RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TTLL5Q6EMB2 1281 aa15.12■□□□□ 0.01
PDZRN3-205ENST00000466780 MAST3O60307 1309 aa15.12■□□□□ 0.01
PDZRN3-205ENST00000466780 SMC2O95347 1197 aa15.12■□□□□ 0.01
PDZRN3-205ENST00000466780 NCAPHQ15003 741 aa15.12■□□□□ 0.01
PDZRN3-205ENST00000466780 CCDC93Q567U6 631 aa15.12■□□□□ 0.01
PDZRN3-205ENST00000466780 LMBR1LQ6UX01 489 aa15.12■□□□□ 0.01
PDZRN3-205ENST00000466780 SYT10Q6XYQ8 523 aa15.12■□□□□ 0.01
PDZRN3-205ENST00000466780 ATG9AQ7Z3C6 839 aa15.12■□□□□ 0.01
PDZRN3-205ENST00000466780 ST7Q9NRC1 585 aa15.12■□□□□ 0.01
PDZRN3-205ENST00000466780 TIMM10P62072 90 aa15.11■□□□□ 0.01
PDZRN3-205ENST00000466780 ERCC6LQ2NKX8 1250 aa15.11■□□□□ 0.01
PDZRN3-205ENST00000466780 CCDC150Q8NCX0 1101 aa15.11■□□□□ 0.01
PDZRN3-205ENST00000466780 NEUROD6Q96NK8 337 aa15.11■□□□□ 0.01
PDZRN3-205ENST00000466780 BIN1O00499 593 aa15.11■□□□□ 0.01
PDZRN3-205ENST00000466780 POLR3DP05423 398 aaPredicted RBP15.11■□□□□ 0.01
PDZRN3-205ENST00000466780 H2AFXP16104 143 aaPredicted RBP15.11■□□□□ 0.01
PDZRN3-205ENST00000466780 SCN11AQ9UI33 1791 aa15.1■□□□□ 0.01
PDZRN3-205ENST00000466780 PSDA5PKW4 1024 aaPredicted RBP15.1■□□□□ 0.01
PDZRN3-205ENST00000466780 EVCP57679 992 aa15.1■□□□□ 0.01
PDZRN3-205ENST00000466780 STK38Q15208 465 aa15.1■□□□□ 0.01
PDZRN3-205ENST00000466780 SFPQP23246 707 aaKnown RBP eCLIP15.1■□□□□ 0.01
PDZRN3-205ENST00000466780 FOXO4P98177 505 aa15.1■□□□□ 0.01
PDZRN3-205ENST00000466780 FMNL2Q96PY5 1086 aa15.1■□□□□ 0.01
PDZRN3-205ENST00000466780 GJB4Q9NTQ9 266 aa15.1■□□□□ 0.01
PDZRN3-205ENST00000466780 NLRP2Q9NX02 1062 aa15.1■□□□□ 0.01
PDZRN3-205ENST00000466780 M0R2C6 588 aa15.09■□□□□ 0.01
PDZRN3-205ENST00000466780 YEATS4O95619 227 aa15.09■□□□□ 0.01
PDZRN3-205ENST00000466780 KCNJ6P48051 423 aa15.09■□□□□ 0.01
PDZRN3-205ENST00000466780 SF3A1Q15459 793 aaKnown RBP15.09■□□□□ 0.01
PDZRN3-205ENST00000466780 POLR3EQ9NVU0 708 aa15.09■□□□□ 0.01
PDZRN3-205ENST00000466780 ARFGEF2Q9Y6D5 1785 aa15.09■□□□□ 0.01
PDZRN3-205ENST00000466780 RGPD5Q99666 1765 aa15.09■□□□□ 0.01
PDZRN3-205ENST00000466780 SPTLC2O15270 562 aa15.09■□□□□ 0.01
PDZRN3-205ENST00000466780 SLC3A2P08195 630 aaKnown RBP15.09■□□□□ 0.01
PDZRN3-205ENST00000466780 NLRP12P59046 1061 aa15.09■□□□□ 0.01
PDZRN3-205ENST00000466780 FBXL16Q8N461 479 aa15.09■□□□□ 0.01
PDZRN3-205ENST00000466780 KCNG4Q8TDN1 519 aa15.09■□□□□ 0.01
PDZRN3-205ENST00000466780 HSD3B7Q9H2F3 369 aa15.09■□□□□ 0.01
PDZRN3-205ENST00000466780 RNF113AO15541 343 aaKnown RBP15.08■□□□□ 0.01
PDZRN3-205ENST00000466780 ZNF202O95125 648 aa15.08■□□□□ 0.01
PDZRN3-205ENST00000466780 SNRPA1P09661 255 aaKnown RBP15.08■□□□□ 0.01
PDZRN3-205ENST00000466780 AXDND1Q5T1B0 1012 aaPredicted RBP15.08■□□□□ 0.01
PDZRN3-205ENST00000466780 MYSM1Q5VVJ2 828 aa15.08■□□□□ 0.01
PDZRN3-205ENST00000466780 RAPGEF4Q8WZA2 1011 aa15.08■□□□□ 0.01
PDZRN3-205ENST00000466780 C8orf76Q96K31 380 aa15.08■□□□□ 0.01
PDZRN3-205ENST00000466780 KIF28PB7ZC32 967 aa15.08■□□□□ 0
PDZRN3-205ENST00000466780 FOXP2O15409 715 aa15.08■□□□□ 0
PDZRN3-205ENST00000466780 PHKG2P15735 406 aa15.08■□□□□ 0
PDZRN3-205ENST00000466780 ZRSR1Q15695 479 aaKnown RBP15.08■□□□□ 0
PDZRN3-205ENST00000466780 FBXO18Q8NFZ0 1043 aa15.08■□□□□ 0
PDZRN3-205ENST00000466780 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.08■□□□□ 0
PDZRN3-205ENST00000466780 TAF3Q5VWG9 929 aa15.08■□□□□ 0
PDZRN3-205ENST00000466780 HPS5Q9UPZ3 1129 aa15.08■□□□□ 0
PDZRN3-205ENST00000466780 ATP1A3P13637 1013 aa15.07■□□□□ 0
PDZRN3-205ENST00000466780 LMOD1P29536 600 aaPredicted RBP15.07■□□□□ 0
PDZRN3-205ENST00000466780 CLCN6P51797 869 aa15.07■□□□□ 0
PDZRN3-205ENST00000466780 DDX17Q92841 729 aaKnown RBP15.07■□□□□ 0
PDZRN3-205ENST00000466780 OSBP2Q969R2 916 aa15.07■□□□□ 0
PDZRN3-205ENST00000466780 NWD2Q9ULI1 1742 aa15.07■□□□□ 0
PDZRN3-205ENST00000466780 PFKFB1P16118 471 aa15.07■□□□□ 0
PDZRN3-205ENST00000466780 FANCCQ00597 558 aa15.07■□□□□ 0
PDZRN3-205ENST00000466780 GPR108Q9NPR9 543 aa15.07■□□□□ 0
PDZRN3-205ENST00000466780 FHOD1Q9Y613 1164 aa15.07■□□□□ 0
PDZRN3-205ENST00000466780 MROH7-TTC4A0A0A0MT08 1334 aa15.06■□□□□ 0
PDZRN3-205ENST00000466780 H7C1W4 665 aa15.06■□□□□ 0
PDZRN3-205ENST00000466780 FANCGO15287 622 aa15.06■□□□□ 0
PDZRN3-205ENST00000466780 IFIT1P09914 478 aaKnown RBP15.06■□□□□ 0
PDZRN3-205ENST00000466780 CSB-PGBD3P0DP91 1061 aa15.06■□□□□ 0
PDZRN3-205ENST00000466780 HAND2P61296 217 aa15.06■□□□□ 0
PDZRN3-205ENST00000466780 LRRC24Q50LG9 513 aa15.06■□□□□ 0
PDZRN3-205ENST00000466780 ISM2Q6H9L7 571 aa15.06■□□□□ 0
PDZRN3-205ENST00000466780 TICAM2Q86XR7 235 aa15.06■□□□□ 0
PDZRN3-205ENST00000466780 RAB11FIP4Q86YS3 637 aa15.06■□□□□ 0
PDZRN3-205ENST00000466780 CHMP4CQ96CF2 233 aa15.06■□□□□ 0
PDZRN3-205ENST00000466780 ORC3Q9UBD5 711 aaPredicted RBP15.06■□□□□ 0
PDZRN3-205ENST00000466780 WDHD1O75717 1129 aaPredicted RBP15.06■□□□□ 0
PDZRN3-205ENST00000466780 PLBD2Q8NHP8 589 aa15.06■□□□□ 0
PDZRN3-205ENST00000466780 DPF2Q92785 391 aa15.06■□□□□ 0
PDZRN3-205ENST00000466780 KLF18A0A0U1RQI7 1052 aa15.05■□□□□ 0
PDZRN3-205ENST00000466780 CMA1P23946 247 aa15.05■□□□□ 0
PDZRN3-205ENST00000466780 ETF1P62495 437 aaKnown RBP15.05■□□□□ 0
PDZRN3-205ENST00000466780 ANO1Q5XXA6 986 aa15.05■□□□□ 0
PDZRN3-205ENST00000466780 BRAPQ7Z569 592 aa15.05■□□□□ 0
PDZRN3-205ENST00000466780 IKBKBO14920 756 aa15.05■□□□□ -0
PDZRN3-205ENST00000466780 PRC1O43663 620 aa15.05■□□□□ -0
PDZRN3-205ENST00000466780 TPM4P67936 248 aa15.05■□□□□ -0
PDZRN3-205ENST00000466780 KIF23Q02241 960 aaPredicted RBP15.05■□□□□ -0
PDZRN3-205ENST00000466780 BMS1Q14692 1282 aaKnown RBP15.05■□□□□ -0
PDZRN3-205ENST00000466780 ARHGAP29Q52LW3 1261 aa15.05■□□□□ -0
PDZRN3-205ENST00000466780 TRIM65Q6PJ69 517 aa15.05■□□□□ -0
PDZRN3-205ENST00000466780 ZNF594Q96JF6 807 aaPredicted RBP15.05■□□□□ -0
PDZRN3-205ENST00000466780 GOLGA8BA8MQT2 603 aa15.04■□□□□ -0
PDZRN3-205ENST00000466780 IL15P40933 162 aaPredicted RBP15.04■□□□□ -0
PDZRN3-205ENST00000466780 ANTXR2P58335 489 aa15.04■□□□□ -0
PDZRN3-205ENST00000466780 MB21D2Q8IYB1 491 aaPredicted RBP15.04■□□□□ -0
PDZRN3-205ENST00000466780 TTC5Q8N0Z6 440 aa15.04■□□□□ -0
PDZRN3-205ENST00000466780 DNAI1Q9UI46 699 aa15.04■□□□□ -0
PDZRN3-205ENST00000466780 A0A1B0GUL7 405 aa15.04■□□□□ -0
PDZRN3-205ENST00000466780 HOMER1Q86YM7 354 aa15.04■□□□□ -0
PDZRN3-205ENST00000466780 C19orf44Q9H6X5 657 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms