RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 M0R2C6 588 aa14.37□□□□□ -0.11
HSPG2-211ENST00000486901 SPTLC2O15270 562 aa14.37□□□□□ -0.11
HSPG2-211ENST00000486901 APPP05067 770 aa14.37□□□□□ -0.11
HSPG2-211ENST00000486901 UBASH3AP57075 661 aa14.36□□□□□ -0.11
HSPG2-211ENST00000486901 GABPB1Q06547 395 aaPredicted RBP14.36□□□□□ -0.11
HSPG2-211ENST00000486901 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.36□□□□□ -0.11
HSPG2-211ENST00000486901 WDHD1O75717 1129 aaPredicted RBP14.36□□□□□ -0.11
HSPG2-211ENST00000486901 ATP5JP18859 108 aa14.36□□□□□ -0.11
HSPG2-211ENST00000486901 HNRNPH2P55795 449 aaKnown RBP14.36□□□□□ -0.11
HSPG2-211ENST00000486901 CMTR1Q8N1G2 835 aaKnown RBP14.36□□□□□ -0.11
HSPG2-211ENST00000486901 PXDNQ92626 1479 aa14.36□□□□□ -0.11
HSPG2-211ENST00000486901 IFIT1P09914 478 aaKnown RBP14.35□□□□□ -0.11
HSPG2-211ENST00000486901 PNMA6AP0CW24 399 aaPredicted RBP14.35□□□□□ -0.11
HSPG2-211ENST00000486901 PFKFB1P16118 471 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 ZNF790Q6PG37 636 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 GRAMD1CQ8IYS0 662 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 SIRT1Q96EB6 747 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 CEMIPQ8WUJ3 1361 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 A0A0U1RQJ8 604 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 CHRNA2Q15822 529 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 SARM1Q6SZW1 724 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 MICU3Q86XE3 530 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 ATRIPQ8WXE1 791 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 CARMIL3Q8ND23 1372 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 GCP02774 474 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 GNG11P61952 73 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 LINC00301Q8NCQ3 95 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 SMARCC2Q8TAQ2 1214 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 OSBP2Q969R2 916 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 SENP2Q9HC62 589 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 FANCLQ9NW38 375 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 FHOD1Q9Y613 1164 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 FAM208AQ9UK61 1670 aaKnown RBP14.35□□□□□ -0.11
HSPG2-211ENST00000486901 KAT6BQ8WYB5 2073 aa14.35□□□□□ -0.11
HSPG2-211ENST00000486901 CERS3Q8IU89 383 aa14.34□□□□□ -0.11
HSPG2-211ENST00000486901 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
HSPG2-211ENST00000486901 MROH7-TTC4A0A0A0MT08 1334 aa14.34□□□□□ -0.11
HSPG2-211ENST00000486901 CTAGE5O15320 804 aa14.34□□□□□ -0.11
HSPG2-211ENST00000486901 ADORA1P30542 326 aa14.34□□□□□ -0.11
HSPG2-211ENST00000486901 PLA2G4AP47712 749 aa14.34□□□□□ -0.11
HSPG2-211ENST00000486901 TMCO3Q6UWJ1 677 aa14.34□□□□□ -0.11
HSPG2-211ENST00000486901 KBTBD3Q8NAB2 608 aa14.34□□□□□ -0.11
HSPG2-211ENST00000486901 ANKRD65E5RJM6 399 aa14.34□□□□□ -0.11
HSPG2-211ENST00000486901 EVCP57679 992 aa14.34□□□□□ -0.11
HSPG2-211ENST00000486901 WDR24Q96S15 920 aa14.34□□□□□ -0.11
HSPG2-211ENST00000486901 MAST3O60307 1309 aa14.33□□□□□ -0.11
HSPG2-211ENST00000486901 PRC1O43663 620 aa14.33□□□□□ -0.11
HSPG2-211ENST00000486901 CDC25BP30305 580 aa14.33□□□□□ -0.11
HSPG2-211ENST00000486901 USPL1Q5W0Q7 1092 aa14.33□□□□□ -0.11
HSPG2-211ENST00000486901 WWC2Q6AWC2 1192 aa14.33□□□□□ -0.11
HSPG2-211ENST00000486901 KLHL10Q6JEL2 608 aa14.33□□□□□ -0.11
HSPG2-211ENST00000486901 PUF60Q9UHX1 559 aaKnown RBP14.33□□□□□ -0.11
HSPG2-211ENST00000486901 RGPD8O14715 1765 aaPredicted RBP14.33□□□□□ -0.12
HSPG2-211ENST00000486901 MTF1Q14872 753 aa14.33□□□□□ -0.12
HSPG2-211ENST00000486901 TTC5Q8N0Z6 440 aa14.33□□□□□ -0.12
HSPG2-211ENST00000486901 HINFPQ9BQA5 517 aa14.33□□□□□ -0.12
HSPG2-211ENST00000486901 LZTFL1Q9NQ48 299 aa14.33□□□□□ -0.12
HSPG2-211ENST00000486901 BMS1Q14692 1282 aaKnown RBP14.33□□□□□ -0.12
HSPG2-211ENST00000486901 TTLL7Q6ZT98 887 aa14.33□□□□□ -0.12
HSPG2-211ENST00000486901 TIGD1Q96MW7 591 aa14.33□□□□□ -0.12
HSPG2-211ENST00000486901 TOMM22Q9NS69 142 aa14.33□□□□□ -0.12
HSPG2-211ENST00000486901 NEMFO60524 1076 aa14.32□□□□□ -0.12
HSPG2-211ENST00000486901 PHACTR2O75167 634 aa14.32□□□□□ -0.12
HSPG2-211ENST00000486901 SCARF1Q14162 830 aa14.32□□□□□ -0.12
HSPG2-211ENST00000486901 MYSM1Q5VVJ2 828 aa14.32□□□□□ -0.12
HSPG2-211ENST00000486901 NAA16Q6N069 864 aaPredicted RBP14.32□□□□□ -0.12
HSPG2-211ENST00000486901 HAUS7Q99871 368 aa14.32□□□□□ -0.12
HSPG2-211ENST00000486901 METTL22Q9BUU2 404 aaPredicted RBP14.32□□□□□ -0.12
HSPG2-211ENST00000486901 CASP1P29466 404 aa14.32□□□□□ -0.12
HSPG2-211ENST00000486901 SYKP43405 635 aa14.32□□□□□ -0.12
HSPG2-211ENST00000486901 ADALQ6DHV7 355 aa14.32□□□□□ -0.12
HSPG2-211ENST00000486901 TOP1P11387 765 aaKnown RBP14.32□□□□□ -0.12
HSPG2-211ENST00000486901 CDC27P30260 824 aa14.32□□□□□ -0.12
HSPG2-211ENST00000486901 RFX5P48382 616 aaPredicted RBP14.32□□□□□ -0.12
HSPG2-211ENST00000486901 STX17P56962 302 aa14.32□□□□□ -0.12
HSPG2-211ENST00000486901 GSDMDP57764 484 aa14.32□□□□□ -0.12
HSPG2-211ENST00000486901 TRIM34Q9BYJ4 488 aa14.32□□□□□ -0.12
HSPG2-211ENST00000486901 AKAP12Q02952 1782 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 SASH3O75995 380 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 ETF1P62495 437 aaKnown RBP14.31□□□□□ -0.12
HSPG2-211ENST00000486901 NCAPHQ15003 741 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 LONRF3Q496Y0 759 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 PROSER2Q86WR7 435 aaPredicted RBP14.31□□□□□ -0.12
HSPG2-211ENST00000486901 RGPD1P0DJD0 1748 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 A0A1B0GUL7 405 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 SETD1AO15047 1707 aaKnown RBP14.31□□□□□ -0.12
HSPG2-211ENST00000486901 NRDCO43847 1150 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 PDE4BQ07343 736 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 MCM6Q14566 821 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 TOGARAM2Q6ZUX3 1019 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 SYNE4Q8N205 404 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 RAPGEF4Q8WZA2 1011 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 SMARCE1Q969G3 411 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 HDAC5Q9UQL6 1122 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 PXDNLA1KZ92 1463 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 CCDC66A2RUB6 948 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 A1BGP04217 495 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 TPM4P67936 248 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 GRIN1Q05586 938 aa14.31□□□□□ -0.12
HSPG2-211ENST00000486901 RALYLQ86SE5 291 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms