RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 DDX17Q92841 729 aaKnown RBP16.3■□□□□ 0.2
ABCF3-210ENST00000473311 ERCC4Q92889 916 aaPredicted RBP16.3■□□□□ 0.2
ABCF3-210ENST00000473311 MRFAP1L1Q96HT8 127 aa16.3■□□□□ 0.2
ABCF3-210ENST00000473311 ANO10Q9NW15 660 aa16.3■□□□□ 0.2
ABCF3-210ENST00000473311 SALL1Q9NSC2 1324 aa16.29■□□□□ 0.2
ABCF3-210ENST00000473311 ARID5BQ14865 1188 aa16.29■□□□□ 0.2
ABCF3-210ENST00000473311 TTLL5Q6EMB2 1281 aa16.29■□□□□ 0.2
ABCF3-210ENST00000473311 ZNF274Q96GC6 653 aaPredicted RBP16.29■□□□□ 0.2
ABCF3-210ENST00000473311 GPR108Q9NPR9 543 aa16.29■□□□□ 0.2
ABCF3-210ENST00000473311 CARMIL3Q8ND23 1372 aa16.29■□□□□ 0.2
ABCF3-210ENST00000473311 A0A1B0GUL7 405 aa16.29■□□□□ 0.2
ABCF3-210ENST00000473311 RNF113AO15541 343 aaKnown RBP16.29■□□□□ 0.2
ABCF3-210ENST00000473311 FILIP1Q7Z7B0 1213 aa16.29■□□□□ 0.2
ABCF3-210ENST00000473311 ENGASEQ8NFI3 743 aa16.29■□□□□ 0.2
ABCF3-210ENST00000473311 ZNF592Q92610 1267 aa16.29■□□□□ 0.2
ABCF3-210ENST00000473311 NBPF26B4DH59 902 aa16.28■□□□□ 0.2
ABCF3-210ENST00000473311 NBPF14Q5TI25 921 aa16.28■□□□□ 0.2
ABCF3-210ENST00000473311 NBPF10Q6P3W6 841 aaKnown RBP16.28■□□□□ 0.2
ABCF3-210ENST00000473311 ILDR1Q86SU0 546 aaPredicted RBP16.28■□□□□ 0.2
ABCF3-210ENST00000473311 CEP57L1Q8IYX8 460 aa16.28■□□□□ 0.2
ABCF3-210ENST00000473311 NBPF15Q8N660 670 aa16.28■□□□□ 0.2
ABCF3-210ENST00000473311 CCDC112Q8NEF3 446 aa16.28■□□□□ 0.2
ABCF3-210ENST00000473311 ALS2Q96Q42 1657 aa16.28■□□□□ 0.2
ABCF3-210ENST00000473311 M0R2C6 588 aa16.27■□□□□ 0.2
ABCF3-210ENST00000473311 EYA2O00167 538 aa16.27■□□□□ 0.2
ABCF3-210ENST00000473311 CAPN2P17655 700 aa16.27■□□□□ 0.2
ABCF3-210ENST00000473311 FKBP4Q02790 459 aaKnown RBP eCLIP16.27■□□□□ 0.2
ABCF3-210ENST00000473311 NCBP1Q09161 790 aaKnown RBP16.27■□□□□ 0.2
ABCF3-210ENST00000473311 DHX40Q8IX18 779 aaKnown RBP16.27■□□□□ 0.2
ABCF3-210ENST00000473311 AOPEPQ8N6M6 819 aa16.27■□□□□ 0.2
ABCF3-210ENST00000473311 MRPS27Q92552 414 aaKnown RBP16.27■□□□□ 0.2
ABCF3-210ENST00000473311 SDF4Q9BRK5 362 aa16.27■□□□□ 0.2
ABCF3-210ENST00000473311 PAXBP1Q9Y5B6 917 aa16.27■□□□□ 0.2
ABCF3-210ENST00000473311 ZBTB3Q9H5J0 574 aa16.27■□□□□ 0.2
ABCF3-210ENST00000473311 PCDHA7Q9UN72 937 aa16.27■□□□□ 0.2
ABCF3-210ENST00000473311 NEMFO60524 1076 aa16.27■□□□□ 0.19
ABCF3-210ENST00000473311 TNNT3P45378 269 aaPredicted RBP16.27■□□□□ 0.19
ABCF3-210ENST00000473311 HAND2P61296 217 aa16.27■□□□□ 0.19
ABCF3-210ENST00000473311 CHMP4CQ96CF2 233 aa16.27■□□□□ 0.19
ABCF3-210ENST00000473311 GPHNQ9NQX3 736 aaPredicted RBP16.27■□□□□ 0.19
ABCF3-210ENST00000473311 LAMB4A4D0S4 1761 aa16.26■□□□□ 0.19
ABCF3-210ENST00000473311 A0A1B0GVL5 298 aa16.26■□□□□ 0.19
ABCF3-210ENST00000473311 SKILP12757 684 aa16.26■□□□□ 0.19
ABCF3-210ENST00000473311 FDPSP14324 419 aaKnown RBP16.26■□□□□ 0.19
ABCF3-210ENST00000473311 SF3A1Q15459 793 aaKnown RBP16.26■□□□□ 0.19
ABCF3-210ENST00000473311 CEP135Q66GS9 1140 aa16.26■□□□□ 0.19
ABCF3-210ENST00000473311 OTUD7BQ6GQQ9 843 aa16.26■□□□□ 0.19
ABCF3-210ENST00000473311 OSBP2Q969R2 916 aa16.26■□□□□ 0.19
ABCF3-210ENST00000473311 PUS3Q9BZE2 481 aaKnown RBP16.26■□□□□ 0.19
ABCF3-210ENST00000473311 C19orf44Q9H6X5 657 aa16.26■□□□□ 0.19
ABCF3-210ENST00000473311 WASHC4Q2M389 1173 aa16.26■□□□□ 0.19
ABCF3-210ENST00000473311 GORABQ5T7V8 394 aa16.26■□□□□ 0.19
ABCF3-210ENST00000473311 NAT10Q9H0A0 1025 aaKnown RBP16.26■□□□□ 0.19
ABCF3-210ENST00000473311 CCDC69A6NI79 296 aa16.25■□□□□ 0.19
ABCF3-210ENST00000473311 USP27XA6NNY8 438 aa16.25■□□□□ 0.19
ABCF3-210ENST00000473311 POLR3DP05423 398 aaPredicted RBP16.25■□□□□ 0.19
ABCF3-210ENST00000473311 STK38Q15208 465 aa16.25■□□□□ 0.19
ABCF3-210ENST00000473311 ZRSR1Q15695 479 aaKnown RBP16.25■□□□□ 0.19
ABCF3-210ENST00000473311 A1BGP04217 495 aa16.25■□□□□ 0.19
ABCF3-210ENST00000473311 TICAM2Q86XR7 235 aa16.25■□□□□ 0.19
ABCF3-210ENST00000473311 FMR1NBQ8N0W7 255 aaPredicted RBP16.25■□□□□ 0.19
ABCF3-210ENST00000473311 ZNF622Q969S3 477 aaKnown RBP eCLIP16.25■□□□□ 0.19
ABCF3-210ENST00000473311 CEP126Q9P2H0 1117 aa16.25■□□□□ 0.19
ABCF3-210ENST00000473311 RBM6P78332 1123 aaKnown RBP16.24■□□□□ 0.19
ABCF3-210ENST00000473311 ADALQ6DHV7 355 aa16.24■□□□□ 0.19
ABCF3-210ENST00000473311 C8orf76Q96K31 380 aa16.24■□□□□ 0.19
ABCF3-210ENST00000473311 RTEL1Q9NZ71 1219 aa16.24■□□□□ 0.19
ABCF3-210ENST00000473311 MST1RQ04912 1400 aa16.24■□□□□ 0.19
ABCF3-210ENST00000473311 IMMTQ16891 758 aaKnown RBP16.24■□□□□ 0.19
ABCF3-210ENST00000473311 TTC39AQ5SRH9 613 aa16.24■□□□□ 0.19
ABCF3-210ENST00000473311 NDUFA8P51970 172 aa16.23■□□□□ 0.19
ABCF3-210ENST00000473311 NAA30Q147X3 362 aaPredicted RBP16.23■□□□□ 0.19
ABCF3-210ENST00000473311 PTPN14Q15678 1187 aa16.23■□□□□ 0.19
ABCF3-210ENST00000473311 CCDC158Q5M9N0 1113 aa16.23■□□□□ 0.19
ABCF3-210ENST00000473311 RAB11FIP4Q86YS3 637 aa16.23■□□□□ 0.19
ABCF3-210ENST00000473311 CCDC191Q8NCU4 936 aa16.23■□□□□ 0.19
ABCF3-210ENST00000473311 CLIC4Q9Y696 253 aa16.23■□□□□ 0.19
ABCF3-210ENST00000473311 GLI3P10071 1580 aa16.23■□□□□ 0.19
ABCF3-210ENST00000473311 COL18A1P39060 1754 aa16.23■□□□□ 0.19
ABCF3-210ENST00000473311 KLF18A0A0U1RQI7 1052 aa16.23■□□□□ 0.19
ABCF3-210ENST00000473311 LRRFIP1Q32MZ4 808 aaKnown RBP16.23■□□□□ 0.19
ABCF3-210ENST00000473311 LINC00301Q8NCQ3 95 aa16.23■□□□□ 0.19
ABCF3-210ENST00000473311 TRMT1Q9NXH9 659 aaKnown RBP16.23■□□□□ 0.19
ABCF3-210ENST00000473311 FEZ2Q9UHY8 353 aaPredicted RBP16.23■□□□□ 0.19
ABCF3-210ENST00000473311 PKD1L3Q7Z443 1732 aa16.23■□□□□ 0.19
ABCF3-210ENST00000473311 GOLGA8BA8MQT2 603 aa16.23■□□□□ 0.19
ABCF3-210ENST00000473311 ATF3P18847 181 aa16.23■□□□□ 0.19
ABCF3-210ENST00000473311 TRHP20396 242 aaPredicted RBP16.23■□□□□ 0.19
ABCF3-210ENST00000473311 CCZ1BP86790 482 aa16.23■□□□□ 0.19
ABCF3-210ENST00000473311 CCZ1P86791 482 aaPredicted RBP16.23■□□□□ 0.19
ABCF3-210ENST00000473311 HSP90AB3PQ58FF7 597 aa16.23■□□□□ 0.19
ABCF3-210ENST00000473311 KIF18AQ8NI77 898 aa16.23■□□□□ 0.19
ABCF3-210ENST00000473311 ORC3Q9UBD5 711 aaPredicted RBP16.23■□□□□ 0.19
ABCF3-210ENST00000473311 TJP1Q07157 1748 aa16.22■□□□□ 0.19
ABCF3-210ENST00000473311 CPLX1O14810 134 aa16.22■□□□□ 0.19
ABCF3-210ENST00000473311 PRC1O43663 620 aa16.22■□□□□ 0.19
ABCF3-210ENST00000473311 CIAO1O76071 339 aa16.22■□□□□ 0.19
ABCF3-210ENST00000473311 ABCC6O95255 1503 aa16.22■□□□□ 0.19
ABCF3-210ENST00000473311 SPEF2Q9C093 1822 aa16.22■□□□□ 0.19
ABCF3-210ENST00000473311 A0A1W2PQ27 194 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms