RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 TDRD7Q8NHU6 1098 aaKnown RBP13.07□□□□□ -0.32
NUP188-204ENST00000467044 EDC3Q96F86 508 aaKnown RBP13.07□□□□□ -0.32
NUP188-204ENST00000467044 VPS33BQ9H267 617 aa13.07□□□□□ -0.32
NUP188-204ENST00000467044 JAG2Q9Y219 1238 aa13.07□□□□□ -0.32
NUP188-204ENST00000467044 CHD4Q14839 1912 aa13.07□□□□□ -0.32
NUP188-204ENST00000467044 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
NUP188-204ENST00000467044 AKAP11Q9UKA4 1901 aa13.06□□□□□ -0.32
NUP188-204ENST00000467044 IL1R1P14778 569 aa13.06□□□□□ -0.32
NUP188-204ENST00000467044 PODNQ7Z5L7 613 aa13.06□□□□□ -0.32
NUP188-204ENST00000467044 NIM1KQ8IY84 436 aa13.06□□□□□ -0.32
NUP188-204ENST00000467044 CNTROBQ8N137 903 aa13.06□□□□□ -0.32
NUP188-204ENST00000467044 PAG1Q9NWQ8 432 aa13.06□□□□□ -0.32
NUP188-204ENST00000467044 LTBP3Q9NS15 1303 aa13.06□□□□□ -0.32
NUP188-204ENST00000467044 CYP2E1P05181 493 aaPredicted RBP13.05□□□□□ -0.32
NUP188-204ENST00000467044 SDSP20132 328 aa13.05□□□□□ -0.32
NUP188-204ENST00000467044 GTF2IP78347 998 aa13.05□□□□□ -0.32
NUP188-204ENST00000467044 BMP2KLQ5H9B9 411 aa13.05□□□□□ -0.32
NUP188-204ENST00000467044 TBC1D9Q6ZT07 1266 aa13.05□□□□□ -0.32
NUP188-204ENST00000467044 JDP2Q8WYK2 163 aa13.05□□□□□ -0.32
NUP188-204ENST00000467044 EVI5LQ96CN4 794 aa13.05□□□□□ -0.32
NUP188-204ENST00000467044 ANTXR1Q9H6X2 564 aa13.05□□□□□ -0.32
NUP188-204ENST00000467044 ABCF2Q9UG63 623 aa13.05□□□□□ -0.32
NUP188-204ENST00000467044 AK9Q5TCS8 1911 aa13.05□□□□□ -0.32
NUP188-204ENST00000467044 GRIN3BO60391 1043 aa13.04□□□□□ -0.32
NUP188-204ENST00000467044 TTF1Q15361 905 aaPredicted RBP13.04□□□□□ -0.32
NUP188-204ENST00000467044 TTLL5Q6EMB2 1281 aa13.04□□□□□ -0.32
NUP188-204ENST00000467044 WDR66Q8TBY9 1149 aa13.04□□□□□ -0.32
NUP188-204ENST00000467044 FSD1Q9BTV5 496 aa13.04□□□□□ -0.32
NUP188-204ENST00000467044 LMNB1P20700 586 aa13.03□□□□□ -0.32
NUP188-204ENST00000467044 PIH1D3Q9NQM4 214 aaKnown RBP13.03□□□□□ -0.32
NUP188-204ENST00000467044 KCNQ5Q9NR82 932 aa13.03□□□□□ -0.32
NUP188-204ENST00000467044 LRP2BPQ9P2M1 347 aa13.03□□□□□ -0.32
NUP188-204ENST00000467044 ZNRF3Q9ULT6 936 aa13.03□□□□□ -0.32
NUP188-204ENST00000467044 COL1A1P02452 1464 aaPredicted RBP13.03□□□□□ -0.32
NUP188-204ENST00000467044 USP17L3A6NCW0 530 aa13.02□□□□□ -0.33
NUP188-204ENST00000467044 USP17L4A6NCW7 530 aa13.02□□□□□ -0.33
NUP188-204ENST00000467044 DCAF8L1A6NGE4 600 aa13.02□□□□□ -0.33
NUP188-204ENST00000467044 YDJCA8MPS7 323 aa13.02□□□□□ -0.33
NUP188-204ENST00000467044 IDH1O75874 414 aaKnown RBP13.02□□□□□ -0.33
NUP188-204ENST00000467044 RAD17O75943 681 aa13.02□□□□□ -0.33
NUP188-204ENST00000467044 PRELPP51888 382 aa13.02□□□□□ -0.33
NUP188-204ENST00000467044 USP17L1Q7RTZ2 530 aa13.02□□□□□ -0.33
NUP188-204ENST00000467044 KBTBD3Q8NAB2 608 aa13.02□□□□□ -0.33
NUP188-204ENST00000467044 RAI14Q9P0K7 980 aa13.02□□□□□ -0.33
NUP188-204ENST00000467044 FAM205AQ6ZU69 1335 aa13.02□□□□□ -0.33
NUP188-204ENST00000467044 SBF1O95248 1867 aa13.02□□□□□ -0.33
NUP188-204ENST00000467044 MYO5AQ9Y4I1 1855 aaKnown RBP13.02□□□□□ -0.33
NUP188-204ENST00000467044 ZBTB22O15209 634 aa13.01□□□□□ -0.33
NUP188-204ENST00000467044 MFSD14BQ5SR56 506 aa13.01□□□□□ -0.33
NUP188-204ENST00000467044 STRIP1Q5VSL9 837 aa13.01□□□□□ -0.33
NUP188-204ENST00000467044 SPTY2D1Q68D10 685 aaPredicted RBP13.01□□□□□ -0.33
NUP188-204ENST00000467044 ERICH6Q7L0X2 663 aa13.01□□□□□ -0.33
NUP188-204ENST00000467044 ZGPATQ8N5A5 531 aaKnown RBP13.01□□□□□ -0.33
NUP188-204ENST00000467044 TBC1D22AQ8WUA7 517 aa13.01□□□□□ -0.33
NUP188-204ENST00000467044 RNF181Q9P0P0 153 aa13.01□□□□□ -0.33
NUP188-204ENST00000467044 PDS5AQ29RF7 1337 aaKnown RBP13.01□□□□□ -0.33
NUP188-204ENST00000467044 COL4A5P29400 1685 aa13.01□□□□□ -0.33
NUP188-204ENST00000467044 SCN9AQ15858 1988 aa13.01□□□□□ -0.33
NUP188-204ENST00000467044 CDC45O75419 566 aa13□□□□□ -0.33
NUP188-204ENST00000467044 LDHBP07195 334 aaKnown RBP13□□□□□ -0.33
NUP188-204ENST00000467044 EIF6P56537 245 aaKnown RBP13□□□□□ -0.33
NUP188-204ENST00000467044 MAP3K12Q12852 859 aa13□□□□□ -0.33
NUP188-204ENST00000467044 LRRFIP1Q32MZ4 808 aaKnown RBP13□□□□□ -0.33
NUP188-204ENST00000467044 ZSCAN25Q6NSZ9 544 aa13□□□□□ -0.33
NUP188-204ENST00000467044 MXD3Q9BW11 206 aa13□□□□□ -0.33
NUP188-204ENST00000467044 DDX24Q9GZR7 859 aaKnown RBP eCLIP13□□□□□ -0.333e-6■■□□□ 13.3
NUP188-204ENST00000467044 SRCAPQ6ZRS2 3230 aa13□□□□□ -0.33
NUP188-204ENST00000467044 GOLGB1Q14789 3259 aaKnown RBP13□□□□□ -0.33
NUP188-204ENST00000467044 SALL1Q9NSC2 1324 aa12.99□□□□□ -0.33
NUP188-204ENST00000467044 F8W031 263 aaPredicted RBP12.99□□□□□ -0.33
NUP188-204ENST00000467044 PSMD14O00487 310 aa12.99□□□□□ -0.33
NUP188-204ENST00000467044 PRDX5P30044 214 aa12.99□□□□□ -0.33
NUP188-204ENST00000467044 CXCL9Q07325 125 aa12.99□□□□□ -0.33
NUP188-204ENST00000467044 DACT2Q5SW24 774 aa12.99□□□□□ -0.33
NUP188-204ENST00000467044 SLC9C2Q5TAH2 1124 aa12.99□□□□□ -0.33
NUP188-204ENST00000467044 C9orf131Q5VYM1 1079 aa12.99□□□□□ -0.33
NUP188-204ENST00000467044 CIAPIN1Q6FI81 312 aa12.99□□□□□ -0.33
NUP188-204ENST00000467044 DIAPH3Q9NSV4 1193 aa12.99□□□□□ -0.33
NUP188-204ENST00000467044 DICER1Q9UPY3 1922 aaKnown RBP12.99□□□□□ -0.33
NUP188-204ENST00000467044 MYH7P12883 1935 aa12.98□□□□□ -0.33
NUP188-204ENST00000467044 HIP1O00291 1037 aa12.98□□□□□ -0.33
NUP188-204ENST00000467044 RNF113AO15541 343 aaKnown RBP12.98□□□□□ -0.33
NUP188-204ENST00000467044 TNIP1Q15025 636 aa12.98□□□□□ -0.33
NUP188-204ENST00000467044 GRIK5Q16478 980 aa12.98□□□□□ -0.33
NUP188-204ENST00000467044 SLFNL1Q499Z3 407 aa12.98□□□□□ -0.33
NUP188-204ENST00000467044 CASC1Q6TDU7 716 aa12.98□□□□□ -0.33
NUP188-204ENST00000467044 DZIP1Q86YF9 867 aaKnown RBP12.98□□□□□ -0.33
NUP188-204ENST00000467044 CERS5Q8N5B7 392 aa12.98□□□□□ -0.33
NUP188-204ENST00000467044 MAGEB6Q8N7X4 407 aa12.98□□□□□ -0.33
NUP188-204ENST00000467044 GJA3Q9Y6H8 435 aa12.98□□□□□ -0.33
NUP188-204ENST00000467044 DOCK2Q92608 1830 aa12.97□□□□□ -0.33
NUP188-204ENST00000467044 FZD9O00144 591 aa12.97□□□□□ -0.33
NUP188-204ENST00000467044 CHGBP05060 677 aa12.97□□□□□ -0.33
NUP188-204ENST00000467044 ZFYP08048 801 aaPredicted RBP12.97□□□□□ -0.33
NUP188-204ENST00000467044 VIL1P09327 827 aaKnown RBP12.97□□□□□ -0.33
NUP188-204ENST00000467044 PDE6AP16499 860 aa12.97□□□□□ -0.33
NUP188-204ENST00000467044 CYP7A1P22680 504 aa12.97□□□□□ -0.33
NUP188-204ENST00000467044 CHMLP26374 656 aa12.97□□□□□ -0.33
NUP188-204ENST00000467044 ADD2P35612 726 aa12.97□□□□□ -0.33
NUP188-204ENST00000467044 FKBP1AP62942 108 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms