1Q9BQQ3 440 aa12.34□□□□□ -0.43
PDLIM5-210ENST00000508216 JADE2Q9NQC1 790 aa12.34□□□□□ -0.43
PDLIM5-210ENST00000508216 LAMC3Q9Y6N6 1575 aa12.34□□□□□ -0.43
PDLIM5-210ENST00000508216 TMEM221A6NGB7 291 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 SMNDC1O75940 238 aaKnown RBP eCLIP12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 VIL1P09327 827 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 IDO1P14902 403 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 AKNAD1Q5T1N1 836 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 NUGGCQ68CJ6 796 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 FGD6Q6ZV73 1430 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 PARP9Q8IXQ6 854 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 PPP1R14BQ96C90 147 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 TRIM4Q9C037 500 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 KLC4Q9NSK0 619 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 VPS18Q9P253 973 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 DDX20Q9UHI6 824 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 GGA2Q9UJY4 613 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 PCDHB15Q9Y5E8 787 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 RALGAPBQ86X10 1494 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 UHRF1BP1Q6BDS2 1440 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 ABLIM1O14639 778 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 ZEB2O60315 1214 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 CAVIN2O95810 425 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 PENKP01210 267 aaPredicted RBP12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 TUBBP07437 444 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 MCCD1P59942 119 aaPredicted RBP12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 SLC7A5Q01650 507 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 IFFO1Q0D2I5 559 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 NAA25Q14CX7 972 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 LRRFIP1Q32MZ4 808 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 CCDC73Q6ZRK6 1079 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 LRRC8AQ8IWT6 810 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 TRIM58Q8NG06 486 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 ANKRD24Q8TF21 1146 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 NUP133Q8WUM0 1156 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 CACTINQ8WUQ7 758 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 BRD8Q9H0E9 1235 aa12.33□□□□□ -0.44
PDLIM5-210ENST00000508216 POTEB2H3BUK9 544 aa12.32□□□□□ -0.44
PDLIM5-210ENST00000508216 CBFA2T2O43439 604 aa12.32□□□□□ -0.44
PDLIM5-210ENST00000508216 COPB2P35606 906 aa12.32□□□□□ -0.44
PDLIM5-210ENST00000508216 MAGEA10P43363 369 aaPredicted RBP12.32□□□□□ -0.44
PDLIM5-210ENST00000508216 ZNF75DP51815 510 aa12.32□□□□□ -0.44
PDLIM5-210ENST00000508216 LRMPQ12912 555 aa12.32□□□□□ -0.44
PDLIM5-210ENST00000508216 CUL3Q13618 768 aa12.32□□□□□ -0.44
PDLIM5-210ENST00000508216 SARM1Q6SZW1 724 aa12.32□□□□□ -0.44
PDLIM5-210ENST00000508216 HDXQ7Z353 690 aa12.32□□□□□ -0.44
PDLIM5-210ENST00000508216 CNNM3Q8NE01 707 aa12.32□□□□□ -0.44
PDLIM5-210ENST00000508216 CCDC47Q96A33 483 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-210ENST00000508216 PHACTR1Q9C0D0 580 aa12.32□□□□□ -0.44
PDLIM5-210ENST00000508216 CD248Q9HCU0 757 aa12.32□□□□□ -0.44
PDLIM5-210ENST00000508216 TUBA8Q9NY65 449 aaPredicted RBP12.32□□□□□ -0.44
PDLIM5-210ENST00000508216 FAN1Q9Y2M0 1017 aa12.32□□□□□ -0.44
PDLIM5-210ENST00000508216 POLR3AO14802 1390 aaPredicted RBP12.32□□□□□ -0.44
PDLIM5-210ENST00000508216 UNCXA6NJT0 531 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 XBP1P17861 261 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 AMPHP49418 695 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 PSMD7P51665 324 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 DYNC1I2Q13409 638 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 DCTN1Q14203 1278 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 MYBPC3Q14896 1274 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 LONRF2Q1L5Z9 754 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 INF2Q27J81 1249 aa12.31□□□□□ -0.44
PDLIM5-210ENST00000508216 CCDC92Q53HC0 331 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms