RNA–Protein interactions for RNA: ENST00000504290.5

TP53-208, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-208	ENST00000504290	TADA3	O75528	432 aa		13.86	□□□□□ -0.19
TP53-208	ENST00000504290	SMC1A	Q14683	1233 aa	Known RBP	13.86	□□□□□ -0.19
TP53-208	ENST00000504290	SRL	Q86TD4	932 aa		13.86	□□□□□ -0.19
TP53-208	ENST00000504290	C10orf67	Q8IYJ2	551 aa		13.86	□□□□□ -0.19
TP53-208	ENST00000504290	USP44	Q9H0E7	712 aa		13.86	□□□□□ -0.19
TP53-208	ENST00000504290	ADCY9	O60503	1353 aa		13.86	□□□□□ -0.19
TP53-208	ENST00000504290	TBC1D8	O95759	1140 aa		13.86	□□□□□ -0.19
TP53-208	ENST00000504290	TAT	P17735	454 aa	Predicted RBP	13.86	□□□□□ -0.19
TP53-208	ENST00000504290	SFPQ	P23246	707 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
TP53-208	ENST00000504290	HSP90AB4P	Q58FF6	505 aa		13.86	□□□□□ -0.19
TP53-208	ENST00000504290	ATG3	Q9NT62	314 aa		13.86	□□□□□ -0.19
TP53-208	ENST00000504290	REST	Q13127	1097 aa		13.85	□□□□□ -0.19
TP53-208	ENST00000504290	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.85	□□□□□ -0.19
TP53-208	ENST00000504290	NOM1	Q5C9Z4	860 aa	Known RBP	13.85	□□□□□ -0.19
TP53-208	ENST00000504290	CREB3L3	Q68CJ9	461 aa		13.85	□□□□□ -0.19
TP53-208	ENST00000504290	CHADL	Q6NUI6	762 aa		13.85	□□□□□ -0.19
TP53-208	ENST00000504290	HOMER1	Q86YM7	354 aa		13.85	□□□□□ -0.19
TP53-208	ENST00000504290	BRMS1	Q9HCU9	246 aa		13.85	□□□□□ -0.19
TP53-208	ENST00000504290	DNAI1	Q9UI46	699 aa		13.85	□□□□□ -0.19
TP53-208	ENST00000504290	EIF2S2	P20042	333 aa	Known RBP	13.85	□□□□□ -0.19
TP53-208	ENST00000504290	HSPA2	P54652	639 aa		13.85	□□□□□ -0.19
TP53-208	ENST00000504290	ICE2	Q659A1	982 aa		13.85	□□□□□ -0.19
TP53-208	ENST00000504290	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.85	□□□□□ -0.19
TP53-208	ENST00000504290	CERS3	Q8IU89	383 aa		13.85	□□□□□ -0.19
TP53-208	ENST00000504290	GPR161	Q8N6U8	529 aa	Known RBP	13.85	□□□□□ -0.19
TP53-208	ENST00000504290	DBF4	Q9UBU7	674 aa	Predicted RBP	13.85	□□□□□ -0.19
TP53-208	ENST00000504290	GTF2A1	P52655	376 aa	Predicted RBP	13.84	□□□□□ -0.19
TP53-208	ENST00000504290	MFSD10	Q14728	455 aa		13.84	□□□□□ -0.19
TP53-208	ENST00000504290	ARMCX5	Q6P1M9	558 aa		13.84	□□□□□ -0.19
TP53-208	ENST00000504290	BLOC1S2	Q6QNY1	142 aa		13.84	□□□□□ -0.19
TP53-208	ENST00000504290	PPP1R42	Q7Z4L9	355 aa		13.84	□□□□□ -0.19
TP53-208	ENST00000504290	MAP4K1	Q92918	833 aa		13.84	□□□□□ -0.19
TP53-208	ENST00000504290	PHAX	Q9H814	394 aa	Known RBP	13.84	□□□□□ -0.19
TP53-208	ENST00000504290	NLRP2	Q9NX02	1062 aa		13.84	□□□□□ -0.19
TP53-208	ENST00000504290	CHPF2	Q9P2E5	772 aa		13.84	□□□□□ -0.19
TP53-208	ENST00000504290	RBM8A	Q9Y5S9	174 aa	Known RBP	13.84	□□□□□ -0.19
TP53-208	ENST00000504290	PARP4	Q9UKK3	1724 aa	Known RBP	13.84	□□□□□ -0.19
TP53-208	ENST00000504290	MRC1	P22897	1456 aa		13.84	□□□□□ -0.19
TP53-208	ENST00000504290	KCNQ3	O43525	872 aa		13.84	□□□□□ -0.19
TP53-208	ENST00000504290	KIN	O60870	393 aa	Known RBP	13.84	□□□□□ -0.19
TP53-208	ENST00000504290	IVL	P07476	585 aa		13.84	□□□□□ -0.19
TP53-208	ENST00000504290	CCDC73	Q6ZRK6	1079 aa		13.84	□□□□□ -0.19
TP53-208	ENST00000504290	REXO1L1P	Q8IX06	675 aa		13.84	□□□□□ -0.19
TP53-208	ENST00000504290	BPIFA3	Q9BQP9	254 aa		13.84	□□□□□ -0.19
TP53-208	ENST00000504290	RRP15	Q9Y3B9	282 aa	Known RBP	13.84	□□□□□ -0.19
TP53-208	ENST00000504290	SASH3	O75995	380 aa		13.83	□□□□□ -0.2
TP53-208	ENST00000504290	ACTN2	P35609	894 aa		13.83	□□□□□ -0.2
TP53-208	ENST00000504290	CCAR1	Q8IX12	1150 aa	Known RBP	13.83	□□□□□ -0.2
TP53-208	ENST00000504290	AOPEP	Q8N6M6	819 aa		13.83	□□□□□ -0.2
TP53-208	ENST00000504290	DNAAF4	Q8WXU2	420 aa		13.83	□□□□□ -0.2
TP53-208	ENST00000504290	DDX27	Q96GQ7	796 aa	Known RBP	13.83	□□□□□ -0.2
TP53-208	ENST00000504290	ARFGAP3	Q9NP61	516 aa		13.83	□□□□□ -0.2
TP53-208	ENST00000504290	LCMT1	Q9UIC8	334 aa		13.83	□□□□□ -0.2
TP53-208	ENST00000504290	RCOR1	Q9UKL0	485 aa		13.83	□□□□□ -0.2
TP53-208	ENST00000504290	HIP1	O00291	1037 aa		13.82	□□□□□ -0.2
TP53-208	ENST00000504290	SEC31A	O94979	1220 aa	Known RBP	13.82	□□□□□ -0.2
TP53-208	ENST00000504290	RPS6KB1	P23443	525 aa		13.82	□□□□□ -0.2
TP53-208	ENST00000504290	ATL3	Q6DD88	541 aa		13.82	□□□□□ -0.2
TP53-208	ENST00000504290	DDX17	Q92841	729 aa	Known RBP	13.82	□□□□□ -0.2
TP53-208	ENST00000504290	CRISPLD2	Q9H0B8	497 aa		13.82	□□□□□ -0.2
TP53-208	ENST00000504290	ZCCHC17	Q9NP64	241 aa	Known RBP	13.82	□□□□□ -0.2
TP53-208	ENST00000504290	ADAM21	Q9UKJ8	722 aa		13.82	□□□□□ -0.2
TP53-208	ENST00000504290	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.82	□□□□□ -0.2
TP53-208	ENST00000504290	MEGF6	O75095	1541 aa		13.82	□□□□□ -0.2
TP53-208	ENST00000504290	FAM160A1	Q05DH4	1040 aa		13.82	□□□□□ -0.2
TP53-208	ENST00000504290	GORAB	Q5T7V8	394 aa		13.82	□□□□□ -0.2
TP53-208	ENST00000504290	JAKMIP3	Q5VZ66	844 aa		13.82	□□□□□ -0.2
TP53-208	ENST00000504290	TRIM65	Q6PJ69	517 aa		13.82	□□□□□ -0.2
TP53-208	ENST00000504290	ZNF579	Q8NAF0	562 aa	Known RBP	13.82	□□□□□ -0.2
TP53-208	ENST00000504290	EVI5L	Q96CN4	794 aa		13.82	□□□□□ -0.2
TP53-208	ENST00000504290	SNRK	Q9NRH2	765 aa		13.82	□□□□□ -0.2
TP53-208	ENST00000504290		A0A1B0GUL7	405 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	SLC27A2	O14975	620 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	CSB-PGBD3	P0DP91	1061 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	EVC	P57679	992 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	BRINP3	Q76B58	766 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	TMC6	Q7Z403	805 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	ENGASE	Q8NFI3	743 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	CARD6	Q9BX69	1037 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	KDM6A	O15550	1401 aa	Predicted RBP	13.81	□□□□□ -0.2
TP53-208	ENST00000504290		H3BQV1	296 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	URI1	O94763	535 aa	Predicted RBP	13.81	□□□□□ -0.2
TP53-208	ENST00000504290	PHKG2	P15735	406 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	TOB2	Q14106	344 aa	Predicted RBP	13.81	□□□□□ -0.2
TP53-208	ENST00000504290	IFFO2	Q5TF58	517 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	FCHSD1	Q86WN1	690 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	IFNL1	Q8IU54	200 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	IFNL2	Q8IZJ0	200 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	GPATCH3	Q96I76	525 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	MPHOSPH8	Q99549	860 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	XPO4	Q9C0E2	1151 aa	Known RBP	13.81	□□□□□ -0.2
TP53-208	ENST00000504290	HDAC5	Q9UQL6	1122 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	ABCA3	Q99758	1704 aa		13.81	□□□□□ -0.2
TP53-208	ENST00000504290	C5	P01031	1676 aa		13.8	□□□□□ -0.2
TP53-208	ENST00000504290	PITPNM1	O00562	1244 aa		13.8	□□□□□ -0.2
TP53-208	ENST00000504290	SRGAP3	O43295	1099 aa		13.8	□□□□□ -0.2
TP53-208	ENST00000504290	TSGA10IP	Q3SY00	556 aa		13.8	□□□□□ -0.2
TP53-208	ENST00000504290	BEND3	Q5T5X7	828 aa		13.8	□□□□□ -0.2
TP53-208	ENST00000504290	LEKR1	Q6ZMV7	388 aa		13.8	□□□□□ -0.2
TP53-208	ENST00000504290	DDX54	Q8TDD1	881 aa	Known RBP	13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms