RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 KCNQ5Q9NR82 932 aa19.59■□□□□ 0.73
GPC1-207ENST00000466624 COL1A1P02452 1464 aaPredicted RBP19.59■□□□□ 0.73
GPC1-207ENST00000466624 WDR90Q96KV7 1748 aa19.59■□□□□ 0.73
GPC1-207ENST00000466624 MYO3BQ8WXR4 1341 aa19.58■□□□□ 0.73
GPC1-207ENST00000466624 SALL3Q9BXA9 1300 aa19.58■□□□□ 0.73
GPC1-207ENST00000466624 GLTPD2A6NH11 291 aa19.58■□□□□ 0.72
GPC1-207ENST00000466624 PSMD14O00487 310 aa19.58■□□□□ 0.72
GPC1-207ENST00000466624 FRAT2O75474 233 aaPredicted RBP19.58■□□□□ 0.72
GPC1-207ENST00000466624 RAD17O75943 681 aa19.58■□□□□ 0.72
GPC1-207ENST00000466624 GTF2IP78347 998 aa19.58■□□□□ 0.72
GPC1-207ENST00000466624 DACT2Q5SW24 774 aa19.58■□□□□ 0.72
GPC1-207ENST00000466624 TTLL5Q6EMB2 1281 aa19.58■□□□□ 0.72
GPC1-207ENST00000466624 B4GALNT3Q6L9W6 998 aa19.58■□□□□ 0.72
GPC1-207ENST00000466624 SCN4AP35499 1836 aa19.58■□□□□ 0.72
GPC1-207ENST00000466624 RPS12P25398 132 aaKnown RBP19.57■□□□□ 0.72
GPC1-207ENST00000466624 RASGRF1Q13972 1273 aa19.57■□□□□ 0.72
GPC1-207ENST00000466624 TBC1D22AQ8WUA7 517 aa19.57■□□□□ 0.72
GPC1-207ENST00000466624 GPATCH3Q96I76 525 aa19.57■□□□□ 0.72
GPC1-207ENST00000466624 IQSEC3Q9UPP2 1182 aaPredicted RBP19.57■□□□□ 0.72
GPC1-207ENST00000466624 TTC41PQ6P2S7 1318 aa19.56■□□□□ 0.72
GPC1-207ENST00000466624 SALL1Q9NSC2 1324 aa19.56■□□□□ 0.72
GPC1-207ENST00000466624 RSBN1LQ6PCB5 846 aaPredicted RBP19.56■□□□□ 0.72
GPC1-207ENST00000466624 AGBL3Q8NEM8 1001 aa19.56■□□□□ 0.72
GPC1-207ENST00000466624 WDR66Q8TBY9 1149 aa19.56■□□□□ 0.72
GPC1-207ENST00000466624 L3MBTL3Q96JM7 780 aaPredicted RBP19.56■□□□□ 0.72
GPC1-207ENST00000466624 LNPKQ9C0E8 428 aa19.56■□□□□ 0.72
GPC1-207ENST00000466624 ECHDC1Q9NTX5 307 aa19.56■□□□□ 0.72
GPC1-207ENST00000466624 ATP5JP18859 108 aa19.55■□□□□ 0.72
GPC1-207ENST00000466624 MCAMP43121 646 aa19.55■□□□□ 0.72
GPC1-207ENST00000466624 C16orf71Q8IYS4 520 aaPredicted RBP19.55■□□□□ 0.72
GPC1-207ENST00000466624 SPATA5Q8NB90 893 aa19.55■□□□□ 0.72
GPC1-207ENST00000466624 HMG20BQ9P0W2 317 aa19.55■□□□□ 0.72
GPC1-207ENST00000466624 DOCK2Q92608 1830 aa19.55■□□□□ 0.72
GPC1-207ENST00000466624 DDNO94850 711 aaPredicted RBP19.54■□□□□ 0.72
GPC1-207ENST00000466624 MX1P20591 662 aa19.54■□□□□ 0.72
GPC1-207ENST00000466624 MMP14P50281 582 aa19.54■□□□□ 0.72
GPC1-207ENST00000466624 DPF2Q92785 391 aa19.54■□□□□ 0.72
GPC1-207ENST00000466624 GMLQ99445 158 aa19.54■□□□□ 0.72
GPC1-207ENST00000466624 BCL11AQ9H165 835 aa19.54■□□□□ 0.72
GPC1-207ENST00000466624 STAP2Q9UGK3 403 aa19.54■□□□□ 0.72
GPC1-207ENST00000466624 SUGT1Q9Y2Z0 365 aa19.54■□□□□ 0.72
GPC1-207ENST00000466624 GJA3Q9Y6H8 435 aa19.54■□□□□ 0.72
GPC1-207ENST00000466624 IGSF3O75054 1194 aa19.53■□□□□ 0.72
GPC1-207ENST00000466624 CHAF1AQ13111 956 aaPredicted RBP19.53■□□□□ 0.72
GPC1-207ENST00000466624 SCARF1Q14162 830 aa19.53■□□□□ 0.72
GPC1-207ENST00000466624 MFSD14BQ5SR56 506 aa19.53■□□□□ 0.72
GPC1-207ENST00000466624 ZGPATQ8N5A5 531 aaKnown RBP19.53■□□□□ 0.72
GPC1-207ENST00000466624 FBXW7Q969H0 707 aa19.53■□□□□ 0.72
GPC1-207ENST00000466624 AOX1Q06278 1338 aa19.52■□□□□ 0.72
GPC1-207ENST00000466624 ERC2O15083 957 aa19.52■□□□□ 0.72
GPC1-207ENST00000466624 CERS5Q8N5B7 392 aa19.52■□□□□ 0.72
GPC1-207ENST00000466624 OTUD7AQ8TE49 926 aaPredicted RBP19.52■□□□□ 0.72
GPC1-207ENST00000466624 MAST2Q6P0Q8 1798 aa19.52■□□□□ 0.71
GPC1-207ENST00000466624 MYO5AQ9Y4I1 1855 aaKnown RBP19.52■□□□□ 0.71
GPC1-207ENST00000466624 GMPSP49915 693 aaPredicted RBP19.51■□□□□ 0.71
GPC1-207ENST00000466624 SCNN1DP51172 638 aa19.51■□□□□ 0.71
GPC1-207ENST00000466624 PI16Q6UXB8 463 aa19.51■□□□□ 0.71
GPC1-207ENST00000466624 OSBPL3Q9H4L5 887 aa19.51■□□□□ 0.71
GPC1-207ENST00000466624 JAG2Q9Y219 1238 aa19.51■□□□□ 0.71
GPC1-207ENST00000466624 ZBTB12Q9Y330 459 aaPredicted RBP19.51■□□□□ 0.71
GPC1-207ENST00000466624 GLRX3O76003 335 aaKnown RBP19.5■□□□□ 0.71
GPC1-207ENST00000466624 PDE1AP54750 535 aa19.5■□□□□ 0.71
GPC1-207ENST00000466624 PLEKHM2Q8IWE5 1019 aa19.5■□□□□ 0.71
GPC1-207ENST00000466624 PI4K2BQ8TCG2 481 aa19.5■□□□□ 0.71
GPC1-207ENST00000466624 HAUS7Q99871 368 aa19.5■□□□□ 0.71
GPC1-207ENST00000466624 GPRC5DQ9NZD1 345 aa19.5■□□□□ 0.71
GPC1-207ENST00000466624 MYH7P12883 1935 aa19.49■□□□□ 0.71
GPC1-207ENST00000466624 IQCA1LA6NCM1 817 aa19.49■□□□□ 0.71
GPC1-207ENST00000466624 CYP2E1P05181 493 aaPredicted RBP19.49■□□□□ 0.71
GPC1-207ENST00000466624 ZAP70P43403 619 aa19.49■□□□□ 0.71
GPC1-207ENST00000466624 SPTY2D1Q68D10 685 aaPredicted RBP19.49■□□□□ 0.71
GPC1-207ENST00000466624 MXD3Q9BW11 206 aa19.49■□□□□ 0.71
GPC1-207ENST00000466624 MAST3O60307 1309 aa19.49■□□□□ 0.71
GPC1-207ENST00000466624 USP17L8P0C7I0 530 aa19.48■□□□□ 0.71
GPC1-207ENST00000466624 YY1P25490 414 aa19.48■□□□□ 0.71
GPC1-207ENST00000466624 PDE4AP27815 886 aa19.48■□□□□ 0.71
GPC1-207ENST00000466624 LMOD1P29536 600 aaPredicted RBP19.48■□□□□ 0.71
GPC1-207ENST00000466624 ZNF280AP59817 542 aaPredicted RBP19.48■□□□□ 0.71
GPC1-207ENST00000466624 TTF1Q15361 905 aaPredicted RBP19.48■□□□□ 0.71
GPC1-207ENST00000466624 BOLA2Q9H3K6 86 aa19.48■□□□□ 0.71
GPC1-207ENST00000466624 SNRKQ9NRH2 765 aa19.48■□□□□ 0.71
GPC1-207ENST00000466624 MYH2Q9UKX2 1941 aa19.47■□□□□ 0.71
GPC1-207ENST00000466624 ECM29Q5VYK3 1845 aa19.47■□□□□ 0.71
GPC1-207ENST00000466624 LDHBP07195 334 aaKnown RBP19.47■□□□□ 0.71
GPC1-207ENST00000466624 HDLBPQ00341 1268 aaKnown RBP19.47■□□□□ 0.71
GPC1-207ENST00000466624 OGFOD1Q8N543 542 aa19.47■□□□□ 0.71
GPC1-207ENST00000466624 MRIQ9BWK5 157 aa19.47■□□□□ 0.71
GPC1-207ENST00000466624 CNOT7Q9UIV1 285 aaKnown RBP19.47■□□□□ 0.71
GPC1-207ENST00000466624 HACL1Q9UJ83 578 aa19.47■□□□□ 0.71
GPC1-207ENST00000466624 HDAC9Q9UKV0 1011 aa19.47■□□□□ 0.71
GPC1-207ENST00000466624 POTECB2RU33 542 aa19.46■□□□□ 0.71
GPC1-207ENST00000466624 H7C1D1 291 aa19.46■□□□□ 0.71
GPC1-207ENST00000466624 PRDX5P30044 214 aa19.46■□□□□ 0.71
GPC1-207ENST00000466624 TSHZ3Q63HK5 1081 aa19.46■□□□□ 0.71
GPC1-207ENST00000466624 TMED8Q6PL24 325 aaPredicted RBP19.46■□□□□ 0.71
GPC1-207ENST00000466624 ERICH6Q7L0X2 663 aa19.46■□□□□ 0.71
GPC1-207ENST00000466624 KIAA0825Q8IV33 1275 aa19.46■□□□□ 0.71
GPC1-207ENST00000466624 MICALL2Q8IY33 904 aa19.46■□□□□ 0.71
GPC1-207ENST00000466624 DNAJC2Q99543 621 aaKnown RBP19.46■□□□□ 0.71
GPC1-207ENST00000466624 PAG1Q9NWQ8 432 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms