RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 A0A1W2PNR3 127 aa7.5□□□□□ -1.21
COPA-203ENST00000481040 DNAJC6O75061 913 aa7.5□□□□□ -1.21
COPA-203ENST00000481040 PF4P02776 101 aa7.5□□□□□ -1.21
COPA-203ENST00000481040 MSX1P28360 303 aa7.5□□□□□ -1.21
COPA-203ENST00000481040 LIG3P49916 1009 aa7.5□□□□□ -1.21
COPA-203ENST00000481040 CHMP4BP1P59074 171 aa7.5□□□□□ -1.21
COPA-203ENST00000481040 SRRTQ9BXP5 876 aaKnown RBP7.5□□□□□ -1.21
COPA-203ENST00000481040 SPC25Q9HBM1 224 aa7.5□□□□□ -1.21
COPA-203ENST00000481040 PCDH12Q9NPG4 1184 aa7.5□□□□□ -1.21
COPA-203ENST00000481040 TLR6Q9Y2C9 796 aa7.5□□□□□ -1.21
COPA-203ENST00000481040 IGF1RP08069 1367 aa7.49□□□□□ -1.21
COPA-203ENST00000481040 CCDC85CA6NKD9 419 aa7.49□□□□□ -1.21
COPA-203ENST00000481040 GDF11O95390 407 aa7.49□□□□□ -1.21
COPA-203ENST00000481040 LMNB2Q03252 620 aa7.49□□□□□ -1.21
COPA-203ENST00000481040 APOBRQ0VD83 1088 aa7.49□□□□□ -1.21
COPA-203ENST00000481040 SNAP47Q5SQN1 464 aa7.49□□□□□ -1.21
COPA-203ENST00000481040 TPTE2Q6XPS3 522 aa7.49□□□□□ -1.21
COPA-203ENST00000481040 TMEM151AQ8N4L1 468 aa7.49□□□□□ -1.21
COPA-203ENST00000481040 GOLM1Q8NBJ4 401 aa7.49□□□□□ -1.21
COPA-203ENST00000481040 NKD1Q969G9 470 aa7.49□□□□□ -1.21
COPA-203ENST00000481040 LIN7BQ9HAP6 207 aa7.49□□□□□ -1.21
COPA-203ENST00000481040 MBIPQ9NS73 344 aa7.49□□□□□ -1.21
COPA-203ENST00000481040 KLHL42Q9P2K6 505 aa7.49□□□□□ -1.21
COPA-203ENST00000481040 SALL4Q9UJQ4 1053 aa7.49□□□□□ -1.21
COPA-203ENST00000481040 GJA3Q9Y6H8 435 aa7.49□□□□□ -1.21
COPA-203ENST00000481040 A0A1B0GTH6 734 aa7.48□□□□□ -1.21
COPA-203ENST00000481040 PPP1R12AO14974 1030 aaPredicted RBP7.48□□□□□ -1.21
COPA-203ENST00000481040 SMAD7O15105 426 aaKnown RBP7.48□□□□□ -1.21
COPA-203ENST00000481040 CELA3AP09093 270 aa7.48□□□□□ -1.21
COPA-203ENST00000481040 CAMK2GQ13555 558 aaPredicted RBP7.48□□□□□ -1.21
COPA-203ENST00000481040 UBAP2LQ14157 1087 aaKnown RBP7.48□□□□□ -1.21
COPA-203ENST00000481040 TNNI3KQ59H18 835 aa7.48□□□□□ -1.21
COPA-203ENST00000481040 SH3TC2Q8TF17 1288 aa7.48□□□□□ -1.21
COPA-203ENST00000481040 ACDQ96AP0 544 aa7.48□□□□□ -1.21
COPA-203ENST00000481040 SHDQ96IW2 340 aa7.48□□□□□ -1.21
COPA-203ENST00000481040 TCF12Q99081 682 aa7.48□□□□□ -1.21
COPA-203ENST00000481040 BRD7Q9NPI1 651 aa7.48□□□□□ -1.21
COPA-203ENST00000481040 TIMMDC1Q9NPL8 285 aa7.48□□□□□ -1.21
COPA-203ENST00000481040 PRKAB1Q9Y478 270 aa7.48□□□□□ -1.21
COPA-203ENST00000481040 PHF20L1A8MW92 1017 aa7.47□□□□□ -1.21
COPA-203ENST00000481040 CDC45O75419 566 aa7.47□□□□□ -1.21
COPA-203ENST00000481040 SASH3O75995 380 aa7.47□□□□□ -1.21
COPA-203ENST00000481040 CRKP46108 304 aa7.47□□□□□ -1.21
COPA-203ENST00000481040 CCDC81Q6ZN84 652 aa7.47□□□□□ -1.21
COPA-203ENST00000481040 SLITRK4Q8IW52 837 aa7.47□□□□□ -1.21
COPA-203ENST00000481040 OR13H1Q8NG92 308 aa7.47□□□□□ -1.21
COPA-203ENST00000481040 GMCL1Q96IK5 515 aa7.47□□□□□ -1.21
COPA-203ENST00000481040 CEP44Q9C0F1 390 aa7.47□□□□□ -1.21
COPA-203ENST00000481040 CCDC113Q9H0I3 377 aa7.47□□□□□ -1.21
COPA-203ENST00000481040 SLKQ9H2G2 1235 aaPredicted RBP7.47□□□□□ -1.21
COPA-203ENST00000481040 ZFYVE1Q9HBF4 777 aa7.47□□□□□ -1.21
COPA-203ENST00000481040 GPAMQ9HCL2 828 aa7.47□□□□□ -1.21
COPA-203ENST00000481040 FANCLQ9NW38 375 aa7.47□□□□□ -1.21
COPA-203ENST00000481040 MSRB2Q9Y3D2 182 aa7.47□□□□□ -1.21
COPA-203ENST00000481040 ARID4BQ4LE39 1312 aaPredicted RBP7.47□□□□□ -1.21
COPA-203ENST00000481040 LOC100996750A0A140TA64 210 aa7.46□□□□□ -1.22
COPA-203ENST00000481040 F11P03951 625 aa7.46□□□□□ -1.22
COPA-203ENST00000481040 GRIN2CQ14957 1233 aa7.46□□□□□ -1.22
COPA-203ENST00000481040 CCNJLQ8IV13 435 aa7.46□□□□□ -1.22
COPA-203ENST00000481040 LILRB2Q8N423 598 aa7.46□□□□□ -1.22
COPA-203ENST00000481040 APPBP2Q92624 585 aa7.46□□□□□ -1.22
COPA-203ENST00000481040 DNAJC7Q99615 494 aa7.46□□□□□ -1.22
COPA-203ENST00000481040 KRTAP4-6Q9BYQ5 205 aa7.46□□□□□ -1.22
COPA-203ENST00000481040 ZCCHC2Q9C0B9 1178 aaKnown RBP7.46□□□□□ -1.22
COPA-203ENST00000481040 NUCKS1Q9H1E3 243 aaKnown RBP7.46□□□□□ -1.22
COPA-203ENST00000481040 KANSL2Q9H9L4 492 aa7.46□□□□□ -1.22
COPA-203ENST00000481040 EIF5BO60841 1220 aaKnown RBP7.45□□□□□ -1.22
COPA-203ENST00000481040 MMP20O60882 483 aa7.45□□□□□ -1.22
COPA-203ENST00000481040 TFE3P19532 575 aaPredicted RBP7.45□□□□□ -1.22
COPA-203ENST00000481040 AGMOQ6ZNB7 445 aa7.45□□□□□ -1.22
COPA-203ENST00000481040 FAM196AQ6ZSG2 479 aa7.45□□□□□ -1.22
COPA-203ENST00000481040 KRT25Q7Z3Z0 450 aa7.45□□□□□ -1.22
COPA-203ENST00000481040 CELF2-AS1Q8N7Q2 184 aa7.45□□□□□ -1.22
COPA-203ENST00000481040 TRPM4Q8TD43 1214 aa7.45□□□□□ -1.22
COPA-203ENST00000481040 TMX1Q9H3N1 280 aa7.45□□□□□ -1.22
COPA-203ENST00000481040 PPT2Q9UMR5 302 aa7.45□□□□□ -1.22
COPA-203ENST00000481040 ROBO2Q9HCK4 1378 aa7.45□□□□□ -1.22
COPA-203ENST00000481040 TARSP26639 723 aaKnown RBP7.44□□□□□ -1.22
COPA-203ENST00000481040 EIF6P56537 245 aaKnown RBP7.44□□□□□ -1.22
COPA-203ENST00000481040 KCNQ4P56696 695 aa7.44□□□□□ -1.22
COPA-203ENST00000481040 IFRD2Q12894 506 aaPredicted RBP7.44□□□□□ -1.22
COPA-203ENST00000481040 SEZ6Q53EL9 994 aa7.44□□□□□ -1.22
COPA-203ENST00000481040 SAMD5Q5TGI4 173 aa7.44□□□□□ -1.22
COPA-203ENST00000481040 TTBK2Q6IQ55 1244 aa7.44□□□□□ -1.22
COPA-203ENST00000481040 HOMER1Q86YM7 354 aa7.44□□□□□ -1.22
COPA-203ENST00000481040 FAM169BQ8N8A8 192 aa7.44□□□□□ -1.22
COPA-203ENST00000481040 OSMRQ99650 979 aa7.44□□□□□ -1.22
COPA-203ENST00000481040 ZKSCAN3Q9BRR0 538 aa7.44□□□□□ -1.22
COPA-203ENST00000481040 CRISPLD1Q9H336 500 aa7.44□□□□□ -1.22
COPA-203ENST00000481040 KCNH4Q9UQ05 1017 aa7.44□□□□□ -1.22
COPA-203ENST00000481040 ESYT3A0FGR9 886 aa7.43□□□□□ -1.22
COPA-203ENST00000481040 H7C1W4 665 aa7.43□□□□□ -1.22
COPA-203ENST00000481040 RNF225M0QZC1 329 aaPredicted RBP7.43□□□□□ -1.22
COPA-203ENST00000481040 ENC1O14682 589 aa7.43□□□□□ -1.22
COPA-203ENST00000481040 GIPRP48546 466 aa7.43□□□□□ -1.22
COPA-203ENST00000481040 CCINQ13939 588 aa7.43□□□□□ -1.22
COPA-203ENST00000481040 SUZ12Q15022 739 aaKnown RBP7.43□□□□□ -1.22
COPA-203ENST00000481040 DDR2Q16832 855 aa7.43□□□□□ -1.22
COPA-203ENST00000481040 ARSHQ5FYA8 562 aa7.43□□□□□ -1.22
COPA-203ENST00000481040 RPUSD2Q8IZ73 545 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms