RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	TXNRD3	Q86VQ6	643 aa		6.26	□□□□□ -1.41
HDAC6-223	ENST00000480525	SMC5	Q8IY18	1101 aa		6.26	□□□□□ -1.41
HDAC6-223	ENST00000480525	CLASRP	Q8N2M8	674 aa	Known RBP	6.26	□□□□□ -1.41
HDAC6-223	ENST00000480525	OGFOD1	Q8N543	542 aa		6.26	□□□□□ -1.41
HDAC6-223	ENST00000480525	RHPN1	Q8TCX5	695 aa		6.26	□□□□□ -1.41
HDAC6-223	ENST00000480525	ZBED3	Q96IU2	234 aa	Predicted RBP	6.26	□□□□□ -1.41
HDAC6-223	ENST00000480525	YTHDC1	Q96MU7	727 aa	Known RBP	6.26	□□□□□ -1.41
HDAC6-223	ENST00000480525	CCDC85A	Q96PX6	553 aa	Predicted RBP	6.26	□□□□□ -1.41
HDAC6-223	ENST00000480525	TAF1D	Q9H5J8	278 aa	Predicted RBP	6.26	□□□□□ -1.41
HDAC6-223	ENST00000480525	PPP2R3B	Q9Y5P8	575 aa		6.26	□□□□□ -1.41
HDAC6-223	ENST00000480525	FPGT-TNNI3K	V9GXZ4	949 aa		6.26	□□□□□ -1.41
HDAC6-223	ENST00000480525	RPAP1	Q9BWH6	1393 aa	Predicted RBP	6.26	□□□□□ -1.41
HDAC6-223	ENST00000480525	CDK5RAP2	Q96SN8	1893 aa		6.26	□□□□□ -1.41
HDAC6-223	ENST00000480525		G3V3G9	751 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525		H7C1D1	291 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	PSMD14	O00487	310 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	TAF5L	O75529	589 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	DDN	O94850	711 aa	Predicted RBP	6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	EPHX2	P34913	555 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	TFCP2	Q12800	502 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	CCDC158	Q5M9N0	1113 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	DCAF8	Q5TAQ9	597 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	SPTY2D1	Q68D10	685 aa	Predicted RBP	6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	CCDC102B	Q68D86	513 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	HHIPL2	Q6UWX4	724 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	VPS37D	Q86XT2	251 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	SLF2	Q8IX21	1173 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	SMC1B	Q8NDV3	1235 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	KLHDC4	Q8TBB5	520 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	HHIPL1	Q96JK4	782 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	LRRCC1	Q9C099	1032 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	DBNDD1	Q9H9R9	158 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	ZNF219	Q9P2Y4	722 aa	Predicted RBP	6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	HDAC9	Q9UKV0	1011 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	MYO5A	Q9Y4I1	1855 aa	Known RBP	6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	AK9	Q5TCS8	1911 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	THSD7B	Q9C0I4	1608 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	AOX1	Q06278	1338 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	TTC41P	Q6P2S7	1318 aa		6.25	□□□□□ -1.41
HDAC6-223	ENST00000480525	PAPPA2	Q9BXP8	1791 aa		6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	RFX7	Q2KHR2	1363 aa		6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	CENPB	P07199	599 aa	Predicted RBP	6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	KLRK1	P26718	216 aa		6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	GMPS	P49915	693 aa	Predicted RBP	6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	FKBP1B	P68106	108 aa		6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	TTF1	Q15361	905 aa	Predicted RBP	6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	MFSD14B	Q5SR56	506 aa		6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	CHADL	Q6NUI6	762 aa		6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	XAGE2	Q96GT9	111 aa		6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	ZDHHC15	Q96MV8	337 aa		6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	RWDD1	Q9H446	243 aa	Predicted RBP	6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	OSBPL3	Q9H4L5	887 aa		6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	CNOT7	Q9UIV1	285 aa	Known RBP	6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	PA2G4	Q9UQ80	394 aa	Known RBP	6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	PCDHB15	Q9Y5E8	787 aa		6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	GAK	O14976	1311 aa		6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	PASK	Q96RG2	1323 aa		6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	SALL3	Q9BXA9	1300 aa		6.24	□□□□□ -1.41
HDAC6-223	ENST00000480525	DDX60L	Q5H9U9	1706 aa	Known RBP	6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	RAD17	O75943	681 aa		6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	ATP5J	P18859	108 aa		6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	GYG1	P46976	350 aa		6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	GTF2I	P78347	998 aa		6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	TNFAIP1	Q13829	316 aa		6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	RASGRF1	Q13972	1273 aa		6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	CDC37L1	Q7L3B6	337 aa		6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	FAM83A	Q86UY5	434 aa		6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	APOBEC3F	Q8IUX4	373 aa	Known RBP	6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	MICALL2	Q8IY33	904 aa		6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	C16orf71	Q8IYS4	520 aa	Predicted RBP	6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	SPATA5	Q8NB90	893 aa		6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	HELB	Q8NG08	1087 aa	Predicted RBP	6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	EAF2	Q96CJ1	260 aa	Predicted RBP	6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	GPATCH3	Q96I76	525 aa		6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	SIL1	Q9H173	461 aa		6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	MYOZ2	Q9NPC6	264 aa		6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	NMRK2	Q9NPI5	230 aa		6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	STAP2	Q9UGK3	403 aa		6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	DBNL	Q9UJU6	430 aa	Known RBP	6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	WWC3	Q9ULE0	1092 aa		6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	SUPT16H	Q9Y5B9	1047 aa	Known RBP	6.23	□□□□□ -1.41
HDAC6-223	ENST00000480525	SPDYE2B	A6NHP3	402 aa		6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	WNT10B	O00744	389 aa		6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	RIMBP2	O15034	1052 aa		6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	MYO1B	O43795	1136 aa		6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	ITGBL1	O95965	494 aa	Predicted RBP	6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	LDHC	P07864	332 aa		6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	SPDYE6	P0CI01	402 aa		6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	PHKA1	P46020	1223 aa		6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	BCAM	P50895	628 aa		6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	PPP4C	P60510	307 aa		6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	TIMM10	P62072	90 aa		6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	GSTO1	P78417	241 aa		6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	OS9	Q13438	667 aa	Predicted RBP	6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	DOK7	Q18PE1	504 aa		6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	KIF4B	Q2VIQ3	1234 aa		6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	LRRFIP1	Q32MZ4	808 aa	Known RBP	6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	SLC51A	Q86UW1	340 aa		6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	CERS5	Q8N5B7	392 aa		6.22	□□□□□ -1.41
HDAC6-223	ENST00000480525	TEKT1	Q969V4	418 aa		6.22	□□□□□ -1.41

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