RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 SPATA32Q96LK8 384 aa17.42■□□□□ 0.38
CHTOP-206ENST00000495554 FUCA2Q9BTY2 467 aa17.42■□□□□ 0.38
CHTOP-206ENST00000495554 KIF3AQ9Y496 699 aa17.42■□□□□ 0.38
CHTOP-206ENST00000495554 CICQ96RK0 1608 aaPredicted RBP17.42■□□□□ 0.38
CHTOP-206ENST00000495554 UBAP1LF5GYI3 381 aa17.42■□□□□ 0.38
CHTOP-206ENST00000495554 MCM5P33992 734 aa17.42■□□□□ 0.38
CHTOP-206ENST00000495554 MCAMP43121 646 aa17.42■□□□□ 0.38
CHTOP-206ENST00000495554 HMGN5P82970 282 aaKnown RBP17.42■□□□□ 0.38
CHTOP-206ENST00000495554 HSP90AA2PQ14568 343 aaPredicted RBP17.42■□□□□ 0.38
CHTOP-206ENST00000495554 VPS72Q15906 364 aa17.42■□□□□ 0.38
CHTOP-206ENST00000495554 GIMAP6Q6P9H5 292 aa17.42■□□□□ 0.38
CHTOP-206ENST00000495554 FBXL16Q8N461 479 aa17.42■□□□□ 0.38
CHTOP-206ENST00000495554 SMARCC1Q92922 1105 aaPredicted RBP17.42■□□□□ 0.38
CHTOP-206ENST00000495554 NGLY1Q96IV0 654 aa17.42■□□□□ 0.38
CHTOP-206ENST00000495554 C8orf37Q96NL8 207 aa17.42■□□□□ 0.38
CHTOP-206ENST00000495554 AKAP11Q9UKA4 1901 aa17.41■□□□□ 0.38
CHTOP-206ENST00000495554 GOLGA6L4A6NEF3 574 aa17.41■□□□□ 0.38
CHTOP-206ENST00000495554 FOXP2O15409 715 aa17.41■□□□□ 0.38
CHTOP-206ENST00000495554 APPBP2Q92624 585 aa17.41■□□□□ 0.38
CHTOP-206ENST00000495554 DDX11Q96FC9 970 aa17.41■□□□□ 0.38
CHTOP-206ENST00000495554 UTP14AQ9BVJ6 771 aaKnown RBP17.41■□□□□ 0.38
CHTOP-206ENST00000495554 PRDM4Q9UKN5 801 aa17.41■□□□□ 0.38
CHTOP-206ENST00000495554 APOBRQ0VD83 1088 aa17.41■□□□□ 0.38
CHTOP-206ENST00000495554 RESTQ13127 1097 aa17.41■□□□□ 0.38
CHTOP-206ENST00000495554 PTF1AQ7RTS3 328 aa17.41■□□□□ 0.38
CHTOP-206ENST00000495554 NSUN7Q8NE18 718 aaKnown RBP17.41■□□□□ 0.38
CHTOP-206ENST00000495554 LEO1Q8WVC0 666 aaPredicted RBP17.41■□□□□ 0.38
CHTOP-206ENST00000495554 ZNF274Q96GC6 653 aaPredicted RBP17.41■□□□□ 0.38
CHTOP-206ENST00000495554 ZNF512BQ96KM6 892 aaPredicted RBP17.41■□□□□ 0.38
CHTOP-206ENST00000495554 IMMTQ16891 758 aaKnown RBP17.4■□□□□ 0.38
CHTOP-206ENST00000495554 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.4■□□□□ 0.38
CHTOP-206ENST00000495554 TFIP11Q9UBB9 837 aaKnown RBP17.4■□□□□ 0.38
CHTOP-206ENST00000495554 ZKSCAN5Q9Y2L8 839 aa17.4■□□□□ 0.38
CHTOP-206ENST00000495554 NTSR2O95665 410 aa17.4■□□□□ 0.38
CHTOP-206ENST00000495554 FGFR2P21802 821 aa17.4■□□□□ 0.38
CHTOP-206ENST00000495554 PARP10Q53GL7 1025 aa17.4■□□□□ 0.38
CHTOP-206ENST00000495554 TTLL5Q6EMB2 1281 aa17.4■□□□□ 0.38
CHTOP-206ENST00000495554 NAA16Q6N069 864 aaPredicted RBP17.4■□□□□ 0.38
CHTOP-206ENST00000495554 HELBQ8NG08 1087 aaPredicted RBP17.4■□□□□ 0.38
CHTOP-206ENST00000495554 SEC31BQ9NQW1 1179 aa17.4■□□□□ 0.38
CHTOP-206ENST00000495554 FNBP4Q8N3X1 1017 aaPredicted RBP17.39■□□□□ 0.38
CHTOP-206ENST00000495554 LINC00116Q8NCU8 138 aa17.39■□□□□ 0.38
CHTOP-206ENST00000495554 NIP7Q9Y221 180 aaKnown RBP eCLIP17.39■□□□□ 0.38
CHTOP-206ENST00000495554 ZNF500O60304 480 aaPredicted RBP17.39■□□□□ 0.37
CHTOP-206ENST00000495554 CCDC192P0DO97 292 aa17.39■□□□□ 0.37
CHTOP-206ENST00000495554 CDK11BP21127 795 aaKnown RBP17.39■□□□□ 0.37
CHTOP-206ENST00000495554 KCNQ4P56696 695 aa17.39■□□□□ 0.37
CHTOP-206ENST00000495554 PUS7LQ9H0K6 701 aaKnown RBP17.39■□□□□ 0.37
CHTOP-206ENST00000495554 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.39■□□□□ 0.37
CHTOP-206ENST00000495554 CFAP45Q9UL16 551 aa17.39■□□□□ 0.37
CHTOP-206ENST00000495554 PTPDC1A2A3K4 754 aa17.38■□□□□ 0.37
CHTOP-206ENST00000495554 CTDNEP1O95476 244 aa17.38■□□□□ 0.37
CHTOP-206ENST00000495554 FGAP02671 866 aa17.38■□□□□ 0.37
CHTOP-206ENST00000495554 PDIA3P30101 505 aaKnown RBP17.38■□□□□ 0.37
CHTOP-206ENST00000495554 EVCP57679 992 aa17.38■□□□□ 0.37
CHTOP-206ENST00000495554 ZSCAN25Q6NSZ9 544 aa17.38■□□□□ 0.37
CHTOP-206ENST00000495554 NUP62CLQ9H1M0 184 aa17.38■□□□□ 0.37
CHTOP-206ENST00000495554 LAMA4Q16363 1823 aa17.38■□□□□ 0.37
CHTOP-206ENST00000495554 LIG1P18858 919 aa17.38■□□□□ 0.37
CHTOP-206ENST00000495554 PHKA1P46020 1223 aa17.38■□□□□ 0.37
CHTOP-206ENST00000495554 TTF1Q15361 905 aaPredicted RBP17.38■□□□□ 0.37
CHTOP-206ENST00000495554 CCDC102BQ68D86 513 aa17.38■□□□□ 0.37
CHTOP-206ENST00000495554 LRP5O75197 1615 aa17.38■□□□□ 0.37
CHTOP-206ENST00000495554 SNAP23O00161 211 aa17.37■□□□□ 0.37
CHTOP-206ENST00000495554 USP25Q9UHP3 1055 aa17.37■□□□□ 0.37
CHTOP-206ENST00000495554 MROH5Q6ZUA9 1318 aa17.37■□□□□ 0.37
CHTOP-206ENST00000495554 PTMAP06454 111 aaKnown RBP17.37■□□□□ 0.37
CHTOP-206ENST00000495554 CCT2P78371 535 aaKnown RBP17.37■□□□□ 0.37
CHTOP-206ENST00000495554 MAP3K11Q16584 847 aa17.37■□□□□ 0.37
CHTOP-206ENST00000495554 DDX19AQ9NUU7 478 aaKnown RBP17.37■□□□□ 0.37
CHTOP-206ENST00000495554 COL5A3P25940 1745 aaPredicted RBP17.37■□□□□ 0.37
CHTOP-206ENST00000495554 SALL1Q9NSC2 1324 aa17.37■□□□□ 0.37
CHTOP-206ENST00000495554 CHRM1P11229 460 aaPredicted RBP17.36■□□□□ 0.37
CHTOP-206ENST00000495554 ARID4AP29374 1257 aaPredicted RBP17.36■□□□□ 0.37
CHTOP-206ENST00000495554 CHST3Q7LGC8 479 aa17.36■□□□□ 0.37
CHTOP-206ENST00000495554 TEX2Q8IWB9 1127 aa17.36■□□□□ 0.37
CHTOP-206ENST00000495554 LPIN2Q92539 896 aa17.36■□□□□ 0.37
CHTOP-206ENST00000495554 GPAA1O43292 621 aa17.36■□□□□ 0.37
CHTOP-206ENST00000495554 PUM3Q15397 648 aaKnown RBP17.36■□□□□ 0.37
CHTOP-206ENST00000495554 PIH1D3Q9NQM4 214 aaKnown RBP17.36■□□□□ 0.37
CHTOP-206ENST00000495554 DACT1Q9NYF0 836 aa17.36■□□□□ 0.37
CHTOP-206ENST00000495554 DDX60Q8IY21 1712 aaKnown RBP17.36■□□□□ 0.37
CHTOP-206ENST00000495554 KDM4AO75164 1064 aa17.35■□□□□ 0.37
CHTOP-206ENST00000495554 NCOA5Q9HCD5 579 aaKnown RBP17.35■□□□□ 0.37
CHTOP-206ENST00000495554 ADD2P35612 726 aa17.35■□□□□ 0.37
CHTOP-206ENST00000495554 HAND2P61296 217 aa17.35■□□□□ 0.37
CHTOP-206ENST00000495554 CLEC4GQ6UXB4 293 aa17.35■□□□□ 0.37
CHTOP-206ENST00000495554 SMIM5Q71RC9 77 aa17.35■□□□□ 0.37
CHTOP-206ENST00000495554 TNMDQ9H2S6 317 aa17.35■□□□□ 0.37
CHTOP-206ENST00000495554 ZNF213O14771 459 aa17.35■□□□□ 0.37
CHTOP-206ENST00000495554 OFD1O75665 1012 aa17.35■□□□□ 0.37
CHTOP-206ENST00000495554 ADCY5O95622 1261 aa17.35■□□□□ 0.37
CHTOP-206ENST00000495554 SLC9C2Q5TAH2 1124 aa17.35■□□□□ 0.37
CHTOP-206ENST00000495554 ATL3Q6DD88 541 aa17.35■□□□□ 0.37
CHTOP-206ENST00000495554 NCOA7Q8NI08 942 aa17.35■□□□□ 0.37
CHTOP-206ENST00000495554 PGBD1Q96JS3 809 aa17.35■□□□□ 0.37
CHTOP-206ENST00000495554 ZNF831Q5JPB2 1677 aa17.34■□□□□ 0.37
CHTOP-206ENST00000495554 UQCRFS1P1P0C7P4 283 aa17.34■□□□□ 0.37
CHTOP-206ENST00000495554 UBE3CQ15386 1083 aa17.34■□□□□ 0.37
CHTOP-206ENST00000495554 CCDC152Q4G0S7 254 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms