RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 F8W031 263 aaPredicted RBP17.87■□□□□ 0.45
VARS-227ENST00000489979 CSF1RP07333 972 aa17.87■□□□□ 0.45
VARS-227ENST00000489979 CASP7P55210 303 aa17.87■□□□□ 0.45
VARS-227ENST00000489979 MTMR14Q8NCE2 650 aa17.87■□□□□ 0.45
VARS-227ENST00000489979 GCC1Q96CN9 775 aa17.87■□□□□ 0.45
VARS-227ENST00000489979 PPP2R3BQ9Y5P8 575 aa17.87■□□□□ 0.45
VARS-227ENST00000489979 KIAA0100Q14667 2235 aaKnown RBP17.87■□□□□ 0.45
VARS-227ENST00000489979 LAMB1P07942 1786 aa17.86■□□□□ 0.45
VARS-227ENST00000489979 CLRN2A0PK11 232 aa17.86■□□□□ 0.45
VARS-227ENST00000489979 TAF5LO75529 589 aa17.86■□□□□ 0.45
VARS-227ENST00000489979 SLC4A2P04920 1241 aa17.86■□□□□ 0.45
VARS-227ENST00000489979 CFAP100Q494V2 611 aa17.86■□□□□ 0.45
VARS-227ENST00000489979 INTS3Q68E01 1043 aaKnown RBP17.86■□□□□ 0.45
VARS-227ENST00000489979 IRS2Q9Y4H2 1338 aa17.86■□□□□ 0.45
VARS-227ENST00000489979 MYO1BO43795 1136 aa17.85■□□□□ 0.45
VARS-227ENST00000489979 TWISTNBQ3B726 338 aaPredicted RBP17.85■□□□□ 0.45
VARS-227ENST00000489979 SUPT20HL1Q3ZLR7 823 aa17.85■□□□□ 0.45
VARS-227ENST00000489979 HELBQ8NG08 1087 aaPredicted RBP17.85■□□□□ 0.45
VARS-227ENST00000489979 PRMT6Q96LA8 375 aaPredicted RBP17.85■□□□□ 0.45
VARS-227ENST00000489979 VEZTQ9HBM0 779 aa17.85■□□□□ 0.45
VARS-227ENST00000489979 AOX1Q06278 1338 aa17.84■□□□□ 0.45
VARS-227ENST00000489979 ANKRD18BA2A2Z9 1011 aa17.84■□□□□ 0.45
VARS-227ENST00000489979 SPDYE2BA6NHP3 402 aa17.84■□□□□ 0.45
VARS-227ENST00000489979 UNCXA6NJT0 531 aa17.84■□□□□ 0.45
VARS-227ENST00000489979 SPDYE6P0CI01 402 aa17.84■□□□□ 0.45
VARS-227ENST00000489979 GJA5P36382 358 aa17.84■□□□□ 0.45
VARS-227ENST00000489979 NBPF12Q5TAG4 269 aaPredicted RBP17.84■□□□□ 0.45
VARS-227ENST00000489979 C15orf52Q6ZUT6 534 aaKnown RBP17.84■□□□□ 0.45
VARS-227ENST00000489979 CD99L2Q8TCZ2 262 aa17.84■□□□□ 0.45
VARS-227ENST00000489979 ERO1AQ96HE7 468 aa17.84■□□□□ 0.45
VARS-227ENST00000489979 MYH16Q9H6N6 1097 aa17.84■□□□□ 0.45
VARS-227ENST00000489979 PTPN22Q9Y2R2 807 aa17.84■□□□□ 0.45
VARS-227ENST00000489979 A0A1B0GUL6 1792 aa17.84■□□□□ 0.45
VARS-227ENST00000489979 BRCA2P51587 3418 aa17.83■□□□□ 0.45
VARS-227ENST00000489979 IL1R1P14778 569 aa17.83■□□□□ 0.44
VARS-227ENST00000489979 IREB2P48200 963 aaKnown RBP17.83■□□□□ 0.44
VARS-227ENST00000489979 FLIIQ13045 1269 aa17.83■□□□□ 0.44
VARS-227ENST00000489979 CRHR2Q13324 411 aa17.83■□□□□ 0.44
VARS-227ENST00000489979 DNAAF4Q8WXU2 420 aa17.83■□□□□ 0.44
VARS-227ENST00000489979 JAG2Q9Y219 1238 aa17.83■□□□□ 0.44
VARS-227ENST00000489979 RBBP6Q7Z6E9 1792 aaKnown RBP17.82■□□□□ 0.44
VARS-227ENST00000489979 USP2O75604 605 aaPredicted RBP17.82■□□□□ 0.44
VARS-227ENST00000489979 FKBP5Q13451 457 aaPredicted RBP17.82■□□□□ 0.44
VARS-227ENST00000489979 HABP4Q5JVS0 413 aaKnown RBP17.82■□□□□ 0.44
VARS-227ENST00000489979 OTUD7BQ6GQQ9 843 aa17.82■□□□□ 0.44
VARS-227ENST00000489979 ZNF804AQ7Z570 1209 aa17.82■□□□□ 0.44
VARS-227ENST00000489979 EFCC1Q9HA90 598 aa17.82■□□□□ 0.44
VARS-227ENST00000489979 RBM5P52756 815 aaKnown RBP eCLIP17.81■□□□□ 0.44
VARS-227ENST00000489979 FKBP1AP62942 108 aaKnown RBP17.81■□□□□ 0.44
VARS-227ENST00000489979 RASA3Q14644 834 aa17.81■□□□□ 0.44
VARS-227ENST00000489979 LINS1Q8NG48 757 aa17.81■□□□□ 0.44
VARS-227ENST00000489979 PTPN18Q99952 460 aa17.81■□□□□ 0.44
VARS-227ENST00000489979 CHMP3Q9Y3E7 222 aa17.81■□□□□ 0.44
VARS-227ENST00000489979 FOXO4P98177 505 aa17.8■□□□□ 0.44
VARS-227ENST00000489979 CAP1Q01518 475 aa17.8■□□□□ 0.44
VARS-227ENST00000489979 SP3Q02447 781 aa17.8■□□□□ 0.44
VARS-227ENST00000489979 IFIT5Q13325 482 aaKnown RBP17.8■□□□□ 0.44
VARS-227ENST00000489979 ANKRD13AQ8IZ07 590 aa17.8■□□□□ 0.44
VARS-227ENST00000489979 ARMC5Q96C12 935 aa17.8■□□□□ 0.44
VARS-227ENST00000489979 CACNA1FO60840 1977 aa17.8■□□□□ 0.44
VARS-227ENST00000489979 OTOFQ9HC10 1997 aa17.8■□□□□ 0.44
VARS-227ENST00000489979 TESPA1A2RU30 521 aaPredicted RBP17.79■□□□□ 0.44
VARS-227ENST00000489979 EN2P19622 333 aaPredicted RBP17.79■□□□□ 0.44
VARS-227ENST00000489979 ELP3Q9H9T3 547 aa17.79■□□□□ 0.44
VARS-227ENST00000489979 PLIN1O60240 522 aa17.78■□□□□ 0.44
VARS-227ENST00000489979 CCDC27Q2M243 656 aa17.78■□□□□ 0.44
VARS-227ENST00000489979 WWC1Q8IX03 1113 aa17.78■□□□□ 0.44
VARS-227ENST00000489979 OPTNQ96CV9 577 aa17.78■□□□□ 0.44
VARS-227ENST00000489979 ZNF594Q96JF6 807 aaPredicted RBP17.77■□□□□ 0.44
VARS-227ENST00000489979 ZNF70Q9UC06 446 aaPredicted RBP17.77■□□□□ 0.44
VARS-227ENST00000489979 TNFAIP1Q13829 316 aa17.76■□□□□ 0.43
VARS-227ENST00000489979 SPDYE2Q495Y8 402 aa17.76■□□□□ 0.43
VARS-227ENST00000489979 LMBR1LQ6UX01 489 aa17.76■□□□□ 0.43
VARS-227ENST00000489979 MS4A4AQ96JQ5 239 aa17.76■□□□□ 0.43
VARS-227ENST00000489979 FAM205AQ6ZU69 1335 aa17.75■□□□□ 0.43
VARS-227ENST00000489979 TAF7LQ5H9L4 462 aa17.75■□□□□ 0.43
VARS-227ENST00000489979 EPHA10Q5JZY3 1008 aa17.75■□□□□ 0.43
VARS-227ENST00000489979 MFSD14BQ5SR56 506 aa17.75■□□□□ 0.43
VARS-227ENST00000489979 LDHAL6AQ6ZMR3 332 aa17.75■□□□□ 0.43
VARS-227ENST00000489979 CDAN1Q8IWY9 1227 aa17.75■□□□□ 0.43
VARS-227ENST00000489979 CNKSR2Q8WXI2 1034 aa17.75■□□□□ 0.43
VARS-227ENST00000489979 TMEM106CQ9BVX2 250 aa17.75■□□□□ 0.43
VARS-227ENST00000489979 TDRD3Q9H7E2 651 aaKnown RBP17.75■□□□□ 0.43
VARS-227ENST00000489979 CNNM1Q9NRU3 951 aa17.75■□□□□ 0.43
VARS-227ENST00000489979 TTF2Q9UNY4 1162 aaKnown RBP17.75■□□□□ 0.43
VARS-227ENST00000489979 IL16Q14005 1332 aa17.74■□□□□ 0.43
VARS-227ENST00000489979 F6X3S4 739 aa17.74■□□□□ 0.43
VARS-227ENST00000489979 CCDC57Q2TAC2 916 aa17.74■□□□□ 0.43
VARS-227ENST00000489979 BEND3Q5T5X7 828 aa17.74■□□□□ 0.43
VARS-227ENST00000489979 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.74■□□□□ 0.43
VARS-227ENST00000489979 BRI3BPQ8WY22 251 aa17.74■□□□□ 0.43
VARS-227ENST00000489979 ZNF333Q96JL9 665 aa17.74■□□□□ 0.43
VARS-227ENST00000489979 TEPSINQ96N21 525 aa17.74■□□□□ 0.43
VARS-227ENST00000489979 SERPINA10Q9UK55 444 aa17.74■□□□□ 0.43
VARS-227ENST00000489979 FANCIQ9NVI1 1328 aa17.73■□□□□ 0.43
VARS-227ENST00000489979 CCL15-CCL14A0A0B4J2E2 113 aa17.73■□□□□ 0.43
VARS-227ENST00000489979 TCP10L2B9ZVM9 353 aa17.73■□□□□ 0.43
VARS-227ENST00000489979 VAMP4O75379 141 aa17.73■□□□□ 0.43
VARS-227ENST00000489979 VGLL4Q14135 290 aa17.73■□□□□ 0.43
VARS-227ENST00000489979 TAF1CQ15572 869 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms