RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 FAM76AQ8TAV0 307 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 BABAM1Q9NWV8 329 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 ADGRB3O60242 1522 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 AKAP12Q02952 1782 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 AATKQ6ZMQ8 1374 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 GOLGA6L7A0A1B0GV03 622 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 OPA1O60313 960 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 ARHGAP25P42331 645 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 PIP4K2AP48426 406 aaPredicted RBP4.44□□□□□ -1.7
CCNL1-204ENST00000464316 GYS2P54840 703 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 ADCK5Q3MIX3 580 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 AACSQ86V21 672 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 CCDC50Q8IVM0 306 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 OTUD6BQ8N6M0 293 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 PI4K2BQ8TCG2 481 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 RPGRIP1Q96KN7 1286 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 VIPAS39Q9H9C1 493 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 FAN1Q9Y2M0 1017 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 MRFAP1Q9Y605 127 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 PARP3Q9Y6F1 533 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 MST1RQ04912 1400 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 MAP2K7O14733 419 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 SPTLC2O15270 562 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 CPP00450 1065 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 PTH1RQ03431 593 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 E2F4Q16254 413 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 HDGFL1Q5TGJ6 251 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 RSRC2Q7L4I2 434 aaKnown RBP4.43□□□□□ -1.7
CCNL1-204ENST00000464316 G2E3Q7L622 706 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 BRAPQ7Z569 592 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 FMNL3Q8IVF7 1028 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 DDX54Q8TDD1 881 aaKnown RBP4.43□□□□□ -1.7
CCNL1-204ENST00000464316 ANKRD24Q8TF21 1146 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 ZBTB9Q96C00 473 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 SYTL4Q96C24 671 aaPredicted RBP4.43□□□□□ -1.7
CCNL1-204ENST00000464316 ZSWIM4Q9H7M6 989 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 TTF2Q9UNY4 1162 aaKnown RBP4.43□□□□□ -1.7
CCNL1-204ENST00000464316 POGZQ7Z3K3 1410 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 A0A1B0GUA9 196 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 BIN1O00499 593 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 ERCC3P19447 782 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 SYKP43405 635 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 SATB1Q01826 763 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 CKAP4Q07065 602 aaKnown RBP4.43□□□□□ -1.7
CCNL1-204ENST00000464316 NEDD9Q14511 834 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 TSGA10IPQ3SY00 556 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 CCDC102BQ68D86 513 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 SPECC1LQ69YQ0 1117 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 VSTM4Q8IW00 320 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 REXO1L1PQ8IX06 675 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 USP44Q9H0E7 712 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 FAM204AQ9H8W3 233 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 RTEL1Q9NZ71 1219 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 MYO1AQ9UBC5 1043 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 LCMT1Q9UIC8 334 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 ARHGAP23Q9P227 1491 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 TMCO5BA8MYB1 307 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 PATL2C9JE40 543 aaKnown RBP4.43□□□□□ -1.7
CCNL1-204ENST00000464316 PHACTR2O75167 634 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 USP5P45974 858 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 CASP8Q14790 479 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 PACS2Q86VP3 889 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 C8orf76Q96K31 380 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 CABS1Q96KC9 395 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 CTAGE1Q96RT6 745 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 PUF60Q9UHX1 559 aaKnown RBP4.43□□□□□ -1.7
CCNL1-204ENST00000464316 USP42Q9H9J4 1324 aaKnown RBP4.43□□□□□ -1.7
CCNL1-204ENST00000464316 LMO7Q8WWI1 1683 aa4.43□□□□□ -1.7
CCNL1-204ENST00000464316 A0A1B0GVL5 298 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 CUTAO60888 179 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 SASH3O75995 380 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 ZNF202O95125 648 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 EZRP15311 586 aaKnown RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 CMA1P23946 247 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 HDGFP51858 240 aaKnown RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 AKAP17AQ02040 695 aaKnown RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 NMIQ13287 307 aaPredicted RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 TRIM29Q14134 588 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 SART3Q15020 963 aaKnown RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 SKIDA1Q1XH10 827 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 HSP90AB3PQ58FF7 597 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 LRCH2Q5VUJ6 765 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 KANK3Q6NY19 840 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 TRIM65Q6PJ69 517 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 PLPPR3Q6T4P5 718 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 Q6ZUG5 572 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 DHX32Q7L7V1 743 aaKnown RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 NUTM2AQ8IVF1 878 aaPredicted RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 EHBP1Q8NDI1 1231 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 USP28Q96RU2 1077 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 NAPGQ99747 312 aaPredicted RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 SIL1Q9H173 461 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 CCDC61Q9Y6R9 512 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 AKR1B15C9JRZ8 316 aaPredicted RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 CHUKO15111 745 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 PFKFB2O60825 505 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 PPFIA1Q13136 1202 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 STIM1Q13586 685 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 POLA2Q14181 598 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 RRS1Q15050 365 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms