RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 CHAF1AQ13111 956 aaPredicted RBP19■□□□□ 0.63
PHF1-211ENST00000495509 CWC27Q6UX04 472 aaKnown RBP19■□□□□ 0.63
PHF1-211ENST00000495509 RTKN2Q8IZC4 609 aa19■□□□□ 0.63
PHF1-211ENST00000495509 DENND2AQ9ULE3 1009 aa19■□□□□ 0.63
PHF1-211ENST00000495509 IL1R1P14778 569 aa18.99■□□□□ 0.63
PHF1-211ENST00000495509 AOC3Q16853 763 aa18.99■□□□□ 0.63
PHF1-211ENST00000495509 FAM227BQ96M60 508 aa18.99■□□□□ 0.63
PHF1-211ENST00000495509 EYA3Q99504 573 aa18.99■□□□□ 0.63
PHF1-211ENST00000495509 SYT17Q9BSW7 474 aa18.99■□□□□ 0.63
PHF1-211ENST00000495509 SEMA3EO15041 775 aa18.98■□□□□ 0.63
PHF1-211ENST00000495509 NMIQ13287 307 aaPredicted RBP18.98■□□□□ 0.63
PHF1-211ENST00000495509 IDH1O75874 414 aaKnown RBP18.98■□□□□ 0.63
PHF1-211ENST00000495509 CASC1Q6TDU7 716 aa18.98■□□□□ 0.63
PHF1-211ENST00000495509 ESYT1Q9BSJ8 1104 aa18.98■□□□□ 0.63
PHF1-211ENST00000495509 COA1Q9GZY4 146 aa18.98■□□□□ 0.63
PHF1-211ENST00000495509 DIAPH3Q9NSV4 1193 aa18.98■□□□□ 0.63
PHF1-211ENST00000495509 MFAP1P55081 439 aaKnown RBP18.97■□□□□ 0.63
PHF1-211ENST00000495509 TTF1Q15361 905 aaPredicted RBP18.97■□□□□ 0.63
PHF1-211ENST00000495509 GRIPAP1Q4V328 841 aa18.97■□□□□ 0.63
PHF1-211ENST00000495509 PSMD1Q99460 953 aa18.97■□□□□ 0.63
PHF1-211ENST00000495509 DBNDD1Q9H9R9 158 aa18.97■□□□□ 0.63
PHF1-211ENST00000495509 KCNQ5Q9NR82 932 aa18.97■□□□□ 0.63
PHF1-211ENST00000495509 ZNF277Q9NRM2 450 aaPredicted RBP18.97■□□□□ 0.63
PHF1-211ENST00000495509 ABCF2Q9UG63 623 aa18.97■□□□□ 0.63
PHF1-211ENST00000495509 A0A0D9SFI3 127 aa18.96■□□□□ 0.63
PHF1-211ENST00000495509 SOGA3Q5TF21 947 aa18.96■□□□□ 0.63
PHF1-211ENST00000495509 SEC62Q99442 399 aaKnown RBP18.96■□□□□ 0.63
PHF1-211ENST00000495509 UTRNP46939 3433 aa18.96■□□□□ 0.63
PHF1-211ENST00000495509 G3V3G9 751 aa18.96■□□□□ 0.63
PHF1-211ENST00000495509 RNF113AO15541 343 aaKnown RBP18.96■□□□□ 0.63
PHF1-211ENST00000495509 KIAA2012Q0VF49 1180 aa18.96■□□□□ 0.63
PHF1-211ENST00000495509 DCAF8Q5TAQ9 597 aa18.96■□□□□ 0.63
PHF1-211ENST00000495509 SUPT20HQ8NEM7 779 aa18.96■□□□□ 0.63
PHF1-211ENST00000495509 LRP2BPQ9P2M1 347 aa18.96■□□□□ 0.63
PHF1-211ENST00000495509 MYH7P12883 1935 aa18.95■□□□□ 0.62
PHF1-211ENST00000495509 FER1L6Q2WGJ9 1857 aa18.95■□□□□ 0.62
PHF1-211ENST00000495509 ZBTB22O15209 634 aa18.95■□□□□ 0.62
PHF1-211ENST00000495509 PPIP5K2O43314 1243 aa18.95■□□□□ 0.62
PHF1-211ENST00000495509 SLC9C2Q5TAH2 1124 aa18.95■□□□□ 0.62
PHF1-211ENST00000495509 PDS5AQ29RF7 1337 aaKnown RBP18.95■□□□□ 0.62
PHF1-211ENST00000495509 DOCK2Q92608 1830 aa18.94■□□□□ 0.62
PHF1-211ENST00000495509 NFKBIEO00221 500 aa18.94■□□□□ 0.62
PHF1-211ENST00000495509 HIP1O00291 1037 aa18.94■□□□□ 0.62
PHF1-211ENST00000495509 SGSM2O43147 1006 aa18.94■□□□□ 0.62
PHF1-211ENST00000495509 GTF2IP78347 998 aa18.94■□□□□ 0.62
PHF1-211ENST00000495509 GRIK5Q16478 980 aa18.94■□□□□ 0.62
PHF1-211ENST00000495509 RBM19Q9Y4C8 960 aaKnown RBP18.94■□□□□ 0.62
PHF1-211ENST00000495509 ADD2P35612 726 aa18.93■□□□□ 0.62
PHF1-211ENST00000495509 ZMYM1Q5SVZ6 1142 aa18.93■□□□□ 0.62
PHF1-211ENST00000495509 ARFGEF1Q9Y6D6 1849 aa18.93■□□□□ 0.62
PHF1-211ENST00000495509 SCN9AQ15858 1988 aa18.93■□□□□ 0.62
PHF1-211ENST00000495509 RFX7Q2KHR2 1363 aa18.93■□□□□ 0.62
PHF1-211ENST00000495509 ECE2O60344 883 aa18.93■□□□□ 0.62
PHF1-211ENST00000495509 PDE6AP16499 860 aa18.93■□□□□ 0.62
PHF1-211ENST00000495509 PRDX5P30044 214 aa18.93■□□□□ 0.62
PHF1-211ENST00000495509 MAP3K12Q12852 859 aa18.93■□□□□ 0.62
PHF1-211ENST00000495509 MAGEB6Q8N7X4 407 aa18.93■□□□□ 0.62
PHF1-211ENST00000495509 WDR66Q8TBY9 1149 aa18.93■□□□□ 0.62
PHF1-211ENST00000495509 ZNF384Q8TF68 577 aa18.93■□□□□ 0.62
PHF1-211ENST00000495509 OSBP2Q969R2 916 aa18.93■□□□□ 0.62
PHF1-211ENST00000495509 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.93■□□□□ 0.627e-8■■■■□ 22.1
PHF1-211ENST00000495509 RAI14Q9P0K7 980 aa18.93■□□□□ 0.62
PHF1-211ENST00000495509 TCRBV5S4A2TA0A5A2 114 aa18.92■□□□□ 0.62
PHF1-211ENST00000495509 CCDC129Q6ZRS4 1044 aa18.92■□□□□ 0.62
PHF1-211ENST00000495509 ZNF589Q86UQ0 364 aaPredicted RBP18.92■□□□□ 0.62
PHF1-211ENST00000495509 RUFY2Q8WXA3 655 aa18.92■□□□□ 0.62
PHF1-211ENST00000495509 MXD3Q9BW11 206 aa18.92■□□□□ 0.62
PHF1-211ENST00000495509 ZNF532Q9HCE3 1301 aa18.92■□□□□ 0.62
PHF1-211ENST00000495509 ZFYP08048 801 aaPredicted RBP18.91■□□□□ 0.62
PHF1-211ENST00000495509 TTLL5Q6EMB2 1281 aa18.91■□□□□ 0.62
PHF1-211ENST00000495509 PODNQ7Z5L7 613 aa18.91■□□□□ 0.62
PHF1-211ENST00000495509 LARGE2Q8N3Y3 721 aa18.91■□□□□ 0.62
PHF1-211ENST00000495509 FBXW7Q969H0 707 aa18.91■□□□□ 0.62
PHF1-211ENST00000495509 PUS7LQ9H0K6 701 aaKnown RBP18.91■□□□□ 0.62
PHF1-211ENST00000495509 TAOK3Q9H2K8 898 aa18.91■□□□□ 0.62
PHF1-211ENST00000495509 COL4A5P29400 1685 aa18.91■□□□□ 0.62
PHF1-211ENST00000495509 FAM205AQ6ZU69 1335 aa18.91■□□□□ 0.62
PHF1-211ENST00000495509 YDJCA8MPS7 323 aa18.91■□□□□ 0.62
PHF1-211ENST00000495509 PRELPP51888 382 aa18.91■□□□□ 0.62
PHF1-211ENST00000495509 RASSF7Q02833 373 aa18.91■□□□□ 0.62
PHF1-211ENST00000495509 MCMDC2Q4G0Z9 681 aa18.91■□□□□ 0.62
PHF1-211ENST00000495509 ZSCAN25Q6NSZ9 544 aa18.91■□□□□ 0.62
PHF1-211ENST00000495509 ERICH6Q7L0X2 663 aa18.91■□□□□ 0.62
PHF1-211ENST00000495509 TICAM2Q86XR7 235 aa18.91■□□□□ 0.62
PHF1-211ENST00000495509 SALL1Q9NSC2 1324 aa18.9■□□□□ 0.62
PHF1-211ENST00000495509 M0R2C6 588 aa18.9■□□□□ 0.62
PHF1-211ENST00000495509 IARSP41252 1262 aaKnown RBP18.9■□□□□ 0.62
PHF1-211ENST00000495509 MECOMQ03112 1051 aa18.9■□□□□ 0.62
PHF1-211ENST00000495509 LRRFIP1Q32MZ4 808 aaKnown RBP18.9■□□□□ 0.62
PHF1-211ENST00000495509 MFSD14BQ5SR56 506 aa18.9■□□□□ 0.62
PHF1-211ENST00000495509 USP26Q9BXU7 913 aa18.9■□□□□ 0.62
PHF1-211ENST00000495509 ANO2Q9NQ90 1003 aa18.9■□□□□ 0.62
PHF1-211ENST00000495509 HELLSQ9NRZ9 838 aa18.9■□□□□ 0.62
PHF1-211ENST00000495509 UBE3CQ15386 1083 aa18.89■□□□□ 0.61
PHF1-211ENST00000495509 ADGRA1Q86SQ6 560 aa18.89■□□□□ 0.61
PHF1-211ENST00000495509 CERS5Q8N5B7 392 aa18.89■□□□□ 0.61
PHF1-211ENST00000495509 APPBP2Q92624 585 aa18.89■□□□□ 0.61
PHF1-211ENST00000495509 NSUN4Q96CB9 384 aaKnown RBP18.89■□□□□ 0.61
PHF1-211ENST00000495509 MAST3O60307 1309 aa18.89■□□□□ 0.61
PHF1-211ENST00000495509 LDHBP07195 334 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms