RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 MICALL2Q8IY33 904 aa15.28■□□□□ 0.04
DDX56-209ENST00000473924 RHPN1Q8TCX5 695 aa15.28■□□□□ 0.04
DDX56-209ENST00000473924 MXD3Q9BW11 206 aa15.28■□□□□ 0.04
DDX56-209ENST00000473924 TAF1DQ9H5J8 278 aaPredicted RBP15.28■□□□□ 0.04
DDX56-209ENST00000473924 ARAP2Q8WZ64 1704 aa15.27■□□□□ 0.04
DDX56-209ENST00000473924 CCDC102BQ68D86 513 aa15.27■□□□□ 0.04
DDX56-209ENST00000473924 PNMA8AQ86V59 439 aaPredicted RBP15.27■□□□□ 0.04
DDX56-209ENST00000473924 IL1RAPL2Q9NP60 686 aa15.27■□□□□ 0.04
DDX56-209ENST00000473924 ADARB2Q9NS39 739 aaKnown RBP15.27■□□□□ 0.04
DDX56-209ENST00000473924 FAM205AQ6ZU69 1335 aa15.26■□□□□ 0.03
DDX56-209ENST00000473924 USP17L8P0C7I0 530 aa15.26■□□□□ 0.03
DDX56-209ENST00000473924 PHKA1P46020 1223 aa15.26■□□□□ 0.03
DDX56-209ENST00000473924 AACSQ86V21 672 aa15.26■□□□□ 0.03
DDX56-209ENST00000473924 CLASRPQ8N2M8 674 aaKnown RBP15.26■□□□□ 0.03
DDX56-209ENST00000473924 OGFOD1Q8N543 542 aa15.26■□□□□ 0.03
DDX56-209ENST00000473924 CLEC11AQ9Y240 323 aa15.26■□□□□ 0.03
DDX56-209ENST00000473924 TOMM70O94826 608 aa15.25■□□□□ 0.03
DDX56-209ENST00000473924 FKBP1AP62942 108 aaKnown RBP15.25■□□□□ 0.03
DDX56-209ENST00000473924 CCDC158Q5M9N0 1113 aa15.25■□□□□ 0.03
DDX56-209ENST00000473924 MFSD14BQ5SR56 506 aa15.25■□□□□ 0.03
DDX56-209ENST00000473924 RBM26Q5T8P6 1007 aaKnown RBP15.25■□□□□ 0.03
DDX56-209ENST00000473924 USP50Q70EL3 339 aaPredicted RBP15.25■□□□□ 0.03
DDX56-209ENST00000473924 KIAA0825Q8IV33 1275 aa15.25■□□□□ 0.03
DDX56-209ENST00000473924 TBC1D22AQ8WUA7 517 aa15.25■□□□□ 0.03
DDX56-209ENST00000473924 LRRCC1Q9C099 1032 aa15.25■□□□□ 0.03
DDX56-209ENST00000473924 CCDC8Q9H0W5 538 aaPredicted RBP15.25■□□□□ 0.03
DDX56-209ENST00000473924 DCTPP1Q9H773 170 aa15.25■□□□□ 0.03
DDX56-209ENST00000473924 HDAC9Q9UKV0 1011 aa15.25■□□□□ 0.03
DDX56-209ENST00000473924 DENND2AQ9ULE3 1009 aa15.25■□□□□ 0.03
DDX56-209ENST00000473924 MYH13Q9UKX3 1938 aa15.24■□□□□ 0.03
DDX56-209ENST00000473924 SHTN1A0MZ66 631 aa15.24■□□□□ 0.03
DDX56-209ENST00000473924 F8W031 263 aaPredicted RBP15.24■□□□□ 0.03
DDX56-209ENST00000473924 SEMA3EO15041 775 aa15.24■□□□□ 0.03
DDX56-209ENST00000473924 TTC39AQ5SRH9 613 aa15.24■□□□□ 0.03
DDX56-209ENST00000473924 WDR66Q8TBY9 1149 aa15.24■□□□□ 0.03
DDX56-209ENST00000473924 EAF2Q96CJ1 260 aaPredicted RBP15.24■□□□□ 0.03
DDX56-209ENST00000473924 GMLQ99445 158 aa15.24■□□□□ 0.03
DDX56-209ENST00000473924 DBNDD2Q9BQY9 259 aa15.24■□□□□ 0.03
DDX56-209ENST00000473924 ZNF646O15015 1829 aaPredicted RBP15.23■□□□□ 0.03
DDX56-209ENST00000473924 IFIT2P09913 472 aaKnown RBP15.23■□□□□ 0.03
DDX56-209ENST00000473924 UQCRFS1P1P0C7P4 283 aa15.23■□□□□ 0.03
DDX56-209ENST00000473924 TBC1D10BQ4KMP7 808 aaPredicted RBP15.23■□□□□ 0.03
DDX56-209ENST00000473924 SAMD7Q7Z3H4 446 aa15.23■□□□□ 0.03
DDX56-209ENST00000473924 CERS5Q8N5B7 392 aa15.23■□□□□ 0.03
DDX56-209ENST00000473924 RWDD1Q9H446 243 aaPredicted RBP15.23■□□□□ 0.03
DDX56-209ENST00000473924 TLR7Q9NYK1 1049 aaKnown RBP15.23■□□□□ 0.03
DDX56-209ENST00000473924 DBNLQ9UJU6 430 aaKnown RBP15.23■□□□□ 0.03
DDX56-209ENST00000473924 POTEIP0CG38 1075 aa15.22■□□□□ 0.03
DDX56-209ENST00000473924 POTEJP0CG39 1038 aa15.22■□□□□ 0.03
DDX56-209ENST00000473924 MMP14P50281 582 aa15.22■□□□□ 0.03
DDX56-209ENST00000473924 ZNF280AP59817 542 aaPredicted RBP15.22■□□□□ 0.03
DDX56-209ENST00000473924 HDAC1Q13547 482 aaPredicted RBP15.22■□□□□ 0.03
DDX56-209ENST00000473924 RASGRF1Q13972 1273 aa15.22■□□□□ 0.03
DDX56-209ENST00000473924 KIF4BQ2VIQ3 1234 aa15.22■□□□□ 0.03
DDX56-209ENST00000473924 LDHDQ86WU2 507 aa15.22■□□□□ 0.03
DDX56-209ENST00000473924 RBM46Q8TBY0 533 aaKnown RBP15.22■□□□□ 0.03
DDX56-209ENST00000473924 TRPM4Q8TD43 1214 aa15.22■□□□□ 0.03
DDX56-209ENST00000473924 MYOZ2Q9NPC6 264 aa15.22■□□□□ 0.03
DDX56-209ENST00000473924 ZBTB47Q9UFB7 747 aaPredicted RBP15.22■□□□□ 0.03
DDX56-209ENST00000473924 SMARCA5O60264 1052 aaPredicted RBP15.21■□□□□ 0.03
DDX56-209ENST00000473924 ARID4AP29374 1257 aaPredicted RBP15.21■□□□□ 0.03
DDX56-209ENST00000473924 SMC1BQ8NDV3 1235 aa15.21■□□□□ 0.03
DDX56-209ENST00000473924 TTF2Q9UNY4 1162 aaKnown RBP15.21■□□□□ 0.03
DDX56-209ENST00000473924 RBM5P52756 815 aaKnown RBP eCLIP15.2■□□□□ 0.02
DDX56-209ENST00000473924 CHADLQ6NUI6 762 aa15.2■□□□□ 0.02
DDX56-209ENST00000473924 ZGPATQ8N5A5 531 aaKnown RBP15.2■□□□□ 0.02
DDX56-209ENST00000473924 SPATA5Q8NB90 893 aa15.2■□□□□ 0.02
DDX56-209ENST00000473924 GCC1Q96CN9 775 aa15.2■□□□□ 0.02
DDX56-209ENST00000473924 HMG20BQ9P0W2 317 aa15.2■□□□□ 0.02
DDX56-209ENST00000473924 COL1A1P02452 1464 aaPredicted RBP15.2■□□□□ 0.02
DDX56-209ENST00000473924 ZBTB22O15209 634 aa15.19■□□□□ 0.02
DDX56-209ENST00000473924 EGFRP00533 1210 aa15.19■□□□□ 0.02
DDX56-209ENST00000473924 NEFLP07196 543 aa15.19■□□□□ 0.02
DDX56-209ENST00000473924 MCAMP43121 646 aa15.19■□□□□ 0.02
DDX56-209ENST00000473924 HIRAP54198 1017 aaPredicted RBP15.19■□□□□ 0.02
DDX56-209ENST00000473924 ABCF2Q9UG63 623 aa15.19■□□□□ 0.02
DDX56-209ENST00000473924 SUGT1Q9Y2Z0 365 aa15.19■□□□□ 0.02
DDX56-209ENST00000473924 MAST3O60307 1309 aa15.18■□□□□ 0.02
DDX56-209ENST00000473924 PDS5AQ29RF7 1337 aaKnown RBP15.18■□□□□ 0.02
DDX56-209ENST00000473924 LDHBP07195 334 aaKnown RBP15.18■□□□□ 0.02
DDX56-209ENST00000473924 FSTL1Q12841 308 aa15.18■□□□□ 0.02
DDX56-209ENST00000473924 SCARF1Q14162 830 aa15.18■□□□□ 0.02
DDX56-209ENST00000473924 DLGAP5Q15398 846 aa15.18■□□□□ 0.02
DDX56-209ENST00000473924 ANKRD45Q5TZF3 282 aa15.18■□□□□ 0.02
DDX56-209ENST00000473924 MAP1SQ66K74 1059 aaPredicted RBP15.18■□□□□ 0.02
DDX56-209ENST00000473924 SPTY2D1Q68D10 685 aaPredicted RBP15.18■□□□□ 0.02
DDX56-209ENST00000473924 PI16Q6UXB8 463 aa15.18■□□□□ 0.02
DDX56-209ENST00000473924 ZC3H15Q8WU90 426 aaKnown RBP15.18■□□□□ 0.02
DDX56-209ENST00000473924 ZNF512BQ96KM6 892 aaPredicted RBP15.18■□□□□ 0.02
DDX56-209ENST00000473924 SNRKQ9NRH2 765 aa15.18■□□□□ 0.02
DDX56-209ENST00000473924 SALL1Q9NSC2 1324 aa15.17■□□□□ 0.02
DDX56-209ENST00000473924 PRDX5P30044 214 aa15.17■□□□□ 0.02
DDX56-209ENST00000473924 C1QTNF8P60827 252 aa15.17■□□□□ 0.02
DDX56-209ENST00000473924 GRIK5Q16478 980 aa15.17■□□□□ 0.02
DDX56-209ENST00000473924 CFAP100Q494V2 611 aa15.17■□□□□ 0.02
DDX56-209ENST00000473924 DCPSQ96C86 337 aaKnown RBP15.17■□□□□ 0.02
DDX56-209ENST00000473924 SERPINA10Q9UK55 444 aa15.17■□□□□ 0.02
DDX56-209ENST00000473924 ADAMTSL1Q8N6G6 1762 aa15.16■□□□□ 0.02
DDX56-209ENST00000473924 WNT10BO00744 389 aa15.16■□□□□ 0.02
DDX56-209ENST00000473924 IGHDP01880 384 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms