RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 GRIN3BO60391 1043 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 MCAMP43121 646 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 RASGRF1Q13972 1273 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 GRIK5Q16478 980 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 TAF7LQ5H9L4 462 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 B4GALNT3Q6L9W6 998 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 PI16Q6UXB8 463 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 PODNQ7Z5L7 613 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 ERC1Q8IUD2 1116 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 CERS5Q8N5B7 392 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 CCDC8Q9H0W5 538 aaPredicted RBP6.1□□□□□ -1.43
LMNB1-208ENST00000504788 OSBPL3Q9H4L5 887 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 PPP4R2Q9NY27 417 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 STAP2Q9UGK3 403 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 PDS5AQ29RF7 1337 aaKnown RBP6.1□□□□□ -1.43
LMNB1-208ENST00000504788 FAM205AQ6ZU69 1335 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 ZNF541Q9H0D2 1346 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 SCN4AP35499 1836 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 AK9Q5TCS8 1911 aa6.09□□□□□ -1.43
LMNB1-208ENST00000504788 POTECB2RU33 542 aa6.09□□□□□ -1.43
LMNB1-208ENST00000504788 C6orf229H3BNL8 230 aa6.09□□□□□ -1.43
LMNB1-208ENST00000504788 RIMBP2O15034 1052 aa6.09□□□□□ -1.43
LMNB1-208ENST00000504788 ECE2O60344 883 aa6.09□□□□□ -1.43
LMNB1-208ENST00000504788 CXCL9Q07325 125 aa6.09□□□□□ -1.43
LMNB1-208ENST00000504788 GPR162Q16538 588 aa6.09□□□□□ -1.43
LMNB1-208ENST00000504788 DACT2Q5SW24 774 aa6.09□□□□□ -1.43
LMNB1-208ENST00000504788 ARHGAP27Q6ZUM4 889 aa6.09□□□□□ -1.43
LMNB1-208ENST00000504788 CENPQQ7L2Z9 268 aaPredicted RBP6.09□□□□□ -1.43
LMNB1-208ENST00000504788 CHD1LQ86WJ1 897 aa6.09□□□□□ -1.43
LMNB1-208ENST00000504788 PLEKHM2Q8IWE5 1019 aa6.09□□□□□ -1.43
LMNB1-208ENST00000504788 DBNDD1Q9H9R9 158 aa6.09□□□□□ -1.43
LMNB1-208ENST00000504788 HMG20BQ9P0W2 317 aa6.09□□□□□ -1.43
LMNB1-208ENST00000504788 FOCADQ5VW36 1801 aa6.09□□□□□ -1.43
LMNB1-208ENST00000504788 ZC3H4Q9UPT8 1303 aaKnown RBP6.09□□□□□ -1.43
LMNB1-208ENST00000504788 APBB1O00213 710 aa6.09□□□□□ -1.44
LMNB1-208ENST00000504788 PPIP5K2O43314 1243 aa6.09□□□□□ -1.44
LMNB1-208ENST00000504788 VIL1P09327 827 aaKnown RBP6.09□□□□□ -1.44
LMNB1-208ENST00000504788 HIBADHP31937 336 aaKnown RBP6.09□□□□□ -1.44
LMNB1-208ENST00000504788 PDE1AP54750 535 aa6.09□□□□□ -1.44
LMNB1-208ENST00000504788 DOK7Q18PE1 504 aa6.09□□□□□ -1.44
LMNB1-208ENST00000504788 ANKRD45Q5TZF3 282 aa6.09□□□□□ -1.44
LMNB1-208ENST00000504788 C9orf131Q5VYM1 1079 aa6.09□□□□□ -1.44
LMNB1-208ENST00000504788 AACSQ86V21 672 aa6.09□□□□□ -1.44
LMNB1-208ENST00000504788 SUPT20HQ8NEM7 779 aa6.09□□□□□ -1.44
LMNB1-208ENST00000504788 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.09□□□□□ -1.44
LMNB1-208ENST00000504788 ZC3H12CQ9C0D7 883 aaKnown RBP6.09□□□□□ -1.44
LMNB1-208ENST00000504788 LNPKQ9C0E8 428 aa6.09□□□□□ -1.44
LMNB1-208ENST00000504788 COA1Q9GZY4 146 aa6.09□□□□□ -1.44
LMNB1-208ENST00000504788 ZNRF3Q9ULT6 936 aa6.09□□□□□ -1.44
LMNB1-208ENST00000504788 AKAP2Q9Y2D5 859 aa6.09□□□□□ -1.44
LMNB1-208ENST00000504788 MYH2Q9UKX2 1941 aa6.08□□□□□ -1.44
LMNB1-208ENST00000504788 SALL1Q9NSC2 1324 aa6.08□□□□□ -1.44
LMNB1-208ENST00000504788 CYP2E1P05181 493 aaPredicted RBP6.08□□□□□ -1.44
LMNB1-208ENST00000504788 SLC5A1P13866 664 aa6.08□□□□□ -1.44
LMNB1-208ENST00000504788 ATP5JP18859 108 aa6.08□□□□□ -1.44
LMNB1-208ENST00000504788 SCNN1DP51172 638 aa6.08□□□□□ -1.44
LMNB1-208ENST00000504788 TSHZ3Q63HK5 1081 aa6.08□□□□□ -1.44
LMNB1-208ENST00000504788 MAMSTRQ6ZN01 415 aa6.08□□□□□ -1.44
LMNB1-208ENST00000504788 CLASRPQ8N2M8 674 aaKnown RBP6.08□□□□□ -1.44
LMNB1-208ENST00000504788 EYA3Q99504 573 aa6.08□□□□□ -1.44
LMNB1-208ENST00000504788 MXD3Q9BW11 206 aa6.08□□□□□ -1.44
LMNB1-208ENST00000504788 ANTXR1Q9H6X2 564 aa6.08□□□□□ -1.44
LMNB1-208ENST00000504788 NDUFB9Q9Y6M9 179 aa6.08□□□□□ -1.44
LMNB1-208ENST00000504788 DDX60LQ5H9U9 1706 aaKnown RBP6.08□□□□□ -1.44
LMNB1-208ENST00000504788 POLR2AP24928 1970 aaKnown RBP6.08□□□□□ -1.44
LMNB1-208ENST00000504788 PSMD14O00487 310 aa6.07□□□□□ -1.44
LMNB1-208ENST00000504788 SEMA3EO15041 775 aa6.07□□□□□ -1.44
LMNB1-208ENST00000504788 CHGBP05060 677 aa6.07□□□□□ -1.44
LMNB1-208ENST00000504788 IFIT1P09914 478 aaKnown RBP6.07□□□□□ -1.44
LMNB1-208ENST00000504788 GSPT1P15170 499 aaKnown RBP6.07□□□□□ -1.44
LMNB1-208ENST00000504788 FKBP1AP62942 108 aaKnown RBP6.07□□□□□ -1.44
LMNB1-208ENST00000504788 STRIP1Q5VSL9 837 aa6.07□□□□□ -1.44
LMNB1-208ENST00000504788 LARGE2Q8N3Y3 721 aa6.07□□□□□ -1.44
LMNB1-208ENST00000504788 ZBED3Q96IU2 234 aaPredicted RBP6.07□□□□□ -1.44
LMNB1-208ENST00000504788 L3MBTL3Q96JM7 780 aaPredicted RBP6.07□□□□□ -1.44
LMNB1-208ENST00000504788 NEUROD6Q96NK8 337 aa6.07□□□□□ -1.44
LMNB1-208ENST00000504788 RNF181Q9P0P0 153 aa6.07□□□□□ -1.44
LMNB1-208ENST00000504788 IQSEC3Q9UPP2 1182 aaPredicted RBP6.07□□□□□ -1.44
LMNB1-208ENST00000504788 AOX1Q06278 1338 aa6.07□□□□□ -1.44
LMNB1-208ENST00000504788 TTC41PQ6P2S7 1318 aa6.07□□□□□ -1.44
LMNB1-208ENST00000504788 SHTN1A0MZ66 631 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 EGFRP00533 1210 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 NEFLP07196 543 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 MX1P20591 662 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 PRDX5P30044 214 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 ZAP70P43403 619 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 OS9Q13438 667 aaPredicted RBP6.06□□□□□ -1.44
LMNB1-208ENST00000504788 ZNF804AQ7Z570 1209 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 PELP1Q8IZL8 1130 aaKnown RBP6.06□□□□□ -1.44
LMNB1-208ENST00000504788 EDC3Q96F86 508 aaKnown RBP6.06□□□□□ -1.44
LMNB1-208ENST00000504788 CCDC136Q96JN2 1154 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 HAUS7Q99871 368 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 ECHDC1Q9NTX5 307 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 GTF3C3Q9Y5Q9 886 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 SIPA1L1O43166 1804 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 TCRBV5S4A2TA0A5A2 114 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 USP17L3A6NCW0 530 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 USP17L4A6NCW7 530 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 GLTPD2A6NH11 291 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 RAD17O75943 681 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 335.6 ms