RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 SLC4A3P48751 1232 aa20.32■□□□□ 0.84
LMNA-216ENST00000496738 SLC9C2Q5TAH2 1124 aa20.32■□□□□ 0.84
LMNA-216ENST00000496738 MAST3O60307 1309 aa20.32■□□□□ 0.84
LMNA-216ENST00000496738 CCDC171Q6TFL3 1326 aa20.32■□□□□ 0.84
LMNA-216ENST00000496738 CHAF1AQ13111 956 aaPredicted RBP20.32■□□□□ 0.84
LMNA-216ENST00000496738 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.32■□□□□ 0.842e-7■■■□□ 17.1
LMNA-216ENST00000496738 MTFR1LQ9H019 292 aa20.32■□□□□ 0.84
LMNA-216ENST00000496738 ABCF2Q9UG63 623 aa20.32■□□□□ 0.84
LMNA-216ENST00000496738 LTBP1Q14766 1721 aa20.31■□□□□ 0.84
LMNA-216ENST00000496738 OSBP2Q969R2 916 aa20.31■□□□□ 0.84
LMNA-216ENST00000496738 DDRGK1Q96HY6 314 aa20.31■□□□□ 0.84
LMNA-216ENST00000496738 SLX4Q8IY92 1834 aa20.31■□□□□ 0.84
LMNA-216ENST00000496738 MCCP23508 829 aa20.31■□□□□ 0.84
LMNA-216ENST00000496738 MYH7P12883 1935 aa20.3■□□□□ 0.84
LMNA-216ENST00000496738 A0A0G2JLW4 131 aa20.3■□□□□ 0.84
LMNA-216ENST00000496738 MPNDQ8N594 471 aa20.3■□□□□ 0.84
LMNA-216ENST00000496738 HELLSQ9NRZ9 838 aa20.3■□□□□ 0.84
LMNA-216ENST00000496738 DENND2AQ9ULE3 1009 aa20.3■□□□□ 0.84
LMNA-216ENST00000496738 RIMBP2O15034 1052 aa20.29■□□□□ 0.84
LMNA-216ENST00000496738 PDE6AP16499 860 aa20.29■□□□□ 0.84
LMNA-216ENST00000496738 ADD2P35612 726 aa20.29■□□□□ 0.84
LMNA-216ENST00000496738 LRRFIP1Q32MZ4 808 aaKnown RBP20.29■□□□□ 0.84
LMNA-216ENST00000496738 LRP2BPQ9P2M1 347 aa20.29■□□□□ 0.84
LMNA-216ENST00000496738 ZNF532Q9HCE3 1301 aa20.29■□□□□ 0.84
LMNA-216ENST00000496738 MYH13Q9UKX3 1938 aa20.29■□□□□ 0.84
LMNA-216ENST00000496738 ZFYP08048 801 aaPredicted RBP20.29■□□□□ 0.84
LMNA-216ENST00000496738 POLD1P28340 1107 aa20.29■□□□□ 0.84
LMNA-216ENST00000496738 DPP8Q6V1X1 898 aaPredicted RBP20.29■□□□□ 0.84
LMNA-216ENST00000496738 ZNF804AQ7Z570 1209 aa20.29■□□□□ 0.84
LMNA-216ENST00000496738 MAGEB6Q8N7X4 407 aa20.29■□□□□ 0.84
LMNA-216ENST00000496738 PUS7LQ9H0K6 701 aaKnown RBP20.29■□□□□ 0.84
LMNA-216ENST00000496738 TMX4Q9H1E5 349 aaPredicted RBP20.29■□□□□ 0.84
LMNA-216ENST00000496738 DUOX1Q9NRD9 1551 aa20.29■□□□□ 0.84
LMNA-216ENST00000496738 DOCK2Q92608 1830 aa20.29■□□□□ 0.84
LMNA-216ENST00000496738 HSPA4P34932 840 aa20.28■□□□□ 0.84
LMNA-216ENST00000496738 VPS53Q5VIR6 699 aa20.28■□□□□ 0.84
LMNA-216ENST00000496738 CNKSR1Q969H4 720 aa20.28■□□□□ 0.84
LMNA-216ENST00000496738 PPP1R1BQ9UD71 204 aaPredicted RBP20.28■□□□□ 0.84
LMNA-216ENST00000496738 DPEP1P16444 411 aa20.28■□□□□ 0.84
LMNA-216ENST00000496738 MAP3K12Q12852 859 aa20.28■□□□□ 0.84
LMNA-216ENST00000496738 ZSCAN25Q6NSZ9 544 aa20.28■□□□□ 0.84
LMNA-216ENST00000496738 KLHL34Q8N239 644 aa20.28■□□□□ 0.84
LMNA-216ENST00000496738 APPBP2Q92624 585 aa20.28■□□□□ 0.84
LMNA-216ENST00000496738 RBM8AQ9Y5S9 174 aaKnown RBP20.28■□□□□ 0.84
LMNA-216ENST00000496738 RAI14Q9P0K7 980 aa20.27■□□□□ 0.84
LMNA-216ENST00000496738 SEMA3EO15041 775 aa20.26■□□□□ 0.83
LMNA-216ENST00000496738 C15orf52Q6ZUT6 534 aaKnown RBP20.26■□□□□ 0.83
LMNA-216ENST00000496738 MAP4K1Q92918 833 aa20.26■□□□□ 0.83
LMNA-216ENST00000496738 TCRBV5S4A2TA0A5A2 114 aa20.25■□□□□ 0.83
LMNA-216ENST00000496738 TICAM2Q86XR7 235 aa20.25■□□□□ 0.83
LMNA-216ENST00000496738 RASEFQ8IZ41 740 aa20.25■□□□□ 0.83
LMNA-216ENST00000496738 CD209Q9NNX6 404 aa20.25■□□□□ 0.83
LMNA-216ENST00000496738 C21orf2O43822 256 aa20.25■□□□□ 0.83
LMNA-216ENST00000496738 UBE3CQ15386 1083 aa20.25■□□□□ 0.83
LMNA-216ENST00000496738 ILDR2Q71H61 639 aa20.25■□□□□ 0.83
LMNA-216ENST00000496738 TDRD7Q8NHU6 1098 aaKnown RBP20.25■□□□□ 0.83
LMNA-216ENST00000496738 DLEC1Q9Y238 1755 aa20.25■□□□□ 0.83
LMNA-216ENST00000496738 EPB41L2O43491 1005 aaKnown RBP20.24■□□□□ 0.83
LMNA-216ENST00000496738 SNX14Q9Y5W7 946 aa20.24■□□□□ 0.83
LMNA-216ENST00000496738 GPAA1O43292 621 aa20.24■□□□□ 0.83
LMNA-216ENST00000496738 CD2BP2O95400 341 aaKnown RBP20.24■□□□□ 0.83
LMNA-216ENST00000496738 KCNA3P22001 575 aa20.24■□□□□ 0.83
LMNA-216ENST00000496738 TBC1D2Q9BYX2 928 aa20.24■□□□□ 0.83
LMNA-216ENST00000496738 KIF13BQ9NQT8 1826 aa20.23■□□□□ 0.83
LMNA-216ENST00000496738 NECTIN1Q15223 517 aa20.23■□□□□ 0.83
LMNA-216ENST00000496738 HSPD1P10809 573 aaKnown RBP20.23■□□□□ 0.83
LMNA-216ENST00000496738 PRDX5P30044 214 aa20.23■□□□□ 0.83
LMNA-216ENST00000496738 RABEP1Q15276 862 aa20.23■□□□□ 0.83
LMNA-216ENST00000496738 DOK7Q18PE1 504 aa20.23■□□□□ 0.83
LMNA-216ENST00000496738 CREB3L3Q68CJ9 461 aa20.23■□□□□ 0.83
LMNA-216ENST00000496738 ADGRA1Q86SQ6 560 aa20.23■□□□□ 0.83
LMNA-216ENST00000496738 TTLL6Q8N841 843 aa20.23■□□□□ 0.83
LMNA-216ENST00000496738 ZC3H12CQ9C0D7 883 aaKnown RBP20.23■□□□□ 0.83
LMNA-216ENST00000496738 MIGA1Q8NAN2 632 aa20.22■□□□□ 0.83
LMNA-216ENST00000496738 C7orf43Q8WVR3 580 aa20.22■□□□□ 0.83
LMNA-216ENST00000496738 TAF6LQ9Y6J9 622 aa20.22■□□□□ 0.83
LMNA-216ENST00000496738 SLC27A2O14975 620 aa20.22■□□□□ 0.83
LMNA-216ENST00000496738 CYP7A1P22680 504 aa20.22■□□□□ 0.83
LMNA-216ENST00000496738 PDS5AQ29RF7 1337 aaKnown RBP20.21■□□□□ 0.83
LMNA-216ENST00000496738 BECN1Q14457 450 aa20.21■□□□□ 0.83
LMNA-216ENST00000496738 AIDAQ96BJ3 306 aa20.21■□□□□ 0.83
LMNA-216ENST00000496738 SGIP1Q9BQI5 828 aa20.21■□□□□ 0.83
LMNA-216ENST00000496738 UPF3BQ9BZI7 483 aaKnown RBP20.21■□□□□ 0.83
LMNA-216ENST00000496738 FOXP2O15409 715 aa20.21■□□□□ 0.83
LMNA-216ENST00000496738 MBD4O95243 580 aa20.21■□□□□ 0.83
LMNA-216ENST00000496738 IL1R1P14778 569 aa20.21■□□□□ 0.83
LMNA-216ENST00000496738 ANAPC15P60006 121 aa20.21■□□□□ 0.83
LMNA-216ENST00000496738 ZNF384Q8TF68 577 aa20.21■□□□□ 0.83
LMNA-216ENST00000496738 FBXW7Q969H0 707 aa20.21■□□□□ 0.83
LMNA-216ENST00000496738 ARMT1Q9H993 441 aa20.21■□□□□ 0.83
LMNA-216ENST00000496738 MECOMQ03112 1051 aa20.2■□□□□ 0.82
LMNA-216ENST00000496738 GRIK5Q16478 980 aa20.2■□□□□ 0.82
LMNA-216ENST00000496738 ADCK5Q3MIX3 580 aa20.2■□□□□ 0.82
LMNA-216ENST00000496738 GLIPR1L2Q4G1C9 344 aa20.2■□□□□ 0.82
LMNA-216ENST00000496738 KIAA1551Q9HCM1 1747 aa20.2■□□□□ 0.82
LMNA-216ENST00000496738 PTGER2P43116 358 aa20.19■□□□□ 0.82
LMNA-216ENST00000496738 DSCC1Q9BVC3 393 aa20.19■□□□□ 0.82
LMNA-216ENST00000496738 U3KPZ7 1027 aaPredicted RBP20.19■□□□□ 0.82
LMNA-216ENST00000496738 G3V3G9 751 aa20.19■□□□□ 0.82
LMNA-216ENST00000496738 NEK4P51957 841 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms