RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 LATS2Q9NRM7 1088 aa5.82□□□□□ -1.48
VPS41-212ENST00000482217 RNF19AQ9NV58 838 aa5.82□□□□□ -1.48
VPS41-212ENST00000482217 DZANK1Q9NVP4 752 aa5.82□□□□□ -1.48
VPS41-212ENST00000482217 FAM8A1Q9UBU6 413 aa5.82□□□□□ -1.48
VPS41-212ENST00000482217 VTI1BQ9UEU0 232 aa5.82□□□□□ -1.48
VPS41-212ENST00000482217 NAGPAQ9UK23 515 aa5.82□□□□□ -1.48
VPS41-212ENST00000482217 J3QW42 95 aa5.81□□□□□ -1.48
VPS41-212ENST00000482217 PROCP04070 461 aa5.81□□□□□ -1.48
VPS41-212ENST00000482217 ITGB2P05107 769 aa5.81□□□□□ -1.48
VPS41-212ENST00000482217 EIF2AK2P19525 551 aaKnown RBP5.81□□□□□ -1.48
VPS41-212ENST00000482217 GRM2Q14416 872 aa5.81□□□□□ -1.48
VPS41-212ENST00000482217 HFE2Q6ZVN8 426 aa5.81□□□□□ -1.48
VPS41-212ENST00000482217 CCNJLQ8IV13 435 aa5.81□□□□□ -1.48
VPS41-212ENST00000482217 FAM161BQ96MY7 647 aa5.81□□□□□ -1.48
VPS41-212ENST00000482217 LPIN3Q9BQK8 851 aa5.81□□□□□ -1.48
VPS41-212ENST00000482217 PBX4Q9BYU1 374 aa5.81□□□□□ -1.48
VPS41-212ENST00000482217 OSBPL7Q9BZF2 842 aa5.81□□□□□ -1.48
VPS41-212ENST00000482217 BHLHE41Q9C0J9 482 aaPredicted RBP5.81□□□□□ -1.48
VPS41-212ENST00000482217 LIN7BQ9HAP6 207 aa5.81□□□□□ -1.48
VPS41-212ENST00000482217 ZFYVE1Q9HBF4 777 aa5.81□□□□□ -1.48
VPS41-212ENST00000482217 NFKBIEO00221 500 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 SMNDC1O75940 238 aaKnown RBP eCLIP5.8□□□□□ -1.48
VPS41-212ENST00000482217 APBA3O96018 575 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 XRCC5P13010 732 aaKnown RBP5.8□□□□□ -1.48
VPS41-212ENST00000482217 CPB1P15086 417 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 GSTT1P30711 240 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 AFF1P51825 1210 aaKnown RBP5.8□□□□□ -1.48
VPS41-212ENST00000482217 RAC1P63000 192 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 PERM1Q5SV97 790 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 TRAPPC3LQ5T215 181 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 ELMSAN1Q6PJG2 1045 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 NXPE4Q6UWF7 544 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 C8orf86Q6ZUL3 223 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 ANKRD13AQ8IZ07 590 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 CACTIN-AS1Q8N1I8 211 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 DTWD1Q8N5C7 304 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 GLIS3Q8NEA6 775 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 NUDT8Q8WV74 236 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 PLD4Q96BZ4 506 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 CRELD1Q96HD1 420 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 TCF12Q99081 682 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 RASSF4Q9H2L5 321 aa5.8□□□□□ -1.48
VPS41-212ENST00000482217 LOC102724159A0A0B4J2E5 919 aa5.79□□□□□ -1.48
VPS41-212ENST00000482217 C1QTNF9BB2RNN3 333 aa5.79□□□□□ -1.48
VPS41-212ENST00000482217 PDE2AO00408 941 aaPredicted RBP5.79□□□□□ -1.48
VPS41-212ENST00000482217 RECKO95980 971 aa5.79□□□□□ -1.48
VPS41-212ENST00000482217 ACPPP15309 386 aa5.79□□□□□ -1.48
VPS41-212ENST00000482217 ELNP15502 786 aa5.79□□□□□ -1.48
VPS41-212ENST00000482217 CANXP27824 592 aaKnown RBP5.79□□□□□ -1.48
VPS41-212ENST00000482217 ATP11AP98196 1134 aa5.79□□□□□ -1.48
VPS41-212ENST00000482217 PTPN12Q05209 780 aaKnown RBP5.79□□□□□ -1.48
VPS41-212ENST00000482217 PWP2Q15269 919 aaKnown RBP5.79□□□□□ -1.48
VPS41-212ENST00000482217 TSNAXIP1Q2TAA8 658 aa5.79□□□□□ -1.48
VPS41-212ENST00000482217 CD163Q86VB7 1156 aa5.79□□□□□ -1.48
VPS41-212ENST00000482217 NXPE3Q969Y0 559 aa5.79□□□□□ -1.48
VPS41-212ENST00000482217 BACH2Q9BYV9 841 aa5.79□□□□□ -1.48
VPS41-212ENST00000482217 TMEM238LA0A1B0GVL6 79 aa5.78□□□□□ -1.48
VPS41-212ENST00000482217 USP17L7P0C7H9 530 aa5.78□□□□□ -1.48
VPS41-212ENST00000482217 MSL1Q68DK7 614 aa5.78□□□□□ -1.48
VPS41-212ENST00000482217 ILDR2Q71H61 639 aa5.78□□□□□ -1.48
VPS41-212ENST00000482217 NOL8Q76FK4 1167 aaKnown RBP5.78□□□□□ -1.48
VPS41-212ENST00000482217 ANKRD24Q8TF21 1146 aa5.78□□□□□ -1.48
VPS41-212ENST00000482217 SMG9Q9H0W8 520 aaKnown RBP5.78□□□□□ -1.48
VPS41-212ENST00000482217 ABCB6Q9NP58 842 aa5.78□□□□□ -1.48
VPS41-212ENST00000482217 PPM1HQ9ULR3 514 aa5.78□□□□□ -1.48
VPS41-212ENST00000482217 RIPOR2Q9Y4F9 1068 aa5.78□□□□□ -1.48
VPS41-212ENST00000482217 A0A0A0MRY4 1105 aa5.77□□□□□ -1.49
VPS41-212ENST00000482217 SCAMP3O14828 347 aaKnown RBP5.77□□□□□ -1.49
VPS41-212ENST00000482217 MARCH6O60337 910 aa5.77□□□□□ -1.49
VPS41-212ENST00000482217 CTSHP09668 335 aa5.77□□□□□ -1.49
VPS41-212ENST00000482217 ITPKAP23677 461 aa5.77□□□□□ -1.49
VPS41-212ENST00000482217 CHRNA4P43681 627 aa5.77□□□□□ -1.49
VPS41-212ENST00000482217 ST13P50502 369 aaKnown RBP5.77□□□□□ -1.49
VPS41-212ENST00000482217 GRIK5Q16478 980 aa5.77□□□□□ -1.49
VPS41-212ENST00000482217 LDLRAD1Q5T700 205 aa5.77□□□□□ -1.49
VPS41-212ENST00000482217 CEP135Q66GS9 1140 aa5.77□□□□□ -1.49
VPS41-212ENST00000482217 TEX2Q8IWB9 1127 aa5.77□□□□□ -1.49
VPS41-212ENST00000482217 TMEM87AQ8NBN3 555 aa5.77□□□□□ -1.49
VPS41-212ENST00000482217 DCAF11Q8TEB1 546 aa5.77□□□□□ -1.49
VPS41-212ENST00000482217 BSNDQ8WZ55 320 aa5.77□□□□□ -1.49
VPS41-212ENST00000482217 POP1Q99575 1024 aaKnown RBP5.77□□□□□ -1.49
VPS41-212ENST00000482217 ADAM19Q9H013 955 aa5.77□□□□□ -1.49
VPS41-212ENST00000482217 SRA1Q9HD15 236 aaKnown RBP5.77□□□□□ -1.49
VPS41-212ENST00000482217 METTL5Q9NRN9 209 aaKnown RBP5.77□□□□□ -1.49
VPS41-212ENST00000482217 USP31Q70CQ4 1352 aa5.77□□□□□ -1.49
VPS41-212ENST00000482217 A0A096LPE4 126 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 A0A1W2PPZ6 126 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 ANKRD62A6NC57 917 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 FAM177BA6PVY3 158 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 C9orf172C9J069 976 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 TRPA1O75762 1119 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 TCF3P15923 654 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 PTPRAP18433 802 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 GATA4P43694 442 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 BAG6P46379 1132 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 GRIA4P48058 902 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 FCGRTP55899 365 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 NRG1Q02297 640 aaPredicted RBP5.76□□□□□ -1.49
VPS41-212ENST00000482217 TAF1CQ15572 869 aaPredicted RBP5.76□□□□□ -1.49
VPS41-212ENST00000482217 RPS26P11Q5JNZ5 115 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms