RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 KCNB2Q92953 911 aa11.11□□□□□ -0.63
TOP3A-203ENST00000469739 HMG20BQ9P0W2 317 aa11.11□□□□□ -0.63
TOP3A-203ENST00000469739 DMTNQ08495 405 aa11.11□□□□□ -0.63
TOP3A-203ENST00000469739 SUSD4Q5VX71 490 aa11.11□□□□□ -0.63
TOP3A-203ENST00000469739 GTF3C6Q969F1 213 aa11.11□□□□□ -0.63
TOP3A-203ENST00000469739 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.1□□□□□ -0.63
TOP3A-203ENST00000469739 GPAA1O43292 621 aa11.1□□□□□ -0.63
TOP3A-203ENST00000469739 CTSWP56202 376 aa11.1□□□□□ -0.63
TOP3A-203ENST00000469739 FAM98CQ17RN3 349 aaKnown RBP11.1□□□□□ -0.63
TOP3A-203ENST00000469739 DHX32Q7L7V1 743 aaKnown RBP11.1□□□□□ -0.63
TOP3A-203ENST00000469739 C17orf53Q8N3J3 647 aaPredicted RBP11.1□□□□□ -0.63
TOP3A-203ENST00000469739 CCDC82Q8N4S0 544 aa11.1□□□□□ -0.63
TOP3A-203ENST00000469739 SPC24Q8NBT2 197 aa11.1□□□□□ -0.63
TOP3A-203ENST00000469739 IL17RAQ96F46 866 aa11.1□□□□□ -0.63
TOP3A-203ENST00000469739 DACT1Q9NYF0 836 aa11.1□□□□□ -0.63
TOP3A-203ENST00000469739 JAG2Q9Y219 1238 aa11.1□□□□□ -0.63
TOP3A-203ENST00000469739 PTPDC1A2A3K4 754 aa11.1□□□□□ -0.63
TOP3A-203ENST00000469739 POLR3DP05423 398 aaPredicted RBP11.1□□□□□ -0.63
TOP3A-203ENST00000469739 KRT32Q14532 448 aa11.1□□□□□ -0.63
TOP3A-203ENST00000469739 RRP12Q5JTH9 1297 aaKnown RBP11.1□□□□□ -0.63
TOP3A-203ENST00000469739 CCDC183Q5T5S1 534 aa11.1□□□□□ -0.63
TOP3A-203ENST00000469739 MYL10Q9BUA6 226 aa11.1□□□□□ -0.63
TOP3A-203ENST00000469739 PIH1D3Q9NQM4 214 aaKnown RBP11.1□□□□□ -0.63
TOP3A-203ENST00000469739 WWC3Q9ULE0 1092 aa11.1□□□□□ -0.63
TOP3A-203ENST00000469739 NIP7Q9Y221 180 aaKnown RBP eCLIP11.1□□□□□ -0.63
TOP3A-203ENST00000469739 DYNC1I1O14576 645 aa11.1□□□□□ -0.63
TOP3A-203ENST00000469739 USPL1Q5W0Q7 1092 aa11.1□□□□□ -0.63
TOP3A-203ENST00000469739 MPHOSPH8Q99549 860 aa11.1□□□□□ -0.63
TOP3A-203ENST00000469739 DISP2A7MBM2 1401 aa11.1□□□□□ -0.63
TOP3A-203ENST00000469739 SLC4A8Q2Y0W8 1093 aa11.09□□□□□ -0.63
TOP3A-203ENST00000469739 MIGA1Q8NAN2 632 aa11.09□□□□□ -0.63
TOP3A-203ENST00000469739 AKAP2Q9Y2D5 859 aa11.09□□□□□ -0.63
TOP3A-203ENST00000469739 CRKLP46109 303 aaKnown RBP11.09□□□□□ -0.63
TOP3A-203ENST00000469739 ITPK1Q13572 414 aa11.09□□□□□ -0.63
TOP3A-203ENST00000469739 MARCH10Q8NA82 808 aaPredicted RBP11.09□□□□□ -0.63
TOP3A-203ENST00000469739 TEX13AQ9BXU3 409 aaPredicted RBP11.09□□□□□ -0.63
TOP3A-203ENST00000469739 ABCF2Q9UG63 623 aa11.09□□□□□ -0.63
TOP3A-203ENST00000469739 RIPOR2Q9Y4F9 1068 aa11.09□□□□□ -0.63
TOP3A-203ENST00000469739 UTRNP46939 3433 aa11.09□□□□□ -0.63
TOP3A-203ENST00000469739 LTBP4Q8N2S1 1624 aa11.08□□□□□ -0.63
TOP3A-203ENST00000469739 CTDNEP1O95476 244 aa11.08□□□□□ -0.64
TOP3A-203ENST00000469739 GTF2E1P29083 439 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-203ENST00000469739 BCAMP50895 628 aa11.08□□□□□ -0.64
TOP3A-203ENST00000469739 CCDC102BQ68D86 513 aa11.08□□□□□ -0.64
TOP3A-203ENST00000469739 C8orf37Q96NL8 207 aa11.08□□□□□ -0.64
TOP3A-203ENST00000469739 ZKSCAN3Q9BRR0 538 aa11.08□□□□□ -0.64
TOP3A-203ENST00000469739 HELLSQ9NRZ9 838 aa11.08□□□□□ -0.64
TOP3A-203ENST00000469739 KLF18A0A0U1RQI7 1052 aa11.08□□□□□ -0.64
TOP3A-203ENST00000469739 FOXP2O15409 715 aa11.08□□□□□ -0.64
TOP3A-203ENST00000469739 PDCP20941 246 aa11.08□□□□□ -0.64
TOP3A-203ENST00000469739 AIFM3Q96NN9 605 aa11.08□□□□□ -0.64
TOP3A-203ENST00000469739 TTC12Q9H892 705 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-203ENST00000469739 SENP2Q9HC62 589 aa11.08□□□□□ -0.64
TOP3A-203ENST00000469739 UBE2Q2LH0YL09 131 aa11.08□□□□□ -0.64
TOP3A-203ENST00000469739 PRC1O43663 620 aa11.08□□□□□ -0.64
TOP3A-203ENST00000469739 NR1I2O75469 434 aa11.08□□□□□ -0.64
TOP3A-203ENST00000469739 RALYLQ86SE5 291 aaKnown RBP11.08□□□□□ -0.64
TOP3A-203ENST00000469739 ZNF532Q9HCE3 1301 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 PHLPP1O60346 1717 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 NRAPQ86VF7 1730 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 LRP6O75581 1613 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 LOC102724428A0A0B4J2F2 783 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 GOLGA8BA8MQT2 603 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 SMIM22K7EJ46 135 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 ZNF213O14771 459 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 PHF14O94880 888 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 SIK1P57059 783 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 IMMTQ16891 758 aaKnown RBP11.07□□□□□ -0.64
TOP3A-203ENST00000469739 NSUN7Q8NE18 718 aaKnown RBP11.07□□□□□ -0.64
TOP3A-203ENST00000469739 LEO1Q8WVC0 666 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-203ENST00000469739 SH3TC1Q8TE82 1336 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 B4E1Z4 1266 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 PRKAB2O43741 272 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 ZNF500O60304 480 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-203ENST00000469739 CIAO1O76071 339 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 PDE8BO95263 885 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 ADCY5O95622 1261 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 CSF1RP07333 972 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 ZSCAN20P17040 1043 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-203ENST00000469739 PDIA3P30101 505 aaKnown RBP11.07□□□□□ -0.64
TOP3A-203ENST00000469739 MICU3Q86XE3 530 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 MAGEB6Q8N7X4 407 aa11.07□□□□□ -0.64
TOP3A-203ENST00000469739 CCDC94Q9BW85 323 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-203ENST00000469739 CPLX1O14810 134 aa11.06□□□□□ -0.64
TOP3A-203ENST00000469739 CTDSPL2Q05D32 466 aa11.06□□□□□ -0.64
TOP3A-203ENST00000469739 HS1BP3Q53T59 392 aa11.06□□□□□ -0.64
TOP3A-203ENST00000469739 SLC51AQ86UW1 340 aa11.06□□□□□ -0.64
TOP3A-203ENST00000469739 LUZP1Q86V48 1076 aa11.06□□□□□ -0.64
TOP3A-203ENST00000469739 CMTR1Q8N1G2 835 aaKnown RBP11.06□□□□□ -0.64
TOP3A-203ENST00000469739 PGBD1Q96JS3 809 aa11.06□□□□□ -0.64
TOP3A-203ENST00000469739 ARMT1Q9H993 441 aa11.06□□□□□ -0.64
TOP3A-203ENST00000469739 DOT1LQ8TEK3 1739 aa11.06□□□□□ -0.64
TOP3A-203ENST00000469739 SRCAPQ6ZRS2 3230 aa11.06□□□□□ -0.64
TOP3A-203ENST00000469739 PDE8AO60658 829 aa11.06□□□□□ -0.64
TOP3A-203ENST00000469739 DSCC1Q9BVC3 393 aa11.06□□□□□ -0.64
TOP3A-203ENST00000469739 NUP62CLQ9H1M0 184 aa11.06□□□□□ -0.64
TOP3A-203ENST00000469739 TNMDQ9H2S6 317 aa11.06□□□□□ -0.64
TOP3A-203ENST00000469739 NOL7Q9UMY1 257 aaKnown RBP11.06□□□□□ -0.64
TOP3A-203ENST00000469739 ADD1P35611 737 aaKnown RBP11.06□□□□□ -0.64
TOP3A-203ENST00000469739 APPBP2Q92624 585 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms