RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 CEP131Q9UPN4 1083 aa16.34■□□□□ 0.21
TCOF1-207ENST00000504761 IQGAP1P46940 1657 aa16.33■□□□□ 0.21
TCOF1-207ENST00000504761 KCNQ2O43526 872 aa16.33■□□□□ 0.2
TCOF1-207ENST00000504761 MYL10Q9BUA6 226 aa16.33■□□□□ 0.2
TCOF1-207ENST00000504761 GNAT2P19087 354 aa16.33■□□□□ 0.2
TCOF1-207ENST00000504761 ZSCAN23Q3MJ62 389 aa16.33■□□□□ 0.2
TCOF1-207ENST00000504761 OTUD7BQ6GQQ9 843 aa16.33■□□□□ 0.2
TCOF1-207ENST00000504761 ANTXR1Q9H6X2 564 aa16.33■□□□□ 0.2
TCOF1-207ENST00000504761 STAP2Q9UGK3 403 aa16.33■□□□□ 0.2
TCOF1-207ENST00000504761 TRPC5Q9UL62 973 aaPredicted RBP16.33■□□□□ 0.2
TCOF1-207ENST00000504761 MROH5Q6ZUA9 1318 aa16.33■□□□□ 0.2
TCOF1-207ENST00000504761 RASEFQ8IZ41 740 aa16.33■□□□□ 0.2
TCOF1-207ENST00000504761 INTS4Q96HW7 963 aaKnown RBP16.33■□□□□ 0.2
TCOF1-207ENST00000504761 SNAP23O00161 211 aa16.32■□□□□ 0.2
TCOF1-207ENST00000504761 CTDSPL2Q05D32 466 aa16.32■□□□□ 0.2
TCOF1-207ENST00000504761 SPATA31D1Q6ZQQ2 1576 aa16.32■□□□□ 0.2
TCOF1-207ENST00000504761 SRP68Q9UHB9 627 aaKnown RBP16.32■□□□□ 0.2
TCOF1-207ENST00000504761 TMEM131LA2VDJ0 1609 aa16.32■□□□□ 0.2
TCOF1-207ENST00000504761 RBM26Q5T8P6 1007 aaKnown RBP16.32■□□□□ 0.2
TCOF1-207ENST00000504761 TRMT1LQ7Z2T5 733 aaKnown RBP16.32■□□□□ 0.2
TCOF1-207ENST00000504761 RBM17Q96I25 401 aaKnown RBP16.32■□□□□ 0.2
TCOF1-207ENST00000504761 ZSCAN16Q9H4T2 348 aaPredicted RBP16.32■□□□□ 0.2
TCOF1-207ENST00000504761 ZC3H13Q5T200 1668 aaKnown RBP16.32■□□□□ 0.2
TCOF1-207ENST00000504761 EPS15P42566 896 aa16.32■□□□□ 0.2
TCOF1-207ENST00000504761 TMTC2Q8N394 836 aa16.32■□□□□ 0.2
TCOF1-207ENST00000504761 CNNM3Q8NE01 707 aa16.32■□□□□ 0.2
TCOF1-207ENST00000504761 MROH1Q8NDA8 1641 aa16.31■□□□□ 0.2
TCOF1-207ENST00000504761 PDE8BO95263 885 aa16.31■□□□□ 0.2
TCOF1-207ENST00000504761 CD2BP2O95400 341 aaKnown RBP16.31■□□□□ 0.2
TCOF1-207ENST00000504761 FILIP1LQ4L180 1135 aa16.31■□□□□ 0.2
TCOF1-207ENST00000504761 FEZ1Q99689 392 aa16.31■□□□□ 0.2
TCOF1-207ENST00000504761 DACT1Q9NYF0 836 aa16.31■□□□□ 0.2
TCOF1-207ENST00000504761 GGA1Q9UJY5 639 aa16.31■□□□□ 0.2
TCOF1-207ENST00000504761 SMIM5Q71RC9 77 aa16.31■□□□□ 0.2
TCOF1-207ENST00000504761 HAUS7Q99871 368 aa16.31■□□□□ 0.2
TCOF1-207ENST00000504761 CHRNDQ07001 517 aa16.31■□□□□ 0.2
TCOF1-207ENST00000504761 OGFOD1Q8N543 542 aa16.31■□□□□ 0.2
TCOF1-207ENST00000504761 DEPDC5O75140 1603 aa16.3■□□□□ 0.2
TCOF1-207ENST00000504761 NBPF26B4DH59 902 aa16.3■□□□□ 0.2
TCOF1-207ENST00000504761 NBPF14Q5TI25 921 aa16.3■□□□□ 0.2
TCOF1-207ENST00000504761 NBPF10Q6P3W6 841 aaKnown RBP16.3■□□□□ 0.2
TCOF1-207ENST00000504761 NBPF15Q8N660 670 aa16.3■□□□□ 0.2
TCOF1-207ENST00000504761 CHAMP1Q96JM3 812 aa16.3■□□□□ 0.2
TCOF1-207ENST00000504761 OSBPL3Q9H4L5 887 aa16.3■□□□□ 0.2
TCOF1-207ENST00000504761 TECPR2O15040 1411 aa16.3■□□□□ 0.2
TCOF1-207ENST00000504761 MAGEC2Q9UBF1 373 aaPredicted RBP16.3■□□□□ 0.2
TCOF1-207ENST00000504761 JAK2O60674 1132 aa16.3■□□□□ 0.2
TCOF1-207ENST00000504761 VEZTQ9HBM0 779 aa16.3■□□□□ 0.2
TCOF1-207ENST00000504761 DDX19AQ9NUU7 478 aaKnown RBP16.3■□□□□ 0.2
TCOF1-207ENST00000504761 DIP2AQ14689 1571 aa16.3■□□□□ 0.2
TCOF1-207ENST00000504761 NAP1L1P55209 391 aaKnown RBP16.29■□□□□ 0.2
TCOF1-207ENST00000504761 ADCK5Q3MIX3 580 aa16.29■□□□□ 0.2
TCOF1-207ENST00000504761 CFAP100Q494V2 611 aa16.29■□□□□ 0.2
TCOF1-207ENST00000504761 TEX11Q8IYF3 940 aa16.29■□□□□ 0.2
TCOF1-207ENST00000504761 SEPT12Q8IYM1 358 aa16.29■□□□□ 0.2
TCOF1-207ENST00000504761 CRB1P82279 1406 aa16.29■□□□□ 0.2
TCOF1-207ENST00000504761 ESPNB1AK53 854 aa16.29■□□□□ 0.2
TCOF1-207ENST00000504761 OFD1O75665 1012 aa16.29■□□□□ 0.2
TCOF1-207ENST00000504761 PKP1Q13835 747 aa16.29■□□□□ 0.2
TCOF1-207ENST00000504761 POLA2Q14181 598 aa16.29■□□□□ 0.2
TCOF1-207ENST00000504761 HEATR3Q7Z4Q2 680 aa16.29■□□□□ 0.2
TCOF1-207ENST00000504761 ZNF589Q86UQ0 364 aaPredicted RBP16.29■□□□□ 0.2
TCOF1-207ENST00000504761 CABP5Q9NP86 173 aa16.29■□□□□ 0.2
TCOF1-207ENST00000504761 ERFEQ4G0M1 354 aa16.28■□□□□ 0.2
TCOF1-207ENST00000504761 SUSD4Q5VX71 490 aa16.28■□□□□ 0.2
TCOF1-207ENST00000504761 CEP89Q96ST8 783 aa16.28■□□□□ 0.2
TCOF1-207ENST00000504761 ANO10Q9NW15 660 aa16.28■□□□□ 0.2
TCOF1-207ENST00000504761 STK32BQ9NY57 414 aa16.28■□□□□ 0.2
TCOF1-207ENST00000504761 E7EWF7 191 aa16.28■□□□□ 0.2
TCOF1-207ENST00000504761 HSPD1P10809 573 aaKnown RBP16.28■□□□□ 0.2
TCOF1-207ENST00000504761 PDE6AP16499 860 aa16.28■□□□□ 0.2
TCOF1-207ENST00000504761 STIM1Q13586 685 aa16.28■□□□□ 0.2
TCOF1-207ENST00000504761 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.28■□□□□ 0.2
TCOF1-207ENST00000504761 PALLDQ8WX93 1383 aa16.28■□□□□ 0.2
TCOF1-207ENST00000504761 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.28■□□□□ 0.2
TCOF1-207ENST00000504761 ZNF165P49910 485 aa16.28■□□□□ 0.2
TCOF1-207ENST00000504761 FAM177A1Q8N128 213 aaPredicted RBP16.28■□□□□ 0.2
TCOF1-207ENST00000504761 ME3Q16798 604 aa16.27■□□□□ 0.2
TCOF1-207ENST00000504761 SLFNL1Q499Z3 407 aa16.27■□□□□ 0.2
TCOF1-207ENST00000504761 SDR42E1Q8WUS8 393 aa16.27■□□□□ 0.2
TCOF1-207ENST00000504761 KIAA1210Q9ULL0 1709 aa16.27■□□□□ 0.2
TCOF1-207ENST00000504761 EIF6P56537 245 aaKnown RBP16.27■□□□□ 0.2
TCOF1-207ENST00000504761 H7C1W4 665 aa16.27■□□□□ 0.19
TCOF1-207ENST00000504761 DPP8Q6V1X1 898 aaPredicted RBP16.27■□□□□ 0.19
TCOF1-207ENST00000504761 DACH1Q9UI36 760 aa16.27■□□□□ 0.19
TCOF1-207ENST00000504761 TANGO6Q9C0B7 1094 aa16.27■□□□□ 0.19
TCOF1-207ENST00000504761 BMP2KQ9NSY1 1161 aaPredicted RBP16.27■□□□□ 0.19
TCOF1-207ENST00000504761 ANGEL1Q9UNK9 670 aaKnown RBP16.27■□□□□ 0.19
TCOF1-207ENST00000504761 TTLL11Q8NHH1 800 aa16.26■□□□□ 0.19
TCOF1-207ENST00000504761 PHKBQ93100 1093 aa16.26■□□□□ 0.19
TCOF1-207ENST00000504761 hCG_1642624A0A1W2PR95 340 aa16.26■□□□□ 0.19
TCOF1-207ENST00000504761 FGAP02671 866 aa16.26■□□□□ 0.19
TCOF1-207ENST00000504761 RIMS1Q86UR5 1692 aaKnown RBP16.26■□□□□ 0.19
TCOF1-207ENST00000504761 LSG1Q9H089 658 aaKnown RBP16.26■□□□□ 0.19
TCOF1-207ENST00000504761 CEP170BQ9Y4F5 1589 aaPredicted RBP16.26■□□□□ 0.19
TCOF1-207ENST00000504761 ADCY9O60503 1353 aa16.26■□□□□ 0.19
TCOF1-207ENST00000504761 HSP90AA4PQ58FG1 418 aa16.25■□□□□ 0.19
TCOF1-207ENST00000504761 MAPKAPK5Q8IW41 473 aa16.25■□□□□ 0.19
TCOF1-207ENST00000504761 VSIG10Q8N0Z9 540 aa16.25■□□□□ 0.19
TCOF1-207ENST00000504761 EYA3Q99504 573 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms