RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 CGNQ9P2M7 1197 aaKnown RBP23.03■■□□□ 1.28
NKX2-1-202ENST00000498187 KIF20AO95235 890 aa23.03■■□□□ 1.28
NKX2-1-202ENST00000498187 ATL3Q6DD88 541 aa23.03■■□□□ 1.28
NKX2-1-202ENST00000498187 CARMIL3Q8ND23 1372 aa23.03■■□□□ 1.28
NKX2-1-202ENST00000498187 RBM6P78332 1123 aaKnown RBP23.02■■□□□ 1.28
NKX2-1-202ENST00000498187 CCDC57Q2TAC2 916 aa23.02■■□□□ 1.28
NKX2-1-202ENST00000498187 CEP135Q66GS9 1140 aa23.02■■□□□ 1.28
NKX2-1-202ENST00000498187 CCDC73Q6ZRK6 1079 aa23.02■■□□□ 1.28
NKX2-1-202ENST00000498187 C11orf57Q6ZUT1 292 aaPredicted RBP23.02■■□□□ 1.28
NKX2-1-202ENST00000498187 PRDM11Q9NQV5 511 aa23.02■■□□□ 1.28
NKX2-1-202ENST00000498187 BECN2A8MW95 431 aa23.02■■□□□ 1.28
NKX2-1-202ENST00000498187 ADORA1P30542 326 aa23.02■■□□□ 1.28
NKX2-1-202ENST00000498187 SNW1Q13573 536 aaKnown RBP23.02■■□□□ 1.28
NKX2-1-202ENST00000498187 CCDC158Q5M9N0 1113 aa23.02■■□□□ 1.28
NKX2-1-202ENST00000498187 TTC39AQ5SRH9 613 aa23.02■■□□□ 1.28
NKX2-1-202ENST00000498187 GORABQ5T7V8 394 aa23.02■■□□□ 1.28
NKX2-1-202ENST00000498187 BRINP3Q76B58 766 aa23.02■■□□□ 1.28
NKX2-1-202ENST00000498187 ILDR1Q86SU0 546 aaPredicted RBP23.02■■□□□ 1.28
NKX2-1-202ENST00000498187 NWD2Q9ULI1 1742 aa23.01■■□□□ 1.27
NKX2-1-202ENST00000498187 WASHC4Q2M389 1173 aa23■■□□□ 1.27
NKX2-1-202ENST00000498187 XAGE2Q96GT9 111 aa23■■□□□ 1.27
NKX2-1-202ENST00000498187 ISCA1Q9BUE6 129 aa23■■□□□ 1.27
NKX2-1-202ENST00000498187 GPHNQ9NQX3 736 aaPredicted RBP23■■□□□ 1.27
NKX2-1-202ENST00000498187 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23■■□□□ 1.27
NKX2-1-202ENST00000498187 FDPSP14324 419 aaKnown RBP23■■□□□ 1.27
NKX2-1-202ENST00000498187 HAND2P61296 217 aa23■■□□□ 1.27
NKX2-1-202ENST00000498187 NKX1-1Q15270 411 aaPredicted RBP23■■□□□ 1.27
NKX2-1-202ENST00000498187 CHMP4CQ96CF2 233 aa23■■□□□ 1.27
NKX2-1-202ENST00000498187 FOXP2O15409 715 aa22.99■■□□□ 1.27
NKX2-1-202ENST00000498187 KINO60870 393 aaKnown RBP22.99■■□□□ 1.27
NKX2-1-202ENST00000498187 ME1P48163 572 aa22.99■■□□□ 1.27
NKX2-1-202ENST00000498187 LRRFIP1Q32MZ4 808 aaKnown RBP22.99■■□□□ 1.27
NKX2-1-202ENST00000498187 ANO10Q9NW15 660 aa22.99■■□□□ 1.27
NKX2-1-202ENST00000498187 CTNNA3Q9UI47 895 aa22.99■■□□□ 1.27
NKX2-1-202ENST00000498187 ZNF330Q9Y3S2 320 aaPredicted RBP22.99■■□□□ 1.27
NKX2-1-202ENST00000498187 FAM160A1Q05DH4 1040 aa22.99■■□□□ 1.27
NKX2-1-202ENST00000498187 FBXL16Q8N461 479 aa22.99■■□□□ 1.27
NKX2-1-202ENST00000498187 ENGASEQ8NFI3 743 aa22.99■■□□□ 1.27
NKX2-1-202ENST00000498187 CCDC85AQ96PX6 553 aaPredicted RBP22.99■■□□□ 1.27
NKX2-1-202ENST00000498187 AKAP2Q9Y2D5 859 aa22.99■■□□□ 1.27
NKX2-1-202ENST00000498187 SOS2Q07890 1332 aaPredicted RBP22.99■■□□□ 1.27
NKX2-1-202ENST00000498187 EVCP57679 992 aa22.98■■□□□ 1.27
NKX2-1-202ENST00000498187 TCIRG1Q13488 830 aa22.98■■□□□ 1.27
NKX2-1-202ENST00000498187 FSIP1Q8NA03 581 aa22.98■■□□□ 1.27
NKX2-1-202ENST00000498187 TNS2Q63HR2 1409 aa22.98■■□□□ 1.27
NKX2-1-202ENST00000498187 SCARF1Q14162 830 aa22.98■■□□□ 1.27
NKX2-1-202ENST00000498187 IMMTQ16891 758 aaKnown RBP22.98■■□□□ 1.27
NKX2-1-202ENST00000498187 ZFYP08048 801 aaPredicted RBP22.97■■□□□ 1.27
NKX2-1-202ENST00000498187 SKILP12757 684 aa22.97■■□□□ 1.27
NKX2-1-202ENST00000498187 PTPN14Q15678 1187 aa22.97■■□□□ 1.27
NKX2-1-202ENST00000498187 ZNF592Q92610 1267 aa22.97■■□□□ 1.27
NKX2-1-202ENST00000498187 COL5A2P05997 1499 aaPredicted RBP22.97■■□□□ 1.27
NKX2-1-202ENST00000498187 IL2RBP14784 551 aa22.97■■□□□ 1.27
NKX2-1-202ENST00000498187 HSP90AB3PQ58FF7 597 aa22.97■■□□□ 1.27
NKX2-1-202ENST00000498187 SHANK3Q9BYB0 1731 aa22.97■■□□□ 1.27
NKX2-1-202ENST00000498187 FGAP02671 866 aa22.96■■□□□ 1.27
NKX2-1-202ENST00000498187 NAT10Q9H0A0 1025 aaKnown RBP22.96■■□□□ 1.27
NKX2-1-202ENST00000498187 FBXO3Q9UK99 471 aa22.96■■□□□ 1.27
NKX2-1-202ENST00000498187 A0A087WWV3 80 aa22.96■■□□□ 1.27
NKX2-1-202ENST00000498187 ZAP70P43403 619 aa22.96■■□□□ 1.27
NKX2-1-202ENST00000498187 TAF7LQ5H9L4 462 aa22.96■■□□□ 1.27
NKX2-1-202ENST00000498187 OTUD7BQ6GQQ9 843 aa22.96■■□□□ 1.27
NKX2-1-202ENST00000498187 CEP57L1Q8IYX8 460 aa22.96■■□□□ 1.27
NKX2-1-202ENST00000498187 FAM89AQ96GI7 184 aa22.96■■□□□ 1.27
NKX2-1-202ENST00000498187 PCDHA7Q9UN72 937 aa22.96■■□□□ 1.27
NKX2-1-202ENST00000498187 PRC1O43663 620 aa22.95■■□□□ 1.26
NKX2-1-202ENST00000498187 NYAP1Q6ZVC0 841 aa22.95■■□□□ 1.26
NKX2-1-202ENST00000498187 RTEL1Q9NZ71 1219 aa22.95■■□□□ 1.26
NKX2-1-202ENST00000498187 DHX40Q8IX18 779 aaKnown RBP22.94■■□□□ 1.26
NKX2-1-202ENST00000498187 MB21D2Q8IYB1 491 aaPredicted RBP22.94■■□□□ 1.26
NKX2-1-202ENST00000498187 APPBP2Q92624 585 aa22.94■■□□□ 1.26
NKX2-1-202ENST00000498187 PUS7LQ9H0K6 701 aaKnown RBP22.94■■□□□ 1.26
NKX2-1-202ENST00000498187 KLF18A0A0U1RQI7 1052 aa22.94■■□□□ 1.26
NKX2-1-202ENST00000498187 CCDC69A6NI79 296 aa22.94■■□□□ 1.26
NKX2-1-202ENST00000498187 PI16Q6UXB8 463 aa22.94■■□□□ 1.26
NKX2-1-202ENST00000498187 MRPS27Q92552 414 aaKnown RBP22.94■■□□□ 1.26
NKX2-1-202ENST00000498187 DDX41Q9UJV9 622 aaKnown RBP22.94■■□□□ 1.26
NKX2-1-202ENST00000498187 MYH7P12883 1935 aa22.94■■□□□ 1.26
NKX2-1-202ENST00000498187 PCCAP05165 728 aaPredicted RBP22.93■■□□□ 1.26
NKX2-1-202ENST00000498187 GSDMDP57764 484 aa22.93■■□□□ 1.26
NKX2-1-202ENST00000498187 ERCC4Q92889 916 aaPredicted RBP22.93■■□□□ 1.26
NKX2-1-202ENST00000498187 C8orf76Q96K31 380 aa22.93■■□□□ 1.26
NKX2-1-202ENST00000498187 KCND1Q9NSA2 647 aa22.93■■□□□ 1.26
NKX2-1-202ENST00000498187 GOLGA8BA8MQT2 603 aa22.93■■□□□ 1.26
NKX2-1-202ENST00000498187 IFIT5Q13325 482 aaKnown RBP22.93■■□□□ 1.26
NKX2-1-202ENST00000498187 ARID5BQ14865 1188 aa22.93■■□□□ 1.26
NKX2-1-202ENST00000498187 FILIP1Q7Z7B0 1213 aa22.93■■□□□ 1.26
NKX2-1-202ENST00000498187 FMR1NBQ8N0W7 255 aaPredicted RBP22.93■■□□□ 1.26
NKX2-1-202ENST00000498187 HPS5Q9UPZ3 1129 aa22.93■■□□□ 1.26
NKX2-1-202ENST00000498187 ANTXR2P58335 489 aa22.92■■□□□ 1.26
NKX2-1-202ENST00000498187 TRIM28Q13263 835 aaKnown RBP22.92■■□□□ 1.26
NKX2-1-202ENST00000498187 ADALQ6DHV7 355 aa22.92■■□□□ 1.26
NKX2-1-202ENST00000498187 DDX60Q8IY21 1712 aaKnown RBP22.92■■□□□ 1.26
NKX2-1-202ENST00000498187 USP27XA6NNY8 438 aa22.92■■□□□ 1.26
NKX2-1-202ENST00000498187 KIF2AO00139 706 aaPredicted RBP22.92■■□□□ 1.26
NKX2-1-202ENST00000498187 DHX16O60231 1041 aaKnown RBP22.92■■□□□ 1.26
NKX2-1-202ENST00000498187 CCZ1BP86790 482 aa22.92■■□□□ 1.26
NKX2-1-202ENST00000498187 CCZ1P86791 482 aaPredicted RBP22.92■■□□□ 1.26
NKX2-1-202ENST00000498187 RAB11FIP4Q86YS3 637 aa22.92■■□□□ 1.26
NKX2-1-202ENST00000498187 NCOA7Q8NI08 942 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms