RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 SPEF2Q9C093 1822 aa15.66■□□□□ 0.1
UBR4-211ENST00000467272 SPDYE2BA6NHP3 402 aa15.66■□□□□ 0.1
UBR4-211ENST00000467272 SNAP23O00161 211 aa15.66■□□□□ 0.1
UBR4-211ENST00000467272 SPDYE6P0CI01 402 aa15.66■□□□□ 0.1
UBR4-211ENST00000467272 NEXNQ0ZGT2 675 aa15.66■□□□□ 0.1
UBR4-211ENST00000467272 PRKG1Q13976 671 aa15.66■□□□□ 0.1
UBR4-211ENST00000467272 CCDC27Q2M243 656 aa15.66■□□□□ 0.1
UBR4-211ENST00000467272 PTPN18Q99952 460 aa15.66■□□□□ 0.1
UBR4-211ENST00000467272 POTEFA5A3E0 1075 aa15.65■□□□□ 0.1
UBR4-211ENST00000467272 INTS3Q68E01 1043 aaKnown RBP15.65■□□□□ 0.1
UBR4-211ENST00000467272 TSR2Q969E8 191 aaKnown RBP15.65■□□□□ 0.1
UBR4-211ENST00000467272 ARMC5Q96C12 935 aa15.65■□□□□ 0.1
UBR4-211ENST00000467272 SLC10A4Q96EP9 437 aa15.65■□□□□ 0.1
UBR4-211ENST00000467272 PRMT6Q96LA8 375 aaPredicted RBP15.65■□□□□ 0.1
UBR4-211ENST00000467272 SZT2Q5T011 3432 aa15.65■□□□□ 0.1
UBR4-211ENST00000467272 USP2O75604 605 aaPredicted RBP15.64■□□□□ 0.09
UBR4-211ENST00000467272 SLC4A2P04920 1241 aa15.64■□□□□ 0.09
UBR4-211ENST00000467272 FOXO4P98177 505 aa15.64■□□□□ 0.09
UBR4-211ENST00000467272 DLGAP5Q15398 846 aa15.64■□□□□ 0.09
UBR4-211ENST00000467272 FBXW7Q969H0 707 aa15.64■□□□□ 0.09
UBR4-211ENST00000467272 PTPN22Q9Y2R2 807 aa15.64■□□□□ 0.09
UBR4-211ENST00000467272 RBBP6Q7Z6E9 1792 aaKnown RBP15.64■□□□□ 0.09
UBR4-211ENST00000467272 TWISTNBQ3B726 338 aaPredicted RBP15.63■□□□□ 0.09
UBR4-211ENST00000467272 NCBP3Q53F19 620 aaKnown RBP15.63■□□□□ 0.09
UBR4-211ENST00000467272 HABP4Q5JVS0 413 aaKnown RBP15.63■□□□□ 0.09
UBR4-211ENST00000467272 NBPF12Q5TAG4 269 aaPredicted RBP15.63■□□□□ 0.09
UBR4-211ENST00000467272 LINS1Q8NG48 757 aa15.63■□□□□ 0.09
UBR4-211ENST00000467272 GCC1Q96CN9 775 aa15.63■□□□□ 0.09
UBR4-211ENST00000467272 MS4A4AQ96JQ5 239 aa15.63■□□□□ 0.09
UBR4-211ENST00000467272 TRIM17Q9Y577 477 aa15.63■□□□□ 0.09
UBR4-211ENST00000467272 PPP1R12BO60237 982 aaPredicted RBP15.62■□□□□ 0.09
UBR4-211ENST00000467272 FLIIQ13045 1269 aa15.62■□□□□ 0.09
UBR4-211ENST00000467272 CRHR2Q13324 411 aa15.62■□□□□ 0.09
UBR4-211ENST00000467272 CFAP100Q494V2 611 aa15.62■□□□□ 0.09
UBR4-211ENST00000467272 WWC1Q8IX03 1113 aa15.62■□□□□ 0.09
UBR4-211ENST00000467272 MPHOSPH8Q99549 860 aa15.62■□□□□ 0.09
UBR4-211ENST00000467272 STK31Q9BXU1 1019 aa15.62■□□□□ 0.09
UBR4-211ENST00000467272 IL16Q14005 1332 aa15.62■□□□□ 0.09
UBR4-211ENST00000467272 KIAA0100Q14667 2235 aaKnown RBP15.62■□□□□ 0.09
UBR4-211ENST00000467272 TAF5LO75529 589 aa15.61■□□□□ 0.09
UBR4-211ENST00000467272 SUPT20HL1Q3ZLR7 823 aa15.61■□□□□ 0.09
UBR4-211ENST00000467272 DNAAF4Q8WXU2 420 aa15.61■□□□□ 0.09
UBR4-211ENST00000467272 TEPSINQ96N21 525 aa15.61■□□□□ 0.09
UBR4-211ENST00000467272 A0A1B0GUL6 1792 aa15.61■□□□□ 0.09
UBR4-211ENST00000467272 FAM205AQ6ZU69 1335 aa15.61■□□□□ 0.09
UBR4-211ENST00000467272 CEP290O15078 2479 aa15.6■□□□□ 0.09
UBR4-211ENST00000467272 ECM29Q5VYK3 1845 aa15.6■□□□□ 0.09
UBR4-211ENST00000467272 ERO1AQ96HE7 468 aa15.6■□□□□ 0.09
UBR4-211ENST00000467272 MYH16Q9H6N6 1097 aa15.6■□□□□ 0.09
UBR4-211ENST00000467272 CLRN2A0PK11 232 aa15.59■□□□□ 0.09
UBR4-211ENST00000467272 ANKRD18BA2A2Z9 1011 aa15.59■□□□□ 0.09
UBR4-211ENST00000467272 RASA3Q14644 834 aa15.59■□□□□ 0.09
UBR4-211ENST00000467272 SPDYE2Q495Y8 402 aa15.59■□□□□ 0.09
UBR4-211ENST00000467272 EPHA10Q5JZY3 1008 aa15.59■□□□□ 0.09
UBR4-211ENST00000467272 BEND3Q5T5X7 828 aa15.59■□□□□ 0.09
UBR4-211ENST00000467272 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.59■□□□□ 0.09
UBR4-211ENST00000467272 CDAN1Q8IWY9 1227 aa15.59■□□□□ 0.09
UBR4-211ENST00000467272 ANKRD13AQ8IZ07 590 aa15.59■□□□□ 0.09
UBR4-211ENST00000467272 HELBQ8NG08 1087 aaPredicted RBP15.59■□□□□ 0.09
UBR4-211ENST00000467272 CD99L2Q8TCZ2 262 aa15.59■□□□□ 0.09
UBR4-211ENST00000467272 VAMP4O75379 141 aa15.58■□□□□ 0.08
UBR4-211ENST00000467272 KCNJ4P48050 445 aa15.58■□□□□ 0.08
UBR4-211ENST00000467272 IREB2P48200 963 aaKnown RBP15.58■□□□□ 0.08
UBR4-211ENST00000467272 ZNF804AQ7Z570 1209 aa15.58■□□□□ 0.08
UBR4-211ENST00000467272 TDRD7Q8NHU6 1098 aaKnown RBP15.58■□□□□ 0.08
UBR4-211ENST00000467272 ZNF333Q96JL9 665 aa15.58■□□□□ 0.08
UBR4-211ENST00000467272 EN2P19622 333 aaPredicted RBP15.57■□□□□ 0.08
UBR4-211ENST00000467272 SP3Q02447 781 aa15.57■□□□□ 0.08
UBR4-211ENST00000467272 IFIT5Q13325 482 aaKnown RBP15.57■□□□□ 0.08
UBR4-211ENST00000467272 BRI3BPQ8WY22 251 aa15.57■□□□□ 0.08
UBR4-211ENST00000467272 EFCC1Q9HA90 598 aa15.57■□□□□ 0.08
UBR4-211ENST00000467272 SERPINA10Q9UK55 444 aa15.57■□□□□ 0.08
UBR4-211ENST00000467272 OTOFQ9HC10 1997 aa15.56■□□□□ 0.08
UBR4-211ENST00000467272 F8W031 263 aaPredicted RBP15.56■□□□□ 0.08
UBR4-211ENST00000467272 MYO1BO43795 1136 aa15.56■□□□□ 0.08
UBR4-211ENST00000467272 FXR1P51114 621 aaKnown RBP eCLIP15.56■□□□□ 0.081e-6■■■□□ 16.1
UBR4-211ENST00000467272 FKBP5Q13451 457 aaPredicted RBP15.56■□□□□ 0.08
UBR4-211ENST00000467272 CCDC184Q52MB2 194 aa15.56■□□□□ 0.08
UBR4-211ENST00000467272 OTUD7BQ6GQQ9 843 aa15.56■□□□□ 0.08
UBR4-211ENST00000467272 ZNF70Q9UC06 446 aaPredicted RBP15.56■□□□□ 0.08
UBR4-211ENST00000467272 FANCIQ9NVI1 1328 aa15.55■□□□□ 0.08
UBR4-211ENST00000467272 LMBR1LQ6UX01 489 aa15.55■□□□□ 0.08
UBR4-211ENST00000467272 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.55■□□□□ 0.08
UBR4-211ENST00000467272 CNKSR2Q8WXI2 1034 aa15.55■□□□□ 0.08
UBR4-211ENST00000467272 OPTNQ96CV9 577 aa15.55■□□□□ 0.08
UBR4-211ENST00000467272 FAM84BQ96KN1 310 aaPredicted RBP15.55■□□□□ 0.08
UBR4-211ENST00000467272 VEZTQ9HBM0 779 aa15.55■□□□□ 0.08
UBR4-211ENST00000467272 KAZALD1Q96I82 304 aa15.54■□□□□ 0.08
UBR4-211ENST00000467272 ZNF594Q96JF6 807 aaPredicted RBP15.54■□□□□ 0.08
UBR4-211ENST00000467272 ELP3Q9H9T3 547 aa15.54■□□□□ 0.08
UBR4-211ENST00000467272 JAG2Q9Y219 1238 aa15.54■□□□□ 0.08
UBR4-211ENST00000467272 TNFAIP1Q13829 316 aa15.53■□□□□ 0.08
UBR4-211ENST00000467272 VGLL4Q14135 290 aa15.53■□□□□ 0.08
UBR4-211ENST00000467272 UBE4AQ14139 1066 aa15.53■□□□□ 0.08
UBR4-211ENST00000467272 MFSD14BQ5SR56 506 aa15.53■□□□□ 0.08
UBR4-211ENST00000467272 LDHAL6AQ6ZMR3 332 aa15.53■□□□□ 0.08
UBR4-211ENST00000467272 DZIP1LQ8IYY4 767 aaKnown RBP15.53■□□□□ 0.08
UBR4-211ENST00000467272 FAM43AQ8N2R8 423 aa15.53■□□□□ 0.08
UBR4-211ENST00000467272 F6X3S4 739 aa15.52■□□□□ 0.08
UBR4-211ENST00000467272 GRIK5Q16478 980 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms