RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 RSBN1LQ6PCB5 846 aaPredicted RBP17.73■□□□□ 0.43
USP11-212ENST00000497179 FRAT2O75474 233 aaPredicted RBP17.72■□□□□ 0.43
USP11-212ENST00000497179 RPS12P25398 132 aaKnown RBP17.72■□□□□ 0.43
USP11-212ENST00000497179 FKBP1AP62942 108 aaKnown RBP17.72■□□□□ 0.43
USP11-212ENST00000497179 RASGRF1Q13972 1273 aa17.72■□□□□ 0.43
USP11-212ENST00000497179 CCDC158Q5M9N0 1113 aa17.72■□□□□ 0.43
USP11-212ENST00000497179 ANKRD45Q5TZF3 282 aa17.72■□□□□ 0.43
USP11-212ENST00000497179 FBXW7Q969H0 707 aa17.72■□□□□ 0.43
USP11-212ENST00000497179 ZNF512BQ96KM6 892 aaPredicted RBP17.72■□□□□ 0.43
USP11-212ENST00000497179 DENND2AQ9ULE3 1009 aa17.72■□□□□ 0.43
USP11-212ENST00000497179 MYO3BQ8WXR4 1341 aa17.72■□□□□ 0.43
USP11-212ENST00000497179 GMPSP49915 693 aaPredicted RBP17.71■□□□□ 0.43
USP11-212ENST00000497179 CHAF1AQ13111 956 aaPredicted RBP17.71■□□□□ 0.43
USP11-212ENST00000497179 TTC39AQ5SRH9 613 aa17.71■□□□□ 0.43
USP11-212ENST00000497179 GMLQ99445 158 aa17.71■□□□□ 0.43
USP11-212ENST00000497179 JAG2Q9Y219 1238 aa17.71■□□□□ 0.43
USP11-212ENST00000497179 SCNN1DP51172 638 aa17.7■□□□□ 0.42
USP11-212ENST00000497179 NUCB1Q02818 461 aa17.7■□□□□ 0.42
USP11-212ENST00000497179 CERS5Q8N5B7 392 aa17.7■□□□□ 0.42
USP11-212ENST00000497179 AGBL3Q8NEM8 1001 aa17.7■□□□□ 0.42
USP11-212ENST00000497179 DPF2Q92785 391 aa17.7■□□□□ 0.42
USP11-212ENST00000497179 MXD3Q9BW11 206 aa17.7■□□□□ 0.42
USP11-212ENST00000497179 BCL11AQ9H165 835 aa17.7■□□□□ 0.42
USP11-212ENST00000497179 ZBTB47Q9UFB7 747 aaPredicted RBP17.7■□□□□ 0.42
USP11-212ENST00000497179 ZBTB12Q9Y330 459 aaPredicted RBP17.7■□□□□ 0.42
USP11-212ENST00000497179 MCAMP43121 646 aa17.69■□□□□ 0.42
USP11-212ENST00000497179 SCARF1Q14162 830 aa17.69■□□□□ 0.42
USP11-212ENST00000497179 B4GALNT3Q6L9W6 998 aa17.69■□□□□ 0.42
USP11-212ENST00000497179 WDR66Q8TBY9 1149 aa17.69■□□□□ 0.42
USP11-212ENST00000497179 ZNF526Q8TF50 670 aaPredicted RBP17.69■□□□□ 0.42
USP11-212ENST00000497179 TBC1D22AQ8WUA7 517 aa17.69■□□□□ 0.42
USP11-212ENST00000497179 HMG20BQ9P0W2 317 aa17.69■□□□□ 0.42
USP11-212ENST00000497179 SCN4AP35499 1836 aa17.69■□□□□ 0.42
USP11-212ENST00000497179 SALL1Q9NSC2 1324 aa17.69■□□□□ 0.42
USP11-212ENST00000497179 MFSD14BQ5SR56 506 aa17.68■□□□□ 0.42
USP11-212ENST00000497179 CHD1LQ86WJ1 897 aa17.68■□□□□ 0.42
USP11-212ENST00000497179 SPATA5Q8NB90 893 aa17.68■□□□□ 0.42
USP11-212ENST00000497179 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.68■□□□□ 0.42
USP11-212ENST00000497179 GPRC5DQ9NZD1 345 aa17.68■□□□□ 0.42
USP11-212ENST00000497179 AKAP11Q9UKA4 1901 aa17.68■□□□□ 0.42
USP11-212ENST00000497179 SALL3Q9BXA9 1300 aa17.68■□□□□ 0.42
USP11-212ENST00000497179 IQCA1LA6NCM1 817 aa17.67■□□□□ 0.42
USP11-212ENST00000497179 POTECB2RU33 542 aa17.67■□□□□ 0.42
USP11-212ENST00000497179 LMOD1P29536 600 aaPredicted RBP17.67■□□□□ 0.42
USP11-212ENST00000497179 PI16Q6UXB8 463 aa17.67■□□□□ 0.42
USP11-212ENST00000497179 GPATCH3Q96I76 525 aa17.67■□□□□ 0.42
USP11-212ENST00000497179 LNPKQ9C0E8 428 aa17.67■□□□□ 0.42
USP11-212ENST00000497179 ATP5JP18859 108 aa17.66■□□□□ 0.42
USP11-212ENST00000497179 CENPQQ7L2Z9 268 aaPredicted RBP17.66■□□□□ 0.42
USP11-212ENST00000497179 C16orf71Q8IYS4 520 aaPredicted RBP17.66■□□□□ 0.42
USP11-212ENST00000497179 ZNF784Q8NCA9 323 aaPredicted RBP17.66■□□□□ 0.42
USP11-212ENST00000497179 OTUD7AQ8TE49 926 aaPredicted RBP17.66■□□□□ 0.42
USP11-212ENST00000497179 CCDC136Q96JN2 1154 aa17.66■□□□□ 0.42
USP11-212ENST00000497179 GPBP1L1Q9HC44 474 aaPredicted RBP17.66■□□□□ 0.42
USP11-212ENST00000497179 NMRK2Q9NPI5 230 aa17.66■□□□□ 0.42
USP11-212ENST00000497179 ECHDC1Q9NTX5 307 aa17.66■□□□□ 0.42
USP11-212ENST00000497179 HACL1Q9UJ83 578 aa17.66■□□□□ 0.42
USP11-212ENST00000497179 SUGT1Q9Y2Z0 365 aa17.66■□□□□ 0.42
USP11-212ENST00000497179 USP17L8P0C7I0 530 aa17.65■□□□□ 0.42
USP11-212ENST00000497179 MMP14P50281 582 aa17.65■□□□□ 0.42
USP11-212ENST00000497179 ZNF280AP59817 542 aaPredicted RBP17.65■□□□□ 0.42
USP11-212ENST00000497179 KIAA0825Q8IV33 1275 aa17.65■□□□□ 0.42
USP11-212ENST00000497179 MICALL2Q8IY33 904 aa17.65■□□□□ 0.42
USP11-212ENST00000497179 ZGPATQ8N5A5 531 aaKnown RBP17.65■□□□□ 0.42
USP11-212ENST00000497179 RRAGCQ9HB90 399 aa17.65■□□□□ 0.42
USP11-212ENST00000497179 PPP4R2Q9NY27 417 aa17.65■□□□□ 0.42
USP11-212ENST00000497179 CNOT7Q9UIV1 285 aaKnown RBP17.65■□□□□ 0.42
USP11-212ENST00000497179 TTC41PQ6P2S7 1318 aa17.65■□□□□ 0.42
USP11-212ENST00000497179 SHTN1A0MZ66 631 aa17.64■□□□□ 0.41
USP11-212ENST00000497179 VEGFAP15692 232 aaPredicted RBP17.64■□□□□ 0.41
USP11-212ENST00000497179 MX1P20591 662 aa17.64■□□□□ 0.41
USP11-212ENST00000497179 EPS15P42566 896 aa17.64■□□□□ 0.41
USP11-212ENST00000497179 GRIK5Q16478 980 aa17.64■□□□□ 0.41
USP11-212ENST00000497179 TAF1DQ9H5J8 278 aaPredicted RBP17.64■□□□□ 0.41
USP11-212ENST00000497179 SNRKQ9NRH2 765 aa17.64■□□□□ 0.41
USP11-212ENST00000497179 ADARB2Q9NS39 739 aaKnown RBP17.64■□□□□ 0.41
USP11-212ENST00000497179 MAST2Q6P0Q8 1798 aa17.63■□□□□ 0.41
USP11-212ENST00000497179 H7C1D1 291 aa17.63■□□□□ 0.41
USP11-212ENST00000497179 CYP2E1P05181 493 aaPredicted RBP17.63■□□□□ 0.41
USP11-212ENST00000497179 EPHX2P34913 555 aa17.63■□□□□ 0.41
USP11-212ENST00000497179 ZAP70P43403 619 aa17.63■□□□□ 0.41
USP11-212ENST00000497179 STAP2Q9UGK3 403 aa17.63■□□□□ 0.41
USP11-212ENST00000497179 HDAC9Q9UKV0 1011 aa17.63■□□□□ 0.41
USP11-212ENST00000497179 ADAMTSL1Q8N6G6 1762 aa17.62■□□□□ 0.41
USP11-212ENST00000497179 PRDX5P30044 214 aa17.62■□□□□ 0.41
USP11-212ENST00000497179 TSHZ3Q63HK5 1081 aa17.62■□□□□ 0.41
USP11-212ENST00000497179 OGFOD1Q8N543 542 aa17.62■□□□□ 0.41
USP11-212ENST00000497179 HAUS7Q99871 368 aa17.62■□□□□ 0.41
USP11-212ENST00000497179 TTF2Q9UNY4 1162 aaKnown RBP17.62■□□□□ 0.41
USP11-212ENST00000497179 DOCK2Q92608 1830 aa17.62■□□□□ 0.41
USP11-212ENST00000497179 MAST3O60307 1309 aa17.62■□□□□ 0.41
USP11-212ENST00000497179 F8W031 263 aaPredicted RBP17.61■□□□□ 0.41
USP11-212ENST00000497179 LDHBP07195 334 aaKnown RBP17.61■□□□□ 0.41
USP11-212ENST00000497179 PDE1AP54750 535 aa17.61■□□□□ 0.41
USP11-212ENST00000497179 SPTY2D1Q68D10 685 aaPredicted RBP17.61■□□□□ 0.41
USP11-212ENST00000497179 PI4K2BQ8TCG2 481 aa17.61■□□□□ 0.41
USP11-212ENST00000497179 BOLA2Q9H3K6 86 aa17.61■□□□□ 0.41
USP11-212ENST00000497179 MYOZ2Q9NPC6 264 aa17.61■□□□□ 0.41
USP11-212ENST00000497179 ABCF2Q9UG63 623 aa17.61■□□□□ 0.41
USP11-212ENST00000497179 NDUFB9Q9Y6M9 179 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms