RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 CASP7P55210 303 aa22.59■■□□□ 1.21
NUP50-218ENST00000493456 SUPT20HL1Q3ZLR7 823 aa22.59■■□□□ 1.21
NUP50-218ENST00000493456 C15orf52Q6ZUT6 534 aaKnown RBP22.59■■□□□ 1.21
NUP50-218ENST00000493456 TSR2Q969E8 191 aaKnown RBP22.59■■□□□ 1.21
NUP50-218ENST00000493456 FZD1Q9UP38 647 aa22.59■■□□□ 1.21
NUP50-218ENST00000493456 FKBP1AP62942 108 aaKnown RBP22.58■■□□□ 1.21
NUP50-218ENST00000493456 OTUD7BQ6GQQ9 843 aa22.58■■□□□ 1.21
NUP50-218ENST00000493456 CERS5Q8N5B7 392 aa22.58■■□□□ 1.21
NUP50-218ENST00000493456 ERO1AQ96HE7 468 aa22.58■■□□□ 1.21
NUP50-218ENST00000493456 IRS2Q9Y4H2 1338 aa22.57■■□□□ 1.2
NUP50-218ENST00000493456 ANKRD18BA2A2Z9 1011 aa22.57■■□□□ 1.2
NUP50-218ENST00000493456 IGF2BP3O00425 579 aaKnown RBP eCLIP22.57■■□□□ 1.2
NUP50-218ENST00000493456 SLC4A2P04920 1241 aa22.57■■□□□ 1.2
NUP50-218ENST00000493456 TWISTNBQ3B726 338 aaPredicted RBP22.57■■□□□ 1.2
NUP50-218ENST00000493456 G2E3Q7L622 706 aa22.57■■□□□ 1.2
NUP50-218ENST00000493456 CLMNQ96JQ2 1002 aa22.57■■□□□ 1.2
NUP50-218ENST00000493456 RBBP6Q7Z6E9 1792 aaKnown RBP22.56■■□□□ 1.2
NUP50-218ENST00000493456 SPDYE2BA6NHP3 402 aa22.56■■□□□ 1.2
NUP50-218ENST00000493456 SPDYE6P0CI01 402 aa22.56■■□□□ 1.2
NUP50-218ENST00000493456 IL1R1P14778 569 aa22.56■■□□□ 1.2
NUP50-218ENST00000493456 IREB2P48200 963 aaKnown RBP22.56■■□□□ 1.2
NUP50-218ENST00000493456 ZNF804AQ7Z570 1209 aa22.56■■□□□ 1.2
NUP50-218ENST00000493456 FLIIQ13045 1269 aa22.55■■□□□ 1.2
NUP50-218ENST00000493456 CFAP100Q494V2 611 aa22.55■■□□□ 1.2
NUP50-218ENST00000493456 LINS1Q8NG48 757 aa22.55■■□□□ 1.2
NUP50-218ENST00000493456 PTPN22Q9Y2R2 807 aa22.55■■□□□ 1.2
NUP50-218ENST00000493456 A0A1B0GUL6 1792 aa22.54■■□□□ 1.2
NUP50-218ENST00000493456 CCDC27Q2M243 656 aa22.54■■□□□ 1.2
NUP50-218ENST00000493456 DNAAF4Q8WXU2 420 aa22.54■■□□□ 1.2
NUP50-218ENST00000493456 VEZTQ9HBM0 779 aa22.54■■□□□ 1.2
NUP50-218ENST00000493456 CLRN2A0PK11 232 aa22.53■■□□□ 1.2
NUP50-218ENST00000493456 POTEFA5A3E0 1075 aa22.53■■□□□ 1.2
NUP50-218ENST00000493456 F8W031 263 aaPredicted RBP22.53■■□□□ 1.2
NUP50-218ENST00000493456 CRHR2Q13324 411 aa22.53■■□□□ 1.2
NUP50-218ENST00000493456 IFIT5Q13325 482 aaKnown RBP22.53■■□□□ 1.2
NUP50-218ENST00000493456 FKBP5Q13451 457 aaPredicted RBP22.53■■□□□ 1.2
NUP50-218ENST00000493456 ANKRD13AQ8IZ07 590 aa22.53■■□□□ 1.2
NUP50-218ENST00000493456 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.53■■□□□ 1.2
NUP50-218ENST00000493456 PCDHAC2Q9Y5I4 1007 aa22.53■■□□□ 1.2
NUP50-218ENST00000493456 SNAP23O00161 211 aa22.52■■□□□ 1.2
NUP50-218ENST00000493456 TAF5LO75529 589 aa22.52■■□□□ 1.2
NUP50-218ENST00000493456 NBPF12Q5TAG4 269 aaPredicted RBP22.52■■□□□ 1.2
NUP50-218ENST00000493456 CD99L2Q8TCZ2 262 aa22.52■■□□□ 1.2
NUP50-218ENST00000493456 ARMC5Q96C12 935 aa22.52■■□□□ 1.2
NUP50-218ENST00000493456 PRMT6Q96LA8 375 aaPredicted RBP22.52■■□□□ 1.2
NUP50-218ENST00000493456 EFCC1Q9HA90 598 aa22.52■■□□□ 1.2
NUP50-218ENST00000493456 TESPA1A2RU30 521 aaPredicted RBP22.51■■□□□ 1.19
NUP50-218ENST00000493456 GJA5P36382 358 aa22.51■■□□□ 1.19
NUP50-218ENST00000493456 TNFAIP1Q13829 316 aa22.51■■□□□ 1.19
NUP50-218ENST00000493456 HABP4Q5JVS0 413 aaKnown RBP22.51■■□□□ 1.19
NUP50-218ENST00000493456 USP2O75604 605 aaPredicted RBP22.5■■□□□ 1.19
NUP50-218ENST00000493456 SP3Q02447 781 aa22.5■■□□□ 1.19
NUP50-218ENST00000493456 RASA3Q14644 834 aa22.5■■□□□ 1.19
NUP50-218ENST00000493456 HELBQ8NG08 1087 aaPredicted RBP22.5■■□□□ 1.19
NUP50-218ENST00000493456 IL16Q14005 1332 aa22.5■■□□□ 1.19
NUP50-218ENST00000493456 RBM5P52756 815 aaKnown RBP eCLIP22.49■■□□□ 1.19
NUP50-218ENST00000493456 WWC1Q8IX03 1113 aa22.49■■□□□ 1.19
NUP50-218ENST00000493456 FOXO4P98177 505 aa22.48■■□□□ 1.19
NUP50-218ENST00000493456 PTPN18Q99952 460 aa22.48■■□□□ 1.19
NUP50-218ENST00000493456 CHMP3Q9Y3E7 222 aa22.48■■□□□ 1.19
NUP50-218ENST00000493456 CACNA1FO60840 1977 aa22.48■■□□□ 1.19
NUP50-218ENST00000493456 OTOFQ9HC10 1997 aa22.48■■□□□ 1.19
NUP50-218ENST00000493456 ARHGEF6Q15052 776 aa22.47■■□□□ 1.19
NUP50-218ENST00000493456 OPTNQ96CV9 577 aa22.47■■□□□ 1.19
NUP50-218ENST00000493456 SERPINA10Q9UK55 444 aa22.47■■□□□ 1.19
NUP50-218ENST00000493456 AOX1Q06278 1338 aa22.47■■□□□ 1.19
NUP50-218ENST00000493456 FAM205AQ6ZU69 1335 aa22.47■■□□□ 1.19
NUP50-218ENST00000493456 SPDYE2Q495Y8 402 aa22.46■■□□□ 1.19
NUP50-218ENST00000493456 JAG2Q9Y219 1238 aa22.46■■□□□ 1.19
NUP50-218ENST00000493456 CCDC57Q2TAC2 916 aa22.45■■□□□ 1.18
NUP50-218ENST00000493456 NCBP3Q53F19 620 aaKnown RBP22.45■■□□□ 1.18
NUP50-218ENST00000493456 TAF7LQ5H9L4 462 aa22.45■■□□□ 1.18
NUP50-218ENST00000493456 LDHAL6AQ6ZMR3 332 aa22.45■■□□□ 1.18
NUP50-218ENST00000493456 TMEM106CQ9BVX2 250 aa22.45■■□□□ 1.18
NUP50-218ENST00000493456 ELP3Q9H9T3 547 aa22.45■■□□□ 1.18
NUP50-218ENST00000493456 ARAP2Q8WZ64 1704 aa22.45■■□□□ 1.18
NUP50-218ENST00000493456 KIAA0100Q14667 2235 aaKnown RBP22.45■■□□□ 1.18
NUP50-218ENST00000493456 EN2P19622 333 aaPredicted RBP22.44■■□□□ 1.18
NUP50-218ENST00000493456 MFSD14BQ5SR56 506 aa22.44■■□□□ 1.18
NUP50-218ENST00000493456 ZNF333Q96JL9 665 aa22.44■■□□□ 1.18
NUP50-218ENST00000493456 MS4A4AQ96JQ5 239 aa22.44■■□□□ 1.18
NUP50-218ENST00000493456 ZNF70Q9UC06 446 aaPredicted RBP22.44■■□□□ 1.18
NUP50-218ENST00000493456 FANCIQ9NVI1 1328 aa22.43■■□□□ 1.18
NUP50-218ENST00000493456 GTF2A2P52657 109 aa22.43■■□□□ 1.18
NUP50-218ENST00000493456 LMBR1LQ6UX01 489 aa22.43■■□□□ 1.18
NUP50-218ENST00000493456 NBPF11Q86T75 865 aa22.43■■□□□ 1.18
NUP50-218ENST00000493456 CNNM1Q9NRU3 951 aa22.43■■□□□ 1.18
NUP50-218ENST00000493456 TTF2Q9UNY4 1162 aaKnown RBP22.43■■□□□ 1.18
NUP50-218ENST00000493456 UBE4AQ14139 1066 aa22.42■■□□□ 1.18
NUP50-218ENST00000493456 BEND3Q5T5X7 828 aa22.42■■□□□ 1.18
NUP50-218ENST00000493456 TDRD7Q8NHU6 1098 aaKnown RBP22.42■■□□□ 1.18
NUP50-218ENST00000493456 TEPSINQ96N21 525 aa22.42■■□□□ 1.18
NUP50-218ENST00000493456 ZFYVE28Q9HCC9 887 aa22.42■■□□□ 1.18
NUP50-218ENST00000493456 PLIN1O60240 522 aa22.41■■□□□ 1.18
NUP50-218ENST00000493456 TNNI2P48788 182 aa22.41■■□□□ 1.18
NUP50-218ENST00000493456 CAP1Q01518 475 aa22.41■■□□□ 1.18
NUP50-218ENST00000493456 TAF1CQ15572 869 aaPredicted RBP22.41■■□□□ 1.18
NUP50-218ENST00000493456 SLC9C1Q4G0N8 1177 aa22.41■■□□□ 1.18
NUP50-218ENST00000493456 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.41■■□□□ 1.18
NUP50-218ENST00000493456 BRI3BPQ8WY22 251 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms