RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SPECC1Q5M775 1068 aa19.59■□□□□ 0.73
HMGXB3-201ENST00000502717 DHX37Q8IY37 1157 aaKnown RBP19.59■□□□□ 0.73
HMGXB3-201ENST00000502717 CHD1O14646 1710 aa19.58■□□□□ 0.73
HMGXB3-201ENST00000502717 GOLGA6L10A0A0M3HER8 536 aa19.58■□□□□ 0.73
HMGXB3-201ENST00000502717 IFNL2Q8IZJ0 200 aa19.58■□□□□ 0.73
HMGXB3-201ENST00000502717 TACC1O75410 805 aa19.58■□□□□ 0.72
HMGXB3-201ENST00000502717 TTF2Q9UNY4 1162 aaKnown RBP19.58■□□□□ 0.72
HMGXB3-201ENST00000502717 ERVK-7P63135 1459 aa19.58■□□□□ 0.72
HMGXB3-201ENST00000502717 CCDC85AQ96PX6 553 aaPredicted RBP19.58■□□□□ 0.72
HMGXB3-201ENST00000502717 NAPGQ99747 312 aaPredicted RBP19.58■□□□□ 0.72
HMGXB3-201ENST00000502717 ZSWIM6Q9HCJ5 1215 aa19.58■□□□□ 0.72
HMGXB3-201ENST00000502717 AKR1B10O60218 316 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 IFIT5Q13325 482 aaKnown RBP19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 BICDL1Q6ZP65 573 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 TMEM87AQ8NBN3 555 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 ATRIPQ8WXE1 791 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 ZHX3Q9H4I2 956 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 SNRKQ9NRH2 765 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 ZFYVE27Q5T4F4 411 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 NBPF14Q5TI25 921 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 VPS36Q86VN1 386 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 IQCA1Q86XH1 822 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 BABAM1Q9NWV8 329 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 STAP2Q9UGK3 403 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 GUCA1BQ9UMX6 200 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 MLH3Q9UHC1 1453 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 A6NNZ2 444 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 DNA2P51530 1060 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 TUBB8Q3ZCM7 444 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 NRBP1Q9UHY1 535 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 ADCY10Q96PN6 1610 aa19.57■□□□□ 0.72
HMGXB3-201ENST00000502717 ANO1Q5XXA6 986 aa19.56■□□□□ 0.72
HMGXB3-201ENST00000502717 TRIM47Q96LD4 638 aa19.56■□□□□ 0.72
HMGXB3-201ENST00000502717 PTCD1O75127 700 aaKnown RBP19.56■□□□□ 0.72
HMGXB3-201ENST00000502717 GBP2P32456 591 aaPredicted RBP19.56■□□□□ 0.72
HMGXB3-201ENST00000502717 SPTLC3Q9NUV7 552 aa19.56■□□□□ 0.72
HMGXB3-201ENST00000502717 PAG1Q9NWQ8 432 aa19.56■□□□□ 0.72
HMGXB3-201ENST00000502717 SPECC1LQ69YQ0 1117 aa19.56■□□□□ 0.72
HMGXB3-201ENST00000502717 TICAM2Q86XR7 235 aa19.56■□□□□ 0.72
HMGXB3-201ENST00000502717 ZNF202O95125 648 aa19.56■□□□□ 0.72
HMGXB3-201ENST00000502717 EZRP15311 586 aaKnown RBP19.56■□□□□ 0.72
HMGXB3-201ENST00000502717 NLRP5P59047 1200 aa19.56■□□□□ 0.72
HMGXB3-201ENST00000502717 KIF5AQ12840 1032 aa19.56■□□□□ 0.72
HMGXB3-201ENST00000502717 CCDC96Q2M329 555 aa19.56■□□□□ 0.72
HMGXB3-201ENST00000502717 ZCCHC11Q5TAX3 1644 aaKnown RBP19.56■□□□□ 0.72
HMGXB3-201ENST00000502717 MINDY4BA8MYZ0 360 aa19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 SSBP05455 408 aaKnown RBP eCLIP19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 SEPT7Q16181 437 aaKnown RBP19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 ANKRD13DQ6ZTN6 518 aa19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 PAXIP1Q6ZW49 1069 aaPredicted RBP19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 B4GALNT4Q76KP1 1039 aa19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 CACTINQ8WUQ7 758 aaKnown RBP19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 FAM227BQ96M60 508 aa19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 GBP6Q6ZN66 633 aa19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 POTEDQ86YR6 584 aa19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 GCOM1H8Y6P7 765 aaPredicted RBP19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 MYZAPP0CAP1 466 aa19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 CATIPQ7Z7H3 387 aa19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 SIRT2Q8IXJ6 389 aa19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 ARFGAP2Q8N6H7 521 aa19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 GOLGA5Q8TBA6 731 aa19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 NCKAP5LQ9HCH0 1330 aa19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 GIGYF2Q6Y7W6 1299 aaKnown RBP19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 NEK11Q8NG66 645 aa19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 CLASP1Q7Z460 1538 aa19.55■□□□□ 0.72
HMGXB3-201ENST00000502717 NEFHP12036 1026 aa19.54■□□□□ 0.72
HMGXB3-201ENST00000502717 MYOM2P54296 1465 aa19.54■□□□□ 0.72
HMGXB3-201ENST00000502717 AMPD3Q01432 767 aa19.54■□□□□ 0.72
HMGXB3-201ENST00000502717 ATP2B3Q16720 1220 aa19.54■□□□□ 0.72
HMGXB3-201ENST00000502717 CFAP65Q6ZU64 1925 aaKnown RBP19.54■□□□□ 0.72
HMGXB3-201ENST00000502717 MFSD6Q6ZSS7 791 aa19.54■□□□□ 0.72
HMGXB3-201ENST00000502717 CCDC121Q6ZUS5 278 aa19.54■□□□□ 0.72
HMGXB3-201ENST00000502717 TMTC2Q8N394 836 aa19.54■□□□□ 0.72
HMGXB3-201ENST00000502717 CCDC113Q9H0I3 377 aa19.54■□□□□ 0.72
HMGXB3-201ENST00000502717 KCNA6P17658 529 aa19.54■□□□□ 0.72
HMGXB3-201ENST00000502717 TERF2Q15554 542 aa19.54■□□□□ 0.72
HMGXB3-201ENST00000502717 IGSF22Q8N9C0 903 aa19.54■□□□□ 0.72
HMGXB3-201ENST00000502717 SSH3Q8TE77 659 aa19.54■□□□□ 0.72
HMGXB3-201ENST00000502717 KIAA1468Q9P260 1216 aa19.54■□□□□ 0.72
HMGXB3-201ENST00000502717 CCDC194A0A1B0GVG4 234 aa19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 UBA7P41226 1012 aa19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 HSPA2P54652 639 aa19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 CHST3Q7LGC8 479 aa19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 HELLSQ9NRZ9 838 aa19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 ZFYVE16Q7Z3T8 1539 aa19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 RNF113AO15541 343 aaKnown RBP19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 JAK2O60674 1132 aa19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 DDX41Q9UJV9 622 aaKnown RBP19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 MAP3K5Q99683 1374 aa19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 MAP3K19Q56UN5 1328 aa19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 NCBP1Q09161 790 aaKnown RBP19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 DHX58Q96C10 678 aa19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 ADALQ6DHV7 355 aa19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 MLKLQ8NB16 471 aa19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 CAPZA3Q96KX2 299 aa19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 CWC25Q9NXE8 425 aaPredicted RBP19.53■□□□□ 0.72
HMGXB3-201ENST00000502717 CDC42BPAQ5VT25 1732 aa19.52■□□□□ 0.72
HMGXB3-201ENST00000502717 DTNBO60941 627 aa19.52■□□□□ 0.72
HMGXB3-201ENST00000502717 IL15P40933 162 aaPredicted RBP19.52■□□□□ 0.72
HMGXB3-201ENST00000502717 VAV2P52735 878 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms