RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 HELLSQ9NRZ9 838 aa18.6■□□□□ 0.57
GYPC-205ENST00000464053 ZNF219Q9P2Y4 722 aaPredicted RBP18.6■□□□□ 0.57
GYPC-205ENST00000464053 DENND2AQ9ULE3 1009 aa18.6■□□□□ 0.57
GYPC-205ENST00000464053 M0R2C6 588 aa18.59■□□□□ 0.57
GYPC-205ENST00000464053 FRAT2O75474 233 aaPredicted RBP18.59■□□□□ 0.57
GYPC-205ENST00000464053 ZFYP08048 801 aaPredicted RBP18.59■□□□□ 0.57
GYPC-205ENST00000464053 DPEP1P16444 411 aa18.59■□□□□ 0.57
GYPC-205ENST00000464053 KCNA3P22001 575 aa18.59■□□□□ 0.57
GYPC-205ENST00000464053 ADD2P35612 726 aa18.59■□□□□ 0.57
GYPC-205ENST00000464053 SLC9C2Q5TAH2 1124 aa18.59■□□□□ 0.57
GYPC-205ENST00000464053 SGIP1Q9BQI5 828 aa18.59■□□□□ 0.57
GYPC-205ENST00000464053 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.59■□□□□ 0.57
GYPC-205ENST00000464053 PALD1Q9ULE6 856 aa18.59■□□□□ 0.57
GYPC-205ENST00000464053 MAST3O60307 1309 aa18.59■□□□□ 0.57
GYPC-205ENST00000464053 CCDC171Q6TFL3 1326 aa18.59■□□□□ 0.57
GYPC-205ENST00000464053 KIAA1551Q9HCM1 1747 aa18.58■□□□□ 0.57
GYPC-205ENST00000464053 SEMA3EO15041 775 aa18.58■□□□□ 0.57
GYPC-205ENST00000464053 DPP8Q6V1X1 898 aaPredicted RBP18.58■□□□□ 0.57
GYPC-205ENST00000464053 C7orf43Q8WVR3 580 aa18.58■□□□□ 0.57
GYPC-205ENST00000464053 EPB41L2O43491 1005 aaKnown RBP18.58■□□□□ 0.56
GYPC-205ENST00000464053 PDE6AP16499 860 aa18.58■□□□□ 0.56
GYPC-205ENST00000464053 WASHC4Q2M389 1173 aa18.58■□□□□ 0.56
GYPC-205ENST00000464053 LRRFIP1Q32MZ4 808 aaKnown RBP18.58■□□□□ 0.56
GYPC-205ENST00000464053 ZNF804AQ7Z570 1209 aa18.58■□□□□ 0.56
GYPC-205ENST00000464053 TDRD7Q8NHU6 1098 aaKnown RBP18.58■□□□□ 0.56
GYPC-205ENST00000464053 PUS7LQ9H0K6 701 aaKnown RBP18.58■□□□□ 0.56
GYPC-205ENST00000464053 JAG2Q9Y219 1238 aa18.58■□□□□ 0.56
GYPC-205ENST00000464053 TCRBV5S4A2TA0A5A2 114 aa18.57■□□□□ 0.56
GYPC-205ENST00000464053 HSPA4P34932 840 aa18.57■□□□□ 0.56
GYPC-205ENST00000464053 CHAF1AQ13111 956 aaPredicted RBP18.57■□□□□ 0.56
GYPC-205ENST00000464053 ZSCAN25Q6NSZ9 544 aa18.57■□□□□ 0.56
GYPC-205ENST00000464053 IPO9Q96P70 1041 aaKnown RBP18.57■□□□□ 0.56
GYPC-205ENST00000464053 ABCF2Q9UG63 623 aa18.57■□□□□ 0.56
GYPC-205ENST00000464053 ZNF532Q9HCE3 1301 aa18.57■□□□□ 0.56
GYPC-205ENST00000464053 RIMBP2O15034 1052 aa18.56■□□□□ 0.56
GYPC-205ENST00000464053 MAP3K12Q12852 859 aa18.56■□□□□ 0.56
GYPC-205ENST00000464053 MAGEB6Q8N7X4 407 aa18.56■□□□□ 0.56
GYPC-205ENST00000464053 APPBP2Q92624 585 aa18.56■□□□□ 0.56
GYPC-205ENST00000464053 MAP4K1Q92918 833 aa18.56■□□□□ 0.56
GYPC-205ENST00000464053 TMX4Q9H1E5 349 aaPredicted RBP18.56■□□□□ 0.56
GYPC-205ENST00000464053 CD209Q9NNX6 404 aa18.56■□□□□ 0.56
GYPC-205ENST00000464053 LRP2BPQ9P2M1 347 aa18.56■□□□□ 0.56
GYPC-205ENST00000464053 PDS5AQ29RF7 1337 aaKnown RBP18.56■□□□□ 0.56
GYPC-205ENST00000464053 PTGER2P43116 358 aa18.56■□□□□ 0.56
GYPC-205ENST00000464053 UBE3CQ15386 1083 aa18.56■□□□□ 0.56
GYPC-205ENST00000464053 VPS53Q5VIR6 699 aa18.56■□□□□ 0.56
GYPC-205ENST00000464053 ZBTB22O15209 634 aa18.55■□□□□ 0.56
GYPC-205ENST00000464053 MCCP23508 829 aa18.55■□□□□ 0.56
GYPC-205ENST00000464053 TTLL6Q8N841 843 aa18.55■□□□□ 0.56
GYPC-205ENST00000464053 RBM8AQ9Y5S9 174 aaKnown RBP18.55■□□□□ 0.56
GYPC-205ENST00000464053 CHD4Q14839 1912 aa18.55■□□□□ 0.56
GYPC-205ENST00000464053 C21orf2O43822 256 aa18.54■□□□□ 0.56
GYPC-205ENST00000464053 IL1R1P14778 569 aa18.54■□□□□ 0.56
GYPC-205ENST00000464053 SNED1Q8TER0 1413 aa18.54■□□□□ 0.56
GYPC-205ENST00000464053 NECTIN1Q15223 517 aa18.53■□□□□ 0.56
GYPC-205ENST00000464053 RASEFQ8IZ41 740 aa18.53■□□□□ 0.56
GYPC-205ENST00000464053 DDRGK1Q96HY6 314 aa18.53■□□□□ 0.56
GYPC-205ENST00000464053 RAI14Q9P0K7 980 aa18.53■□□□□ 0.56
GYPC-205ENST00000464053 PPP1R1BQ9UD71 204 aaPredicted RBP18.53■□□□□ 0.56
GYPC-205ENST00000464053 TGFB2P61812 414 aa18.53■□□□□ 0.56
GYPC-205ENST00000464053 ZNF384Q8TF68 577 aa18.53■□□□□ 0.56
GYPC-205ENST00000464053 ZC3H12CQ9C0D7 883 aaKnown RBP18.53■□□□□ 0.56
GYPC-205ENST00000464053 ADGRA1Q86SQ6 560 aa18.52■□□□□ 0.56
GYPC-205ENST00000464053 SNX14Q9Y5W7 946 aa18.52■□□□□ 0.56
GYPC-205ENST00000464053 GOLGB1Q14789 3259 aaKnown RBP18.52■□□□□ 0.55
GYPC-205ENST00000464053 FOXP2O15409 715 aa18.51■□□□□ 0.55
GYPC-205ENST00000464053 GPAA1O43292 621 aa18.51■□□□□ 0.55
GYPC-205ENST00000464053 HSPD1P10809 573 aaKnown RBP18.51■□□□□ 0.55
GYPC-205ENST00000464053 PRDX5P30044 214 aa18.51■□□□□ 0.55
GYPC-205ENST00000464053 SLC4A3P48751 1232 aa18.51■□□□□ 0.55
GYPC-205ENST00000464053 KLHL34Q8N239 644 aa18.51■□□□□ 0.55
GYPC-205ENST00000464053 RTFDC1Q9BY42 306 aaPredicted RBP18.51■□□□□ 0.55
GYPC-205ENST00000464053 ANAPC15P60006 121 aa18.51■□□□□ 0.55
GYPC-205ENST00000464053 DOK7Q18PE1 504 aa18.51■□□□□ 0.55
GYPC-205ENST00000464053 CREB3L3Q68CJ9 461 aa18.51■□□□□ 0.55
GYPC-205ENST00000464053 ERICH6Q7L0X2 663 aa18.51■□□□□ 0.55
GYPC-205ENST00000464053 IL17RAQ96F46 866 aa18.51■□□□□ 0.55
GYPC-205ENST00000464053 COA1Q9GZY4 146 aa18.51■□□□□ 0.55
GYPC-205ENST00000464053 BRCA1P38398 1863 aaKnown RBP18.5■□□□□ 0.55
GYPC-205ENST00000464053 SALL1Q9NSC2 1324 aa18.5■□□□□ 0.55
GYPC-205ENST00000464053 CYP7A1P22680 504 aa18.5■□□□□ 0.55
GYPC-205ENST00000464053 MECOMQ03112 1051 aa18.5■□□□□ 0.55
GYPC-205ENST00000464053 RABEP1Q15276 862 aa18.5■□□□□ 0.55
GYPC-205ENST00000464053 GRIK5Q16478 980 aa18.5■□□□□ 0.55
GYPC-205ENST00000464053 WDR66Q8TBY9 1149 aa18.5■□□□□ 0.55
GYPC-205ENST00000464053 KCNB2Q92953 911 aa18.5■□□□□ 0.55
GYPC-205ENST00000464053 NSUN4Q96CB9 384 aaKnown RBP18.5■□□□□ 0.55
GYPC-205ENST00000464053 EYA3Q99504 573 aa18.5■□□□□ 0.55
GYPC-205ENST00000464053 DSCC1Q9BVC3 393 aa18.5■□□□□ 0.55
GYPC-205ENST00000464053 CCDC88AQ3V6T2 1871 aa18.49■□□□□ 0.55
GYPC-205ENST00000464053 SLC27A2O14975 620 aa18.49■□□□□ 0.55
GYPC-205ENST00000464053 CD2BP2O95400 341 aaKnown RBP18.49■□□□□ 0.55
GYPC-205ENST00000464053 CC2D2BQ6DHV5 1058 aa18.49■□□□□ 0.55
GYPC-205ENST00000464053 TBC1D2Q9BYX2 928 aa18.49■□□□□ 0.55
GYPC-205ENST00000464053 PIM2Q9P1W9 311 aa18.49■□□□□ 0.55
GYPC-205ENST00000464053 TAF6LQ9Y6J9 622 aa18.49■□□□□ 0.55
GYPC-205ENST00000464053 MIGA1Q8NAN2 632 aa18.49■□□□□ 0.55
GYPC-205ENST00000464053 STRBPQ96SI9 672 aaKnown RBP18.49■□□□□ 0.55
GYPC-205ENST00000464053 U3KPZ7 1027 aaPredicted RBP18.49■□□□□ 0.55
GYPC-205ENST00000464053 MAST2Q6P0Q8 1798 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms