RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 TMEM57Q8N5G2 664 aa8.33□□□□□ -1.08
VAMP3-202ENST00000470357 HELBQ8NG08 1087 aaPredicted RBP8.33□□□□□ -1.08
VAMP3-202ENST00000470357 USP16Q9Y5T5 823 aa8.33□□□□□ -1.08
VAMP3-202ENST00000470357 IBTKQ9P2D0 1353 aaPredicted RBP8.33□□□□□ -1.08
VAMP3-202ENST00000470357 ARFGEF2Q9Y6D5 1785 aa8.33□□□□□ -1.08
VAMP3-202ENST00000470357 UBR3Q6ZT12 1888 aa8.32□□□□□ -1.08
VAMP3-202ENST00000470357 KIAA1551Q9HCM1 1747 aa8.32□□□□□ -1.08
VAMP3-202ENST00000470357 AFDNP55196 1824 aaKnown RBP8.32□□□□□ -1.08
VAMP3-202ENST00000470357 LOC102724428A0A0B4J2F2 783 aa8.32□□□□□ -1.08
VAMP3-202ENST00000470357 SSFA2P28290 1259 aa8.32□□□□□ -1.08
VAMP3-202ENST00000470357 SIK1P57059 783 aa8.32□□□□□ -1.08
VAMP3-202ENST00000470357 NEXNQ0ZGT2 675 aa8.32□□□□□ -1.08
VAMP3-202ENST00000470357 FOXC1Q12948 553 aa8.32□□□□□ -1.08
VAMP3-202ENST00000470357 KSR2Q6VAB6 950 aa8.32□□□□□ -1.08
VAMP3-202ENST00000470357 TRIM67Q6ZTA4 783 aa8.32□□□□□ -1.08
VAMP3-202ENST00000470357 G2E3Q7L622 706 aa8.32□□□□□ -1.08
VAMP3-202ENST00000470357 LINC00116Q8NCU8 138 aa8.32□□□□□ -1.08
VAMP3-202ENST00000470357 DNAAF4Q8WXU2 420 aa8.32□□□□□ -1.08
VAMP3-202ENST00000470357 PDZRN3Q9UPQ7 1066 aa8.32□□□□□ -1.08
VAMP3-202ENST00000470357 PRAMEF22A3QJZ6 481 aa8.31□□□□□ -1.08
VAMP3-202ENST00000470357 AP1G2O75843 785 aa8.31□□□□□ -1.08
VAMP3-202ENST00000470357 GNAI3P08754 354 aa8.31□□□□□ -1.08
VAMP3-202ENST00000470357 PRELPP51888 382 aa8.31□□□□□ -1.08
VAMP3-202ENST00000470357 TGFB2P61812 414 aa8.31□□□□□ -1.08
VAMP3-202ENST00000470357 ITPK1Q13572 414 aa8.31□□□□□ -1.08
VAMP3-202ENST00000470357 SLC4A10Q6U841 1118 aa8.31□□□□□ -1.08
VAMP3-202ENST00000470357 SRCIN1Q9C0H9 1055 aa8.31□□□□□ -1.08
VAMP3-202ENST00000470357 PHAXQ9H814 394 aaKnown RBP8.31□□□□□ -1.08
VAMP3-202ENST00000470357 MAP10Q9P2G4 905 aa8.31□□□□□ -1.08
VAMP3-202ENST00000470357 WDR90Q96KV7 1748 aa8.31□□□□□ -1.08
VAMP3-202ENST00000470357 KIF13BQ9NQT8 1826 aa8.31□□□□□ -1.08
VAMP3-202ENST00000470357 A0A0G2JLW4 131 aa8.3□□□□□ -1.08
VAMP3-202ENST00000470357 PI4KAP2A4QPH2 592 aa8.3□□□□□ -1.08
VAMP3-202ENST00000470357 TNFRSF10AO00220 468 aa8.3□□□□□ -1.08
VAMP3-202ENST00000470357 ALDH1L1O75891 902 aa8.3□□□□□ -1.08
VAMP3-202ENST00000470357 MMP10P09238 476 aa8.3□□□□□ -1.08
VAMP3-202ENST00000470357 CYP19A1P11511 503 aaPredicted RBP8.3□□□□□ -1.08
VAMP3-202ENST00000470357 MYL6BP14649 208 aa8.3□□□□□ -1.08
VAMP3-202ENST00000470357 KCNA3P22001 575 aa8.3□□□□□ -1.08
VAMP3-202ENST00000470357 IL6STP40189 918 aaPredicted RBP8.3□□□□□ -1.08
VAMP3-202ENST00000470357 RFC5P40937 340 aa8.3□□□□□ -1.08
VAMP3-202ENST00000470357 DNAJC10Q8IXB1 793 aa8.3□□□□□ -1.08
VAMP3-202ENST00000470357 PI4KAP1Q8N8J0 262 aa8.3□□□□□ -1.08
VAMP3-202ENST00000470357 LINS1Q8NG48 757 aa8.3□□□□□ -1.08
VAMP3-202ENST00000470357 PLBD2Q8NHP8 589 aa8.3□□□□□ -1.08
VAMP3-202ENST00000470357 UNC93B1Q9H1C4 597 aa8.3□□□□□ -1.08
VAMP3-202ENST00000470357 ZBTB40Q9NUA8 1239 aa8.3□□□□□ -1.08
VAMP3-202ENST00000470357 PKD2L1Q9P0L9 805 aa8.3□□□□□ -1.08
VAMP3-202ENST00000470357 ANKRD36CQ5JPF3 1778 aa8.3□□□□□ -1.08
VAMP3-202ENST00000470357 ZBTB7BO15156 539 aaPredicted RBP8.29□□□□□ -1.08
VAMP3-202ENST00000470357 GDF9O60383 454 aa8.29□□□□□ -1.08
VAMP3-202ENST00000470357 F12P00748 615 aaPredicted RBP8.29□□□□□ -1.08
VAMP3-202ENST00000470357 A1BGP04217 495 aa8.29□□□□□ -1.08
VAMP3-202ENST00000470357 FSTL1Q12841 308 aa8.29□□□□□ -1.08
VAMP3-202ENST00000470357 PROSER3Q2NL68 480 aa8.29□□□□□ -1.08
VAMP3-202ENST00000470357 KIF6Q6ZMV9 814 aa8.29□□□□□ -1.08
VAMP3-202ENST00000470357 CENPQQ7L2Z9 268 aaPredicted RBP8.29□□□□□ -1.08
VAMP3-202ENST00000470357 COPS6Q7L5N1 327 aa8.29□□□□□ -1.08
VAMP3-202ENST00000470357 XAGE3Q8WTP9 111 aa8.29□□□□□ -1.08
VAMP3-202ENST00000470357 LRRN4Q8WUT4 740 aa8.29□□□□□ -1.08
VAMP3-202ENST00000470357 BAP1Q92560 729 aa8.29□□□□□ -1.08
VAMP3-202ENST00000470357 RWDD1Q9H446 243 aaPredicted RBP8.29□□□□□ -1.08
VAMP3-202ENST00000470357 CCDC87Q9NVE4 849 aa8.29□□□□□ -1.08
VAMP3-202ENST00000470357 TNNQ9UQP3 1299 aa8.29□□□□□ -1.08
VAMP3-202ENST00000470357 BCS1LQ9Y276 419 aa8.29□□□□□ -1.08
VAMP3-202ENST00000470357 MAP3K2Q9Y2U5 619 aa8.29□□□□□ -1.08
VAMP3-202ENST00000470357 MYH14Q7Z406 1995 aaKnown RBP8.29□□□□□ -1.08
VAMP3-202ENST00000470357 NUP98P52948 1817 aa8.29□□□□□ -1.08
VAMP3-202ENST00000470357 C10orf71Q711Q0 1435 aa8.29□□□□□ -1.08
VAMP3-202ENST00000470357 CNTNAP4Q9C0A0 1308 aa8.29□□□□□ -1.08
VAMP3-202ENST00000470357 A0A087WZG4 1122 aa8.28□□□□□ -1.08
VAMP3-202ENST00000470357 F6X3S4 739 aa8.28□□□□□ -1.08
VAMP3-202ENST00000470357 ANXA1P04083 346 aa8.28□□□□□ -1.08
VAMP3-202ENST00000470357 DPEP1P16444 411 aa8.28□□□□□ -1.08
VAMP3-202ENST00000470357 SKOR1P84550 965 aa8.28□□□□□ -1.08
VAMP3-202ENST00000470357 AIMP1Q12904 312 aaKnown RBP8.28□□□□□ -1.08
VAMP3-202ENST00000470357 LINC01559Q495D7 138 aa8.28□□□□□ -1.08
VAMP3-202ENST00000470357 HSP90AB3PQ58FF7 597 aa8.28□□□□□ -1.08
VAMP3-202ENST00000470357 RC3H1Q5TC82 1133 aaKnown RBP8.28□□□□□ -1.08
VAMP3-202ENST00000470357 C9orf131Q5VYM1 1079 aa8.28□□□□□ -1.08
VAMP3-202ENST00000470357 NBPF10Q6P3W6 841 aaKnown RBP8.28□□□□□ -1.08
VAMP3-202ENST00000470357 ARHGAP27Q6ZUM4 889 aa8.28□□□□□ -1.08
VAMP3-202ENST00000470357 LRP10Q7Z4F1 713 aa8.28□□□□□ -1.08
VAMP3-202ENST00000470357 RPAP2Q8IXW5 612 aaPredicted RBP8.28□□□□□ -1.08
VAMP3-202ENST00000470357 TNS4Q8IZW8 715 aa8.28□□□□□ -1.08
VAMP3-202ENST00000470357 NBPF15Q8N660 670 aa8.28□□□□□ -1.08
VAMP3-202ENST00000470357 METTL22Q9BUU2 404 aaPredicted RBP8.28□□□□□ -1.08
VAMP3-202ENST00000470357 ERVV-1B6SEH8 477 aa8.27□□□□□ -1.09
VAMP3-202ENST00000470357 HMMRO75330 724 aa8.27□□□□□ -1.09
VAMP3-202ENST00000470357 GNAI2P04899 355 aa8.27□□□□□ -1.09
VAMP3-202ENST00000470357 UBTFL1P0CB47 393 aaPredicted RBP8.27□□□□□ -1.09
VAMP3-202ENST00000470357 CRKLP46109 303 aaKnown RBP8.27□□□□□ -1.09
VAMP3-202ENST00000470357 HDAC1Q13547 482 aaPredicted RBP8.27□□□□□ -1.09
VAMP3-202ENST00000470357 BEND3Q5T5X7 828 aa8.27□□□□□ -1.09
VAMP3-202ENST00000470357 B4GALNT3Q6L9W6 998 aa8.27□□□□□ -1.09
VAMP3-202ENST00000470357 SLC4A9Q96Q91 983 aa8.27□□□□□ -1.09
VAMP3-202ENST00000470357 BRCA1P38398 1863 aaKnown RBP8.26□□□□□ -1.09
VAMP3-202ENST00000470357 BCORQ6W2J9 1755 aa8.26□□□□□ -1.09
VAMP3-202ENST00000470357 EIF5P55010 431 aaKnown RBP8.26□□□□□ -1.09
VAMP3-202ENST00000470357 SH3BP2P78314 561 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms