RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 RFX5P48382 616 aaPredicted RBP23.85■■□□□ 1.41
USP11-205ENST00000467378 ANGEL2Q5VTE6 544 aaKnown RBP23.85■■□□□ 1.41
USP11-205ENST00000467378 FKBP1BP68106 108 aa23.84■■□□□ 1.41
USP11-205ENST00000467378 GPSM2P81274 684 aa23.84■■□□□ 1.41
USP11-205ENST00000467378 MTX1Q13505 466 aa23.84■■□□□ 1.41
USP11-205ENST00000467378 FBXO46Q6PJ61 603 aaPredicted RBP23.84■■□□□ 1.41
USP11-205ENST00000467378 MPHOSPH8Q99549 860 aa23.84■■□□□ 1.41
USP11-205ENST00000467378 SUPT16HQ9Y5B9 1047 aaKnown RBP23.84■■□□□ 1.41
USP11-205ENST00000467378 PSME4Q14997 1843 aa23.83■■□□□ 1.41
USP11-205ENST00000467378 G3V3G9 751 aa23.83■■□□□ 1.41
USP11-205ENST00000467378 HABP4Q5JVS0 413 aaKnown RBP23.83■■□□□ 1.41
USP11-205ENST00000467378 DCAF8Q5TAQ9 597 aa23.83■■□□□ 1.41
USP11-205ENST00000467378 MINPP1Q9UNW1 487 aa23.83■■□□□ 1.41
USP11-205ENST00000467378 VIL1P09327 827 aaKnown RBP23.82■■□□□ 1.4
USP11-205ENST00000467378 SCARF1Q14162 830 aa23.82■■□□□ 1.4
USP11-205ENST00000467378 TAF7LQ5H9L4 462 aa23.82■■□□□ 1.4
USP11-205ENST00000467378 C1orf115Q9H7X2 142 aa23.82■■□□□ 1.4
USP11-205ENST00000467378 ZBTB40Q9NUA8 1239 aa23.82■■□□□ 1.4
USP11-205ENST00000467378 GPR25O00155 361 aa23.81■■□□□ 1.4
USP11-205ENST00000467378 LDHAL6AQ6ZMR3 332 aa23.81■■□□□ 1.4
USP11-205ENST00000467378 MOB2Q70IA6 237 aa23.81■■□□□ 1.4
USP11-205ENST00000467378 KLHDC4Q8TBB5 520 aa23.81■■□□□ 1.4
USP11-205ENST00000467378 ZC3H12CQ9C0D7 883 aaKnown RBP23.81■■□□□ 1.4
USP11-205ENST00000467378 PODXL2Q9NZ53 605 aa23.81■■□□□ 1.4
USP11-205ENST00000467378 UBE2Q2LH0YL09 131 aa23.8■■□□□ 1.4
USP11-205ENST00000467378 PTPN12Q05209 780 aaKnown RBP23.8■■□□□ 1.4
USP11-205ENST00000467378 TBC1D16Q8TBP0 767 aa23.8■■□□□ 1.4
USP11-205ENST00000467378 PUS3Q9BZE2 481 aaKnown RBP23.8■■□□□ 1.4
USP11-205ENST00000467378 CHMP4BQ9H444 224 aaKnown RBP23.8■■□□□ 1.4
USP11-205ENST00000467378 SRGAP3O43295 1099 aa23.79■■□□□ 1.4
USP11-205ENST00000467378 ATP8B2P98198 1209 aa23.79■■□□□ 1.4
USP11-205ENST00000467378 PNMA6EA0A0J9YXQ4 647 aa23.78■■□□□ 1.4
USP11-205ENST00000467378 CHRNDQ07001 517 aa23.78■■□□□ 1.4
USP11-205ENST00000467378 TTLL12Q14166 644 aaPredicted RBP23.78■■□□□ 1.4
USP11-205ENST00000467378 CNNM1Q9NRU3 951 aa23.78■■□□□ 1.4
USP11-205ENST00000467378 RIPOR2Q9Y4F9 1068 aa23.78■■□□□ 1.4
USP11-205ENST00000467378 FKTNO75072 461 aa23.77■■□□□ 1.4
USP11-205ENST00000467378 ZNF280AP59817 542 aaPredicted RBP23.77■■□□□ 1.4
USP11-205ENST00000467378 LRRC24Q50LG9 513 aa23.77■■□□□ 1.4
USP11-205ENST00000467378 ANKIB1Q9P2G1 1089 aa23.77■■□□□ 1.4
USP11-205ENST00000467378 SCAF8Q9UPN6 1271 aaKnown RBP23.77■■□□□ 1.4
USP11-205ENST00000467378 XDHP47989 1333 aa23.77■■□□□ 1.4
USP11-205ENST00000467378 TM4SF4P48230 202 aa23.76■■□□□ 1.39
USP11-205ENST00000467378 MKRN3Q13064 507 aaKnown RBP23.76■■□□□ 1.39
USP11-205ENST00000467378 NOM1Q5C9Z4 860 aaKnown RBP23.76■■□□□ 1.39
USP11-205ENST00000467378 RSBN1LQ6PCB5 846 aaPredicted RBP23.76■■□□□ 1.39
USP11-205ENST00000467378 ANKRD2Q9GZV1 360 aa23.76■■□□□ 1.39
USP11-205ENST00000467378 COPRSQ9NQ92 184 aa23.76■■□□□ 1.39
USP11-205ENST00000467378 WTIPA6NIX2 430 aaPredicted RBP23.75■■□□□ 1.39
USP11-205ENST00000467378 ATP2B4P23634 1241 aa23.75■■□□□ 1.39
USP11-205ENST00000467378 POLA2Q14181 598 aa23.75■■□□□ 1.39
USP11-205ENST00000467378 CEP85Q6P2H3 762 aa23.75■■□□□ 1.39
USP11-205ENST00000467378 AGBL3Q8NEM8 1001 aa23.75■■□□□ 1.39
USP11-205ENST00000467378 SSH3Q8TE77 659 aa23.75■■□□□ 1.39
USP11-205ENST00000467378 CRBNQ96SW2 442 aa23.75■■□□□ 1.39
USP11-205ENST00000467378 GGA1Q9UJY5 639 aa23.75■■□□□ 1.39
USP11-205ENST00000467378 PA2G4Q9UQ80 394 aaKnown RBP23.75■■□□□ 1.39
USP11-205ENST00000467378 PITPNM2Q9BZ72 1349 aa23.75■■□□□ 1.39
USP11-205ENST00000467378 EYA2O00167 538 aa23.74■■□□□ 1.39
USP11-205ENST00000467378 UFL1O94874 794 aa23.74■■□□□ 1.39
USP11-205ENST00000467378 PRAMEF18Q5VWM3 479 aa23.74■■□□□ 1.39
USP11-205ENST00000467378 HELBQ8NG08 1087 aaPredicted RBP23.74■■□□□ 1.39
USP11-205ENST00000467378 MYOZ2Q9NPC6 264 aa23.74■■□□□ 1.39
USP11-205ENST00000467378 FBXO3Q9UK99 471 aa23.74■■□□□ 1.39
USP11-205ENST00000467378 TAF5LO75529 589 aa23.73■■□□□ 1.39
USP11-205ENST00000467378 ATG9AQ7Z3C6 839 aa23.73■■□□□ 1.39
USP11-205ENST00000467378 RPAP2Q8IXW5 612 aaPredicted RBP23.73■■□□□ 1.39
USP11-205ENST00000467378 LEMD3Q9Y2U8 911 aa23.73■■□□□ 1.39
USP11-205ENST00000467378 CIAO1O76071 339 aa23.72■■□□□ 1.39
USP11-205ENST00000467378 USP17L8P0C7I0 530 aa23.72■■□□□ 1.39
USP11-205ENST00000467378 SREBF2Q12772 1141 aa23.72■■□□□ 1.39
USP11-205ENST00000467378 MROH5Q6ZUA9 1318 aa23.72■■□□□ 1.39
USP11-205ENST00000467378 ZNF609O15014 1411 aa23.72■■□□□ 1.39
USP11-205ENST00000467378 RBBP6Q7Z6E9 1792 aaKnown RBP23.72■■□□□ 1.39
USP11-205ENST00000467378 SIL1Q9H173 461 aa23.71■■□□□ 1.39
USP11-205ENST00000467378 ZNF804BA4D1E1 1349 aa23.7■■□□□ 1.38
USP11-205ENST00000467378 NF2P35240 595 aa23.7■■□□□ 1.38
USP11-205ENST00000467378 SIRT2Q8IXJ6 389 aa23.7■■□□□ 1.38
USP11-205ENST00000467378 VGLL2Q8N8G2 317 aa23.7■■□□□ 1.38
USP11-205ENST00000467378 R3HDMLQ9H3Y0 253 aa23.7■■□□□ 1.38
USP11-205ENST00000467378 POTEFA5A3E0 1075 aa23.69■■□□□ 1.38
USP11-205ENST00000467378 SNAP23O00161 211 aa23.69■■□□□ 1.38
USP11-205ENST00000467378 METTL24Q5JXM2 366 aa23.69■■□□□ 1.38
USP11-205ENST00000467378 PDE8BO95263 885 aa23.68■■□□□ 1.38
USP11-205ENST00000467378 IL15P40933 162 aaPredicted RBP23.68■■□□□ 1.38
USP11-205ENST00000467378 GMLQ99445 158 aa23.68■■□□□ 1.38
USP11-205ENST00000467378 TRIM17Q9Y577 477 aa23.68■■□□□ 1.38
USP11-205ENST00000467378 MED23Q9ULK4 1368 aa23.67■■□□□ 1.38
USP11-205ENST00000467378 KIAA0100Q14667 2235 aaKnown RBP23.67■■□□□ 1.38
USP11-205ENST00000467378 IRS2Q9Y4H2 1338 aa23.67■■□□□ 1.38
USP11-205ENST00000467378 NBPF9Q3BBW0 867 aa23.67■■□□□ 1.38
USP11-205ENST00000467378 CFHR5Q9BXR6 569 aa23.67■■□□□ 1.38
USP11-205ENST00000467378 PRKG1Q13976 671 aa23.66■■□□□ 1.38
USP11-205ENST00000467378 UBE4AQ14139 1066 aa23.66■■□□□ 1.38
USP11-205ENST00000467378 TXNRD3Q86VQ6 643 aa23.66■■□□□ 1.38
USP11-205ENST00000467378 NOP58Q9Y2X3 529 aaKnown RBP23.66■■□□□ 1.38
USP11-205ENST00000467378 USP17L3A6NCW0 530 aa23.65■■□□□ 1.38
USP11-205ENST00000467378 USP17L4A6NCW7 530 aa23.65■■□□□ 1.38
USP11-205ENST00000467378 KCNJ4P48050 445 aa23.65■■□□□ 1.38
USP11-205ENST00000467378 FXR1P51114 621 aaKnown RBP eCLIP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms