RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-222ENST00000498801 PPP1R12BO60237 982 aaPredicted RBP9.92□□□□□ -0.82
GARNL3-222ENST00000498801 ABL1P00519 1130 aa9.92□□□□□ -0.82
GARNL3-222ENST00000498801 FBLN1P23142 703 aa9.92□□□□□ -0.82
GARNL3-222ENST00000498801 ZNF211Q13398 564 aaPredicted RBP9.92□□□□□ -0.82
GARNL3-222ENST00000498801 RALBP1Q15311 655 aa9.92□□□□□ -0.82
GARNL3-222ENST00000498801 DIEXFQ68CQ4 756 aaKnown RBP9.92□□□□□ -0.82
GARNL3-222ENST00000498801 FHDC1Q9C0D6 1143 aaPredicted RBP9.92□□□□□ -0.82
GARNL3-222ENST00000498801 IQSEC3Q9UPP2 1182 aaPredicted RBP9.92□□□□□ -0.82
GARNL3-222ENST00000498801 OVOS2A0A0G2JMS6 1433 aa9.91□□□□□ -0.82
GARNL3-222ENST00000498801 MEN1O00255 615 aa9.91□□□□□ -0.82
GARNL3-222ENST00000498801 ANP32CO43423 234 aa9.91□□□□□ -0.82
GARNL3-222ENST00000498801 AMPHP49418 695 aa9.91□□□□□ -0.82
GARNL3-222ENST00000498801 EVA1CP58658 441 aa9.91□□□□□ -0.82
GARNL3-222ENST00000498801 RGS22Q8NE09 1264 aa9.91□□□□□ -0.82
GARNL3-222ENST00000498801 PRKRIP1Q9H875 184 aaPredicted RBP9.91□□□□□ -0.82
GARNL3-222ENST00000498801 STRN4Q9NRL3 753 aa9.91□□□□□ -0.82
GARNL3-222ENST00000498801 RGPD1P0DJD0 1748 aa9.9□□□□□ -0.82
GARNL3-222ENST00000498801 KDRP35968 1356 aa9.9□□□□□ -0.82
GARNL3-222ENST00000498801 IGSF1Q8N6C5 1336 aa9.9□□□□□ -0.82
GARNL3-222ENST00000498801 CDK2AP1O14519 115 aa9.9□□□□□ -0.82
GARNL3-222ENST00000498801 PSMA6P60900 246 aaKnown RBP9.9□□□□□ -0.82
GARNL3-222ENST00000498801 HSP90AB2PQ58FF8 381 aa9.9□□□□□ -0.82
GARNL3-222ENST00000498801 TOM1L2Q6ZVM7 507 aa9.9□□□□□ -0.82
GARNL3-222ENST00000498801 NBPF15Q8N660 670 aa9.9□□□□□ -0.82
GARNL3-222ENST00000498801 GTF3C2Q8WUA4 911 aaPredicted RBP9.9□□□□□ -0.82
GARNL3-222ENST00000498801 VTI1AQ96AJ9 217 aa9.9□□□□□ -0.82
GARNL3-222ENST00000498801 ZNF395Q9H8N7 513 aaPredicted RBP9.9□□□□□ -0.82
GARNL3-222ENST00000498801 MAP2P11137 1827 aaKnown RBP9.89□□□□□ -0.83
GARNL3-222ENST00000498801 MEGF6O75095 1541 aa9.89□□□□□ -0.83
GARNL3-222ENST00000498801 H3BRB1 525 aa9.89□□□□□ -0.83
GARNL3-222ENST00000498801 PPP2R1AP30153 589 aa9.89□□□□□ -0.83
GARNL3-222ENST00000498801 CENPCQ03188 943 aa9.89□□□□□ -0.83
GARNL3-222ENST00000498801 STAG2Q8N3U4 1231 aa9.89□□□□□ -0.83
GARNL3-222ENST00000498801 NLRP3Q96P20 1036 aa9.89□□□□□ -0.83
GARNL3-222ENST00000498801 C2orf49Q9BVC5 232 aaPredicted RBP9.89□□□□□ -0.83
GARNL3-222ENST00000498801 TUT1Q9H6E5 874 aaKnown RBP9.89□□□□□ -0.83
GARNL3-222ENST00000498801 ANO2Q9NQ90 1003 aa9.89□□□□□ -0.83
GARNL3-222ENST00000498801 DNMT3AQ9Y6K1 912 aaPredicted RBP9.89□□□□□ -0.83
GARNL3-222ENST00000498801 MYBBP1AQ9BQG0 1328 aaKnown RBP9.88□□□□□ -0.83
GARNL3-222ENST00000498801 PPM1GO15355 546 aaPredicted RBP9.88□□□□□ -0.83
GARNL3-222ENST00000498801 ICMTO60725 284 aa9.88□□□□□ -0.83
GARNL3-222ENST00000498801 MTHFSP49914 203 aa9.88□□□□□ -0.83
GARNL3-222ENST00000498801 NAA30Q147X3 362 aaPredicted RBP9.88□□□□□ -0.83
GARNL3-222ENST00000498801 KRT27Q7Z3Y8 459 aa9.88□□□□□ -0.83
GARNL3-222ENST00000498801 CAPN5O15484 640 aaPredicted RBP9.87□□□□□ -0.83
GARNL3-222ENST00000498801 RGS20O76081 388 aa9.87□□□□□ -0.83
GARNL3-222ENST00000498801 IL2RBP14784 551 aa9.87□□□□□ -0.83
GARNL3-222ENST00000498801 EIF4A2Q14240 407 aaKnown RBP9.87□□□□□ -0.83
GARNL3-222ENST00000498801 NBPF6Q5VWK0 638 aa9.87□□□□□ -0.83
GARNL3-222ENST00000498801 ZNF295-AS1Q8N0V1 137 aa9.87□□□□□ -0.83
GARNL3-222ENST00000498801 NBPF4Q96M43 638 aa9.87□□□□□ -0.83
GARNL3-222ENST00000498801 TSEN34Q9BSV6 310 aaKnown RBP9.87□□□□□ -0.83
GARNL3-222ENST00000498801 BIN2Q9UBW5 565 aaPredicted RBP9.87□□□□□ -0.83
GARNL3-222ENST00000498801 PDZRN3Q9UPQ7 1066 aa9.87□□□□□ -0.83
GARNL3-222ENST00000498801 MTMR3Q13615 1198 aa9.86□□□□□ -0.83
GARNL3-222ENST00000498801 PKD1L3Q7Z443 1732 aa9.86□□□□□ -0.83
GARNL3-222ENST00000498801 GLYCTKQ8IVS8 523 aa9.86□□□□□ -0.83
GARNL3-222ENST00000498801 LINC00528Q8N1L1 170 aa9.86□□□□□ -0.83
GARNL3-222ENST00000498801 HELQQ8TDG4 1101 aa9.86□□□□□ -0.83
GARNL3-222ENST00000498801 ZSCAN10Q96SZ4 725 aaPredicted RBP9.86□□□□□ -0.83
GARNL3-222ENST00000498801 NLRP2Q9NX02 1062 aa9.86□□□□□ -0.83
GARNL3-222ENST00000498801 CHMP3Q9Y3E7 222 aa9.86□□□□□ -0.83
GARNL3-222ENST00000498801 RGPD5Q99666 1765 aa9.86□□□□□ -0.83
GARNL3-222ENST00000498801 EML1O00423 815 aa9.85□□□□□ -0.83
GARNL3-222ENST00000498801 SPINT1O43278 529 aa9.85□□□□□ -0.83
GARNL3-222ENST00000498801 IL13P35225 146 aa9.85□□□□□ -0.83
GARNL3-222ENST00000498801 SF3B2Q13435 895 aaKnown RBP9.85□□□□□ -0.83
GARNL3-222ENST00000498801 DDB1Q16531 1140 aa9.85□□□□□ -0.83
GARNL3-222ENST00000498801 SH3PXD2AQ5TCZ1 1133 aa9.85□□□□□ -0.83
GARNL3-222ENST00000498801 ZDHHC1Q8WTX9 485 aa9.85□□□□□ -0.83
GARNL3-222ENST00000498801 USP35Q9P2H5 1018 aa9.85□□□□□ -0.83
GARNL3-222ENST00000498801 SERTM1A2A2V5 107 aa9.84□□□□□ -0.83
GARNL3-222ENST00000498801 GPC1P35052 558 aa9.84□□□□□ -0.83
GARNL3-222ENST00000498801 FKBP4Q02790 459 aaKnown RBP eCLIP9.84□□□□□ -0.83
GARNL3-222ENST00000498801 TEAD4Q15561 434 aa9.84□□□□□ -0.83
GARNL3-222ENST00000498801 C16orf46Q6P387 395 aa9.84□□□□□ -0.83
GARNL3-222ENST00000498801 CFAP53Q96M91 514 aa9.84□□□□□ -0.83
GARNL3-222ENST00000498801 INSM2Q96T92 566 aaPredicted RBP9.84□□□□□ -0.83
GARNL3-222ENST00000498801 SAP130Q9H0E3 1048 aa9.84□□□□□ -0.83
GARNL3-222ENST00000498801 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.84□□□□□ -0.83
GARNL3-222ENST00000498801 SHANK3Q9BYB0 1731 aa9.84□□□□□ -0.83
GARNL3-222ENST00000498801 HIRAP54198 1017 aaPredicted RBP9.83□□□□□ -0.84
GARNL3-222ENST00000498801 FAM196AQ6ZSG2 479 aa9.83□□□□□ -0.84
GARNL3-222ENST00000498801 RHBDD1Q8TEB9 315 aa9.83□□□□□ -0.84
GARNL3-222ENST00000498801 LTV1Q96GA3 475 aaPredicted RBP9.83□□□□□ -0.84
GARNL3-222ENST00000498801 BRWD3Q6RI45 1802 aa9.83□□□□□ -0.84
GARNL3-222ENST00000498801 PCDH11XQ9BZA7 1347 aa9.82□□□□□ -0.84
GARNL3-222ENST00000498801 PCDH11YQ9BZA8 1340 aa9.82□□□□□ -0.84
GARNL3-222ENST00000498801 TNS1Q9HBL0 1735 aaKnown RBP9.82□□□□□ -0.84
GARNL3-222ENST00000498801 FAM187AA6NFU0 413 aa9.82□□□□□ -0.84
GARNL3-222ENST00000498801 DIAPH1O60610 1272 aaKnown RBP9.82□□□□□ -0.84
GARNL3-222ENST00000498801 UPP2O95045 317 aa9.82□□□□□ -0.84
GARNL3-222ENST00000498801 NOS2P35228 1153 aa9.82□□□□□ -0.84
GARNL3-222ENST00000498801 RNF144AP50876 292 aaPredicted RBP9.82□□□□□ -0.84
GARNL3-222ENST00000498801 ECM1Q16610 540 aa9.82□□□□□ -0.84
GARNL3-222ENST00000498801 SLC27A3Q5K4L6 730 aa9.82□□□□□ -0.84
GARNL3-222ENST00000498801 FOXD4L5Q5VV16 416 aaPredicted RBP9.82□□□□□ -0.84
GARNL3-222ENST00000498801 TMEM214Q6NUQ4 689 aaKnown RBP9.82□□□□□ -0.84
GARNL3-222ENST00000498801 MARCH10Q8NA82 808 aaPredicted RBP9.82□□□□□ -0.84
GARNL3-222ENST00000498801 FOXD4L4Q8WXT5 416 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms