RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 ZNF589Q86UQ0 364 aaPredicted RBP25.21■■□□□ 1.63
FGFR1-223ENST00000496296 PARP3Q9Y6F1 533 aa25.21■■□□□ 1.63
FGFR1-223ENST00000496296 DDX49Q9Y6V7 483 aaKnown RBP25.21■■□□□ 1.63
FGFR1-223ENST00000496296 TSGA10IPQ3SY00 556 aa25.21■■□□□ 1.63
FGFR1-223ENST00000496296 PRPF40BQ6NWY9 871 aaKnown RBP25.21■■□□□ 1.63
FGFR1-223ENST00000496296 ALDH8A1Q9H2A2 487 aaPredicted RBP25.21■■□□□ 1.63
FGFR1-223ENST00000496296 HMG20BQ9P0W2 317 aa25.21■■□□□ 1.63
FGFR1-223ENST00000496296 ZKSCAN1P17029 563 aaPredicted RBP25.2■■□□□ 1.62
FGFR1-223ENST00000496296 RNF20Q5VTR2 975 aa25.2■■□□□ 1.62
FGFR1-223ENST00000496296 CREB3L3Q68CJ9 461 aa25.2■■□□□ 1.62
FGFR1-223ENST00000496296 ZSCAN31Q96LW9 406 aaPredicted RBP25.2■■□□□ 1.62
FGFR1-223ENST00000496296 A0A1B0GUL6 1792 aa25.2■■□□□ 1.62
FGFR1-223ENST00000496296 CASTP20810 708 aaKnown RBP25.19■■□□□ 1.62
FGFR1-223ENST00000496296 RASGRF1Q13972 1273 aa25.19■■□□□ 1.62
FGFR1-223ENST00000496296 VPS37DQ86XT2 251 aa25.19■■□□□ 1.62
FGFR1-223ENST00000496296 SEC62Q99442 399 aaKnown RBP25.19■■□□□ 1.62
FGFR1-223ENST00000496296 BRIP1Q9BX63 1249 aa25.19■■□□□ 1.62
FGFR1-223ENST00000496296 GRPEL1Q9HAV7 217 aa25.19■■□□□ 1.62
FGFR1-223ENST00000496296 CYP46A1Q9Y6A2 500 aa25.19■■□□□ 1.62
FGFR1-223ENST00000496296 AKAP11Q9UKA4 1901 aa25.19■■□□□ 1.62
FGFR1-223ENST00000496296 KLRG2A4D1S0 409 aaPredicted RBP25.18■■□□□ 1.62
FGFR1-223ENST00000496296 MMP10P09238 476 aa25.18■■□□□ 1.62
FGFR1-223ENST00000496296 WASHC4Q2M389 1173 aa25.18■■□□□ 1.62
FGFR1-223ENST00000496296 SH2B1Q9NRF2 756 aaPredicted RBP25.18■■□□□ 1.62
FGFR1-223ENST00000496296 WDR33Q9C0J8 1336 aaKnown RBP25.18■■□□□ 1.62
FGFR1-223ENST00000496296 CHGBP05060 677 aa25.17■■□□□ 1.62
FGFR1-223ENST00000496296 ADCK5Q3MIX3 580 aa25.17■■□□□ 1.62
FGFR1-223ENST00000496296 JAKMIP1Q96N16 626 aaKnown RBP25.17■■□□□ 1.62
FGFR1-223ENST00000496296 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.17■■□□□ 1.62
FGFR1-223ENST00000496296 SLC27A2O14975 620 aa25.17■■□□□ 1.62
FGFR1-223ENST00000496296 PSMA5P28066 241 aa25.17■■□□□ 1.62
FGFR1-223ENST00000496296 HOXA10P31260 410 aaPredicted RBP25.17■■□□□ 1.62
FGFR1-223ENST00000496296 ZNF445P59923 1031 aa25.17■■□□□ 1.62
FGFR1-223ENST00000496296 NOL8Q76FK4 1167 aaKnown RBP25.17■■□□□ 1.62
FGFR1-223ENST00000496296 APPBP2Q92624 585 aa25.17■■□□□ 1.62
FGFR1-223ENST00000496296 PDRG1Q9NUG6 133 aa25.17■■□□□ 1.62
FGFR1-223ENST00000496296 ANKIB1Q9P2G1 1089 aa25.17■■□□□ 1.62
FGFR1-223ENST00000496296 U3KPZ7 1027 aaPredicted RBP25.17■■□□□ 1.62
FGFR1-223ENST00000496296 ZNF804BA4D1E1 1349 aa25.17■■□□□ 1.62
FGFR1-223ENST00000496296 IDH1O75874 414 aaKnown RBP25.16■■□□□ 1.62
FGFR1-223ENST00000496296 BBOX1O75936 387 aa25.16■■□□□ 1.62
FGFR1-223ENST00000496296 GYG1P46976 350 aa25.16■■□□□ 1.62
FGFR1-223ENST00000496296 CCDC129Q6ZRS4 1044 aa25.16■■□□□ 1.62
FGFR1-223ENST00000496296 CRAMP1Q96RY5 1269 aa25.16■■□□□ 1.62
FGFR1-223ENST00000496296 PIH1D3Q9NQM4 214 aaKnown RBP25.16■■□□□ 1.62
FGFR1-223ENST00000496296 SLC9C2Q5TAH2 1124 aa25.15■■□□□ 1.62
FGFR1-223ENST00000496296 LEMD3Q9Y2U8 911 aa25.15■■□□□ 1.62
FGFR1-223ENST00000496296 MAST3O60307 1309 aa25.15■■□□□ 1.62
FGFR1-223ENST00000496296 PDE6BP35913 854 aa25.15■■□□□ 1.62
FGFR1-223ENST00000496296 MAP3K12Q12852 859 aa25.15■■□□□ 1.62
FGFR1-223ENST00000496296 GAS2L3Q86XJ1 694 aa25.15■■□□□ 1.62
FGFR1-223ENST00000496296 NRXN2Q9P2S2 1712 aa25.14■■□□□ 1.62
FGFR1-223ENST00000496296 XDHP47989 1333 aa25.14■■□□□ 1.62
FGFR1-223ENST00000496296 ADD2P35612 726 aa25.14■■□□□ 1.61
FGFR1-223ENST00000496296 UBE3CQ15386 1083 aa25.14■■□□□ 1.61
FGFR1-223ENST00000496296 MSL1Q68DK7 614 aa25.14■■□□□ 1.61
FGFR1-223ENST00000496296 FAM84BQ96KN1 310 aaPredicted RBP25.14■■□□□ 1.61
FGFR1-223ENST00000496296 DSCC1Q9BVC3 393 aa25.14■■□□□ 1.61
FGFR1-223ENST00000496296 SEMA3EO15041 775 aa25.13■■□□□ 1.61
FGFR1-223ENST00000496296 SLFNL1Q499Z3 407 aa25.13■■□□□ 1.61
FGFR1-223ENST00000496296 TMC4Q7Z404 712 aa25.13■■□□□ 1.61
FGFR1-223ENST00000496296 OSBP2Q969R2 916 aa25.13■■□□□ 1.61
FGFR1-223ENST00000496296 DENND2AQ9ULE3 1009 aa25.13■■□□□ 1.61
FGFR1-223ENST00000496296 PDGFDQ9GZP0 370 aaPredicted RBP25.13■■□□□ 1.61
FGFR1-223ENST00000496296 M0R2C6 588 aa25.12■■□□□ 1.61
FGFR1-223ENST00000496296 PRPF40AO75400 957 aaKnown RBP25.12■■□□□ 1.61
FGFR1-223ENST00000496296 HIBADHP31937 336 aaKnown RBP25.12■■□□□ 1.61
FGFR1-223ENST00000496296 FBXO33Q7Z6M2 555 aa25.12■■□□□ 1.61
FGFR1-223ENST00000496296 WTIPA6NIX2 430 aaPredicted RBP25.11■■□□□ 1.61
FGFR1-223ENST00000496296 MBD3O95983 291 aa25.11■■□□□ 1.61
FGFR1-223ENST00000496296 FAM43AQ8N2R8 423 aa25.11■■□□□ 1.61
FGFR1-223ENST00000496296 GPT2Q8TD30 523 aa25.11■■□□□ 1.61
FGFR1-223ENST00000496296 QSER1Q2KHR3 1735 aa25.11■■□□□ 1.61
FGFR1-223ENST00000496296 MYH7P12883 1935 aa25.1■■□□□ 1.61
FGFR1-223ENST00000496296 PDIA4P13667 645 aaKnown RBP25.1■■□□□ 1.61
FGFR1-223ENST00000496296 CPA1P15085 419 aa25.1■■□□□ 1.61
FGFR1-223ENST00000496296 NPR1P16066 1061 aa25.1■■□□□ 1.61
FGFR1-223ENST00000496296 PDE6AP16499 860 aa25.1■■□□□ 1.61
FGFR1-223ENST00000496296 KRT32Q14532 448 aa25.1■■□□□ 1.61
FGFR1-223ENST00000496296 ANKRD1Q15327 319 aa25.1■■□□□ 1.61
FGFR1-223ENST00000496296 TMEM87AQ8NBN3 555 aa25.1■■□□□ 1.61
FGFR1-223ENST00000496296 LRP2BPQ9P2M1 347 aa25.1■■□□□ 1.61
FGFR1-223ENST00000496296 IQSEC3Q9UPP2 1182 aaPredicted RBP25.1■■□□□ 1.61
FGFR1-223ENST00000496296 HSPD1P10809 573 aaKnown RBP25.09■■□□□ 1.61
FGFR1-223ENST00000496296 ZNF532Q9HCE3 1301 aa25.09■■□□□ 1.61
FGFR1-223ENST00000496296 LARGE1O95461 756 aa25.09■■□□□ 1.61
FGFR1-223ENST00000496296 ATP2B4P23634 1241 aa25.09■■□□□ 1.61
FGFR1-223ENST00000496296 PUS7LQ9H0K6 701 aaKnown RBP25.09■■□□□ 1.61
FGFR1-223ENST00000496296 SMC3Q9UQE7 1217 aa25.09■■□□□ 1.61
FGFR1-223ENST00000496296 TCHHQ07283 1943 aa25.08■■□□□ 1.61
FGFR1-223ENST00000496296 SRGNP10124 158 aa25.08■■□□□ 1.61
FGFR1-223ENST00000496296 RPS6KB1P23443 525 aa25.08■■□□□ 1.61
FGFR1-223ENST00000496296 ALDH1B1P30837 517 aa25.08■■□□□ 1.61
FGFR1-223ENST00000496296 WWC3Q9ULE0 1092 aa25.08■■□□□ 1.61
FGFR1-223ENST00000496296 NSFL1CQ9UNZ2 370 aaKnown RBP25.08■■□□□ 1.61
FGFR1-223ENST00000496296 PDS5AQ29RF7 1337 aaKnown RBP25.07■■□□□ 1.6
FGFR1-223ENST00000496296 PPEF1O14829 653 aaPredicted RBP25.07■■□□□ 1.6
FGFR1-223ENST00000496296 ZSCAN22P10073 491 aaPredicted RBP25.07■■□□□ 1.6
FGFR1-223ENST00000496296 KLRK1P26718 216 aa25.07■■□□□ 1.6
FGFR1-223ENST00000496296 BLOC1S2Q6QNY1 142 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms